RNA–Protein interactions for RNA: ENST00000538374.5

CDH20-203, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-203ENST00000538374 POLR3AO14802 1390 aaPredicted RBP19.92■□□□□ 0.78
CDH20-203ENST00000538374 NSD2O96028 1365 aa19.92■□□□□ 0.78
CDH20-203ENST00000538374 TCP11L2Q8N4U5 519 aa19.92■□□□□ 0.78
CDH20-203ENST00000538374 MTHFSP49914 203 aa19.91■□□□□ 0.78
CDH20-203ENST00000538374 DDRGK1Q96HY6 314 aa19.91■□□□□ 0.78
CDH20-203ENST00000538374 RLBP1P12271 317 aa19.91■□□□□ 0.78
CDH20-203ENST00000538374 FAM135BQ49AJ0 1406 aa19.91■□□□□ 0.78
CDH20-203ENST00000538374 PPM1GO15355 546 aaPredicted RBP19.9■□□□□ 0.78
CDH20-203ENST00000538374 POGKQ9P215 609 aa19.9■□□□□ 0.78
CDH20-203ENST00000538374 PLEKHG1Q9ULL1 1385 aa19.9■□□□□ 0.78
CDH20-203ENST00000538374 CEBPAP49715 358 aaPredicted RBP19.89■□□□□ 0.78
CDH20-203ENST00000538374 ADGRB2O60241 1585 aa19.89■□□□□ 0.78
CDH20-203ENST00000538374 TRHP20396 242 aaPredicted RBP19.89■□□□□ 0.77
CDH20-203ENST00000538374 CGNL1Q0VF96 1302 aa19.88■□□□□ 0.77
CDH20-203ENST00000538374 RIMS1Q86UR5 1692 aaKnown RBP19.87■□□□□ 0.77
CDH20-203ENST00000538374 WAPLQ7Z5K2 1190 aa19.87■□□□□ 0.77
CDH20-203ENST00000538374 ATP7BP35670 1465 aa19.87■□□□□ 0.77
CDH20-203ENST00000538374 FRAT2O75474 233 aaPredicted RBP19.87■□□□□ 0.77
CDH20-203ENST00000538374 SRPK2P78362 688 aaKnown RBP19.87■□□□□ 0.77
CDH20-203ENST00000538374 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.87■□□□□ 0.77
CDH20-203ENST00000538374 SIRT1Q96EB6 747 aa19.86■□□□□ 0.77
CDH20-203ENST00000538374 CDK19Q9BWU1 502 aa19.86■□□□□ 0.77
CDH20-203ENST00000538374 PCDHB15Q9Y5E8 787 aa19.86■□□□□ 0.77
CDH20-203ENST00000538374 AKAP12Q02952 1782 aa19.85■□□□□ 0.77
CDH20-203ENST00000538374 ADAMTSL3P82987 1691 aa19.85■□□□□ 0.77
CDH20-203ENST00000538374 LTKP29376 864 aa19.85■□□□□ 0.77
CDH20-203ENST00000538374 MON2Q7Z3U7 1717 aa19.85■□□□□ 0.77
CDH20-203ENST00000538374 HDGFP51858 240 aaKnown RBP19.85■□□□□ 0.77
CDH20-203ENST00000538374 TOPAZ1Q8N9V7 1692 aa19.85■□□□□ 0.77
CDH20-203ENST00000538374 RARSP54136 660 aaKnown RBP19.84■□□□□ 0.77
CDH20-203ENST00000538374 ZNF142P52746 1687 aaPredicted RBP19.83■□□□□ 0.77
CDH20-203ENST00000538374 BRPF3Q9ULD4 1205 aa19.83■□□□□ 0.77
CDH20-203ENST00000538374 DIP2AQ14689 1571 aa19.83■□□□□ 0.76
CDH20-203ENST00000538374 U2AF1L5P0DN76 240 aaPredicted RBP19.83■□□□□ 0.76
CDH20-203ENST00000538374 U2AF1Q01081 240 aaKnown RBP eCLIP19.83■□□□□ 0.76
CDH20-203ENST00000538374 TSR2Q969E8 191 aaKnown RBP19.82■□□□□ 0.76
CDH20-203ENST00000538374 RUNDC1Q96C34 613 aa19.82■□□□□ 0.76
CDH20-203ENST00000538374 USP19O94966 1318 aa19.82■□□□□ 0.76
CDH20-203ENST00000538374 CEP170BQ9Y4F5 1589 aaPredicted RBP19.82■□□□□ 0.76
CDH20-203ENST00000538374 USP35Q9P2H5 1018 aa19.82■□□□□ 0.76
CDH20-203ENST00000538374 PTPRUQ92729 1446 aa19.82■□□□□ 0.76
CDH20-203ENST00000538374 CDC42BPGQ6DT37 1551 aa19.82■□□□□ 0.76
CDH20-203ENST00000538374 COL3A1P02461 1466 aaPredicted RBP19.81■□□□□ 0.76
CDH20-203ENST00000538374 ROBO2Q9HCK4 1378 aa19.81■□□□□ 0.76
CDH20-203ENST00000538374 ITSN1Q15811 1721 aa19.81■□□□□ 0.76
CDH20-203ENST00000538374 XRN1Q8IZH2 1706 aaKnown RBP19.8■□□□□ 0.76
CDH20-203ENST00000538374 IQSEC2Q5JU85 1478 aa19.8■□□□□ 0.76
CDH20-203ENST00000538374 CPSF1Q10570 1443 aaKnown RBP19.8■□□□□ 0.76
CDH20-203ENST00000538374 PDE3AQ14432 1141 aa19.79■□□□□ 0.76
CDH20-203ENST00000538374 TXNDC2Q86VQ3 553 aa19.79■□□□□ 0.76
CDH20-203ENST00000538374 SLKQ9H2G2 1235 aaPredicted RBP19.79■□□□□ 0.76
CDH20-203ENST00000538374 GGNBP2Q9H3C7 697 aa19.79■□□□□ 0.76
CDH20-203ENST00000538374 U2SURPO15042 1029 aaKnown RBP19.78■□□□□ 0.76
CDH20-203ENST00000538374 GSE1Q14687 1217 aa19.78■□□□□ 0.76
CDH20-203ENST00000538374 TERF2IPQ9NYB0 399 aa19.78■□□□□ 0.76
CDH20-203ENST00000538374 NRKQ7Z2Y5 1582 aa19.78■□□□□ 0.76
CDH20-203ENST00000538374 WASLO00401 505 aaPredicted RBP19.78■□□□□ 0.76
CDH20-203ENST00000538374 FBLN1P23142 703 aa19.78■□□□□ 0.76
CDH20-203ENST00000538374 SPRYD3Q8NCJ5 442 aa19.77■□□□□ 0.75
CDH20-203ENST00000538374 CABP1Q9NZU7 370 aa19.77■□□□□ 0.75
CDH20-203ENST00000538374 FYB1O15117 783 aa19.76■□□□□ 0.75
CDH20-203ENST00000538374 PDZRN3Q9UPQ7 1066 aa19.75■□□□□ 0.75
CDH20-203ENST00000538374 PPIP5K1Q6PFW1 1433 aa19.75■□□□□ 0.75
CDH20-203ENST00000538374 PTCH1Q13635 1447 aa19.74■□□□□ 0.75
CDH20-203ENST00000538374 HDGFL2Q7Z4V5 671 aaPredicted RBP19.72■□□□□ 0.75
CDH20-203ENST00000538374 EDC4Q6P2E9 1401 aaKnown RBP19.72■□□□□ 0.75
CDH20-203ENST00000538374 DNAJC5Q9H3Z4 198 aa19.71■□□□□ 0.75
CDH20-203ENST00000538374 ANO8Q9HCE9 1232 aaPredicted RBP19.71■□□□□ 0.75
CDH20-203ENST00000538374 PRR36Q9H6K5 1346 aa19.71■□□□□ 0.75
CDH20-203ENST00000538374 CFAP53Q96M91 514 aa19.7■□□□□ 0.74
CDH20-203ENST00000538374 MAP2P11137 1827 aaKnown RBP19.7■□□□□ 0.74
CDH20-203ENST00000538374 EXOSC9Q06265 439 aaKnown RBP19.7■□□□□ 0.74
CDH20-203ENST00000538374 PHF23Q9BUL5 403 aaPredicted RBP19.7■□□□□ 0.74
CDH20-203ENST00000538374 EID1Q9Y6B2 187 aa19.7■□□□□ 0.74
CDH20-203ENST00000538374 TBX22Q9Y458 520 aa19.69■□□□□ 0.74
CDH20-203ENST00000538374 PNPLA6Q8IY17 1366 aa19.69■□□□□ 0.74
CDH20-203ENST00000538374 THEMISQ8N1K5 641 aaPredicted RBP19.69■□□□□ 0.74
CDH20-203ENST00000538374 NUDT16Q96DE0 195 aaKnown RBP19.68■□□□□ 0.74
CDH20-203ENST00000538374 WDR63Q8IWG1 891 aa19.68■□□□□ 0.74
CDH20-203ENST00000538374 SLC26A8Q96RN1 970 aa19.67■□□□□ 0.74
CDH20-203ENST00000538374 CHD2O14647 1828 aaKnown RBP19.67■□□□□ 0.74
CDH20-203ENST00000538374 NGEFQ8N5V2 710 aa19.67■□□□□ 0.74
CDH20-203ENST00000538374 RGPD8O14715 1765 aaPredicted RBP19.67■□□□□ 0.74
CDH20-203ENST00000538374 NCKAP5LQ9HCH0 1330 aa19.66■□□□□ 0.74
CDH20-203ENST00000538374 FTSJ3Q8IY81 847 aaKnown RBP19.66■□□□□ 0.74
CDH20-203ENST00000538374 ARXQ96QS3 562 aa19.66■□□□□ 0.74
CDH20-203ENST00000538374 SMC4Q9NTJ3 1288 aa19.66■□□□□ 0.74
CDH20-203ENST00000538374 NALCNQ8IZF0 1738 aa19.66■□□□□ 0.74
CDH20-203ENST00000538374 PLPPR3Q6T4P5 718 aa19.65■□□□□ 0.74
CDH20-203ENST00000538374 MAPK8IP3Q9UPT6 1336 aa19.64■□□□□ 0.74
CDH20-203ENST00000538374 PMFBP1Q8TBY8 1022 aa19.64■□□□□ 0.73
CDH20-203ENST00000538374 SSH1Q8WYL5 1049 aa19.64■□□□□ 0.73
CDH20-203ENST00000538374 SETD1BQ9UPS6 1966 aaKnown RBP19.64■□□□□ 0.73
CDH20-203ENST00000538374 TRIM35Q9UPQ4 493 aa19.64■□□□□ 0.73
CDH20-203ENST00000538374 CCDC61Q9Y6R9 512 aa19.64■□□□□ 0.73
CDH20-203ENST00000538374 MVPQ14764 893 aaKnown RBP19.63■□□□□ 0.73
CDH20-203ENST00000538374 ITPRIPQ8IWB1 547 aa19.63■□□□□ 0.73
CDH20-203ENST00000538374 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.63■□□□□ 0.73
CDH20-203ENST00000538374 TRIM27P14373 513 aa19.62■□□□□ 0.73
CDH20-203ENST00000538374 TMPOP42166 694 aaKnown RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms