RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 ANKLE2Q86XL3 938 aa26.89■■□□□ 1.9
DDX55-205ENST00000538744 RRP1P56182 461 aaKnown RBP26.87■■□□□ 1.89
DDX55-205ENST00000538744 NRKQ7Z2Y5 1582 aa26.87■■□□□ 1.89
DDX55-205ENST00000538744 DUSP27Q5VZP5 1158 aa26.85■■□□□ 1.89
DDX55-205ENST00000538744 MAP2P11137 1827 aaKnown RBP26.85■■□□□ 1.89
DDX55-205ENST00000538744 CHD2O14647 1828 aaKnown RBP26.85■■□□□ 1.89
DDX55-205ENST00000538744 SLFN5Q08AF3 891 aa26.85■■□□□ 1.89
DDX55-205ENST00000538744 PNPLA6Q8IY17 1366 aa26.84■■□□□ 1.89
DDX55-205ENST00000538744 PLEKHG3A1L390 1219 aa26.84■■□□□ 1.89
DDX55-205ENST00000538744 U2AF1L5P0DN76 240 aaPredicted RBP26.84■■□□□ 1.89
DDX55-205ENST00000538744 U2AF1Q01081 240 aaKnown RBP eCLIP26.84■■□□□ 1.89
DDX55-205ENST00000538744 NME9Q86XW9 330 aa26.82■■□□□ 1.88
DDX55-205ENST00000538744 NKTRP30414 1462 aaKnown RBP26.82■■□□□ 1.88
DDX55-205ENST00000538744 TRMT2AQ8IZ69 625 aaKnown RBP26.81■■□□□ 1.88
DDX55-205ENST00000538744 TCP11L2Q8N4U5 519 aa26.8■■□□□ 1.88
DDX55-205ENST00000538744 E9PSI1 815 aa26.79■■□□□ 1.88
DDX55-205ENST00000538744 KCNA6P17658 529 aa26.79■■□□□ 1.88
DDX55-205ENST00000538744 ACEP12821 1306 aa26.79■■□□□ 1.88
DDX55-205ENST00000538744 AATKQ6ZMQ8 1374 aa26.79■■□□□ 1.88
DDX55-205ENST00000538744 DIAPH1O60610 1272 aaKnown RBP26.79■■□□□ 1.88
DDX55-205ENST00000538744 NCBP3Q53F19 620 aaKnown RBP26.79■■□□□ 1.88
DDX55-205ENST00000538744 COG3Q96JB2 828 aa26.79■■□□□ 1.88
DDX55-205ENST00000538744 RGPD8O14715 1765 aaPredicted RBP26.79■■□□□ 1.88
DDX55-205ENST00000538744 WWC1Q8IX03 1113 aa26.78■■□□□ 1.88
DDX55-205ENST00000538744 POLKQ9UBT6 870 aa26.78■■□□□ 1.88
DDX55-205ENST00000538744 FMN2Q9NZ56 1722 aa26.77■■□□□ 1.88
DDX55-205ENST00000538744 NUTM2FA1L443 756 aa26.77■■□□□ 1.88
DDX55-205ENST00000538744 U2SURPO15042 1029 aaKnown RBP26.77■■□□□ 1.88
DDX55-205ENST00000538744 USP6P35125 1406 aa26.77■■□□□ 1.88
DDX55-205ENST00000538744 CDK12Q9NYV4 1490 aaPredicted RBP26.76■■□□□ 1.87
DDX55-205ENST00000538744 ANKARQ7Z5J8 1434 aa26.76■■□□□ 1.87
DDX55-205ENST00000538744 TTC21BQ7Z4L5 1316 aa26.75■■□□□ 1.87
DDX55-205ENST00000538744 CCDC27Q2M243 656 aa26.75■■□□□ 1.87
DDX55-205ENST00000538744 PHF23Q9BUL5 403 aaPredicted RBP26.75■■□□□ 1.87
DDX55-205ENST00000538744 ZRANB1Q9UGI0 708 aa26.74■■□□□ 1.87
DDX55-205ENST00000538744 SPINK5Q9NQ38 1064 aaPredicted RBP26.73■■□□□ 1.87
DDX55-205ENST00000538744 NPHP4O75161 1426 aaPredicted RBP26.73■■□□□ 1.87
DDX55-205ENST00000538744 RRP7AQ9Y3A4 280 aaKnown RBP26.73■■□□□ 1.87
DDX55-205ENST00000538744 NALCNQ8IZF0 1738 aa26.73■■□□□ 1.87
DDX55-205ENST00000538744 NEUROD2Q15784 382 aa26.72■■□□□ 1.87
DDX55-205ENST00000538744 B4GALNT3Q6L9W6 998 aa26.72■■□□□ 1.87
DDX55-205ENST00000538744 PNNQ9H307 717 aaKnown RBP26.72■■□□□ 1.87
DDX55-205ENST00000538744 WDR63Q8IWG1 891 aa26.7■■□□□ 1.87
DDX55-205ENST00000538744 PLEKHF1Q96S99 279 aa26.7■■□□□ 1.87
DDX55-205ENST00000538744 DMRT2Q9Y5R5 561 aa26.7■■□□□ 1.87
DDX55-205ENST00000538744 OVOS2A0A0J9YW53 1432 aa26.7■■□□□ 1.86
DDX55-205ENST00000538744 OVOS2Q6IE36 1432 aa26.7■■□□□ 1.86
DDX55-205ENST00000538744 SSH2Q76I76 1423 aa26.7■■□□□ 1.86
DDX55-205ENST00000538744 PPM1GO15355 546 aaPredicted RBP26.7■■□□□ 1.86
DDX55-205ENST00000538744 FBLN1P23142 703 aa26.7■■□□□ 1.86
DDX55-205ENST00000538744 MAPK8IP3Q9UPT6 1336 aa26.69■■□□□ 1.86
DDX55-205ENST00000538744 EMILIN1Q9Y6C2 1016 aa26.68■■□□□ 1.86
DDX55-205ENST00000538744 TTC21AQ8NDW8 1320 aa26.67■■□□□ 1.86
DDX55-205ENST00000538744 LRRC7Q96NW7 1537 aa26.67■■□□□ 1.86
DDX55-205ENST00000538744 NGDNQ8NEJ9 315 aaKnown RBP26.65■■□□□ 1.86
DDX55-205ENST00000538744 PMFBP1Q8TBY8 1022 aa26.65■■□□□ 1.86
DDX55-205ENST00000538744 FCHSD2O94868 740 aa26.65■■□□□ 1.86
DDX55-205ENST00000538744 CCDC136Q96JN2 1154 aa26.65■■□□□ 1.86
DDX55-205ENST00000538744 EXOC6Q8TAG9 804 aa26.63■■□□□ 1.85
DDX55-205ENST00000538744 PLIN1O60240 522 aa26.62■■□□□ 1.85
DDX55-205ENST00000538744 TMPOP42166 694 aaKnown RBP26.62■■□□□ 1.85
DDX55-205ENST00000538744 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.62■■□□□ 1.85
DDX55-205ENST00000538744 NWD1Q149M9 1564 aa26.62■■□□□ 1.85
DDX55-205ENST00000538744 RRS1Q15050 365 aaKnown RBP26.62■■□□□ 1.85
DDX55-205ENST00000538744 TSHZ2Q9NRE2 1034 aa26.62■■□□□ 1.85
DDX55-205ENST00000538744 USP31Q70CQ4 1352 aa26.61■■□□□ 1.85
DDX55-205ENST00000538744 ADGRL3Q9HAR2 1447 aa26.61■■□□□ 1.85
DDX55-205ENST00000538744 IL13P35225 146 aa26.61■■□□□ 1.85
DDX55-205ENST00000538744 RSPH6AQ9H0K4 717 aa26.6■■□□□ 1.85
DDX55-205ENST00000538744 PIK3C2AO00443 1686 aa26.6■■□□□ 1.85
DDX55-205ENST00000538744 NEFMP07197 916 aa26.58■■□□□ 1.85
DDX55-205ENST00000538744 MYH16Q9H6N6 1097 aa26.57■■□□□ 1.84
DDX55-205ENST00000538744 USP54Q70EL1 1684 aa26.56■■□□□ 1.84
DDX55-205ENST00000538744 PRKAR2BP31323 418 aa26.56■■□□□ 1.84
DDX55-205ENST00000538744 PEAK1Q9H792 1746 aa26.55■■□□□ 1.84
DDX55-205ENST00000538744 TRIM35Q9UPQ4 493 aa26.55■■□□□ 1.84
DDX55-205ENST00000538744 RIPK4P57078 832 aa26.53■■□□□ 1.84
DDX55-205ENST00000538744 CRBNQ96SW2 442 aa26.53■■□□□ 1.84
DDX55-205ENST00000538744 IL16Q14005 1332 aa26.52■■□□□ 1.84
DDX55-205ENST00000538744 HMOX1P09601 288 aa26.51■■□□□ 1.83
DDX55-205ENST00000538744 MARF1Q9Y4F3 1742 aaKnown RBP26.51■■□□□ 1.83
DDX55-205ENST00000538744 PHF8Q9UPP1 1060 aa26.51■■□□□ 1.83
DDX55-205ENST00000538744 C20orf194Q5TEA3 1177 aa26.5■■□□□ 1.83
DDX55-205ENST00000538744 BCAR3O75815 825 aa26.48■■□□□ 1.83
DDX55-205ENST00000538744 RBM33Q96EV2 1170 aaKnown RBP26.48■■□□□ 1.83
DDX55-205ENST00000538744 NFE2L2Q16236 605 aa26.48■■□□□ 1.83
DDX55-205ENST00000538744 RGPD1P0DJD0 1748 aa26.47■■□□□ 1.83
DDX55-205ENST00000538744 EIF4A2Q14240 407 aaKnown RBP26.47■■□□□ 1.83
DDX55-205ENST00000538744 C14orf37Q86TY3 774 aa26.46■■□□□ 1.83
DDX55-205ENST00000538744 FANCIQ9NVI1 1328 aa26.45■■□□□ 1.82
DDX55-205ENST00000538744 SBNO1A3KN83 1393 aa26.45■■□□□ 1.82
DDX55-205ENST00000538744 CT47B1P0C2W7 299 aaPredicted RBP26.45■■□□□ 1.82
DDX55-205ENST00000538744 PHACTR3Q96KR7 559 aa26.45■■□□□ 1.82
DDX55-205ENST00000538744 DLG5Q8TDM6 1919 aa26.45■■□□□ 1.82
DDX55-205ENST00000538744 RARSP54136 660 aaKnown RBP26.44■■□□□ 1.82
DDX55-205ENST00000538744 NLRP6P59044 892 aa26.44■■□□□ 1.82
DDX55-205ENST00000538744 MAP3K19Q56UN5 1328 aa26.44■■□□□ 1.82
DDX55-205ENST00000538744 FLT4P35916 1363 aa26.43■■□□□ 1.82
DDX55-205ENST00000538744 SOX12O15370 315 aa26.43■■□□□ 1.82
DDX55-205ENST00000538744 HSP90AB2PQ58FF8 381 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms