RNA–Protein interactions for RNA: ENST00000538261.7

CLDN7-203, Transcript of claudin 7, humanhuman

TSL 5 BASIC

Gene CLDN7, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-203ENST00000538261 ZNF692Q9BU19 519 aaPredicted RBP23.26■■□□□ 1.31
CLDN7-203ENST00000538261 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.25■■□□□ 1.31
CLDN7-203ENST00000538261 USP6P35125 1406 aa23.25■■□□□ 1.31
CLDN7-203ENST00000538261 RBM33Q96EV2 1170 aaKnown RBP23.25■■□□□ 1.31
CLDN7-203ENST00000538261 FANCIQ9NVI1 1328 aa23.23■■□□□ 1.31
CLDN7-203ENST00000538261 SSH2Q76I76 1423 aa23.23■■□□□ 1.31
CLDN7-203ENST00000538261 NME9Q86XW9 330 aa23.21■■□□□ 1.31
CLDN7-203ENST00000538261 MTHFSP49914 203 aa23.2■■□□□ 1.3
CLDN7-203ENST00000538261 ADAMTS8Q9UP79 889 aa23.2■■□□□ 1.3
CLDN7-203ENST00000538261 WDR43Q15061 677 aaKnown RBP eCLIP23.19■■□□□ 1.3
CLDN7-203ENST00000538261 PMFBP1Q8TBY8 1022 aa23.18■■□□□ 1.3
CLDN7-203ENST00000538261 COL3A1P02461 1466 aaPredicted RBP23.18■■□□□ 1.3
CLDN7-203ENST00000538261 TTC21BQ7Z4L5 1316 aa23.18■■□□□ 1.3
CLDN7-203ENST00000538261 PROSER2Q86WR7 435 aaPredicted RBP23.16■■□□□ 1.3
CLDN7-203ENST00000538261 OVOS2A0A0J9YW53 1432 aa23.16■■□□□ 1.3
CLDN7-203ENST00000538261 OVOS2Q6IE36 1432 aa23.16■■□□□ 1.3
CLDN7-203ENST00000538261 ZRANB1Q9UGI0 708 aa23.16■■□□□ 1.3
CLDN7-203ENST00000538261 BCL11AQ9H165 835 aa23.14■■□□□ 1.3
CLDN7-203ENST00000538261 SMG6Q86US8 1419 aaKnown RBP23.14■■□□□ 1.29
CLDN7-203ENST00000538261 MAP2P11137 1827 aaKnown RBP23.13■■□□□ 1.29
CLDN7-203ENST00000538261 PIK3C2AO00443 1686 aa23.13■■□□□ 1.29
CLDN7-203ENST00000538261 NCOA3Q9Y6Q9 1424 aa23.13■■□□□ 1.29
CLDN7-203ENST00000538261 TMEM94Q12767 1356 aa23.13■■□□□ 1.29
CLDN7-203ENST00000538261 SENP3-EIF4A1A0A087X0R7 540 aa23.13■■□□□ 1.29
CLDN7-203ENST00000538261 C14orf37Q86TY3 774 aa23.13■■□□□ 1.29
CLDN7-203ENST00000538261 NGDNQ8NEJ9 315 aaKnown RBP23.13■■□□□ 1.29
CLDN7-203ENST00000538261 AATKQ6ZMQ8 1374 aa23.12■■□□□ 1.29
CLDN7-203ENST00000538261 PNPLA6Q8IY17 1366 aa23.12■■□□□ 1.29
CLDN7-203ENST00000538261 CFAP53Q96M91 514 aa23.12■■□□□ 1.29
CLDN7-203ENST00000538261 TTC21AQ8NDW8 1320 aa23.12■■□□□ 1.29
CLDN7-203ENST00000538261 COG3Q96JB2 828 aa23.12■■□□□ 1.29
CLDN7-203ENST00000538261 XIRP1Q702N8 1843 aaKnown RBP23.11■■□□□ 1.29
CLDN7-203ENST00000538261 USP54Q70EL1 1684 aa23.11■■□□□ 1.29
CLDN7-203ENST00000538261 PPP4R2Q9NY27 417 aa23.1■■□□□ 1.29
CLDN7-203ENST00000538261 PHF8Q9UPP1 1060 aa23.1■■□□□ 1.29
CLDN7-203ENST00000538261 DCCP43146 1447 aa23.09■■□□□ 1.29
CLDN7-203ENST00000538261 C19orf44Q9H6X5 657 aa23.09■■□□□ 1.29
CLDN7-203ENST00000538261 POLKQ9UBT6 870 aa23.09■■□□□ 1.29
CLDN7-203ENST00000538261 MARF1Q9Y4F3 1742 aaKnown RBP23.09■■□□□ 1.29
CLDN7-203ENST00000538261 FBLN1P23142 703 aa23.08■■□□□ 1.29
CLDN7-203ENST00000538261 MSH5O43196 834 aa23.08■■□□□ 1.28
CLDN7-203ENST00000538261 CDK12Q9NYV4 1490 aaPredicted RBP23.07■■□□□ 1.28
CLDN7-203ENST00000538261 USP31Q70CQ4 1352 aa23.07■■□□□ 1.28
CLDN7-203ENST00000538261 C1orf167Q5SNV9 1468 aa23.06■■□□□ 1.28
CLDN7-203ENST00000538261 KIF1AQ12756 1690 aa23.06■■□□□ 1.28
CLDN7-203ENST00000538261 LRRC7Q96NW7 1537 aa23.05■■□□□ 1.28
CLDN7-203ENST00000538261 ESCO1Q5FWF5 840 aa23.04■■□□□ 1.28
CLDN7-203ENST00000538261 MST1RQ04912 1400 aa23.04■■□□□ 1.28
CLDN7-203ENST00000538261 CCDC146Q8IYE0 955 aa23.04■■□□□ 1.28
CLDN7-203ENST00000538261 EMILIN1Q9Y6C2 1016 aa23.03■■□□□ 1.28
CLDN7-203ENST00000538261 IQSEC2Q5JU85 1478 aa23.02■■□□□ 1.28
CLDN7-203ENST00000538261 ORAI2Q96SN7 254 aa23.02■■□□□ 1.28
CLDN7-203ENST00000538261 ZNF335Q9H4Z2 1342 aaPredicted RBP23.01■■□□□ 1.27
CLDN7-203ENST00000538261 SALL2Q9Y467 1007 aaPredicted RBP23.01■■□□□ 1.27
CLDN7-203ENST00000538261 PEAK1Q9H792 1746 aa23■■□□□ 1.27
CLDN7-203ENST00000538261 RRS1Q15050 365 aaKnown RBP22.99■■□□□ 1.27
CLDN7-203ENST00000538261 TRPM3Q9HCF6 1732 aaPredicted RBP22.99■■□□□ 1.27
CLDN7-203ENST00000538261 DIAPH1O60610 1272 aaKnown RBP22.98■■□□□ 1.27
CLDN7-203ENST00000538261 ZNF521Q96K83 1311 aa22.98■■□□□ 1.27
CLDN7-203ENST00000538261 NUDCQ9Y266 331 aa22.98■■□□□ 1.27
CLDN7-203ENST00000538261 MSH6P52701 1360 aa22.98■■□□□ 1.27
CLDN7-203ENST00000538261 APAF1O14727 1248 aa22.97■■□□□ 1.27
CLDN7-203ENST00000538261 PPM1GO15355 546 aaPredicted RBP22.97■■□□□ 1.27
CLDN7-203ENST00000538261 U2AF1L5P0DN76 240 aaPredicted RBP22.97■■□□□ 1.27
CLDN7-203ENST00000538261 ATF3P18847 181 aa22.97■■□□□ 1.27
CLDN7-203ENST00000538261 U2AF1Q01081 240 aaKnown RBP eCLIP22.97■■□□□ 1.27
CLDN7-203ENST00000538261 PDE3BQ13370 1112 aa22.96■■□□□ 1.27
CLDN7-203ENST00000538261 ERICH6Q7L0X2 663 aa22.96■■□□□ 1.27
CLDN7-203ENST00000538261 RUNDC1Q96C34 613 aa22.96■■□□□ 1.27
CLDN7-203ENST00000538261 IRX6P78412 446 aaPredicted RBP22.94■■□□□ 1.26
CLDN7-203ENST00000538261 CADPS2Q86UW7 1296 aa22.94■■□□□ 1.26
CLDN7-203ENST00000538261 NLRP6P59044 892 aa22.94■■□□□ 1.26
CLDN7-203ENST00000538261 PSME1Q06323 249 aa22.94■■□□□ 1.26
CLDN7-203ENST00000538261 U2SURPO15042 1029 aaKnown RBP22.93■■□□□ 1.26
CLDN7-203ENST00000538261 FOXO3O43524 673 aa22.93■■□□□ 1.26
CLDN7-203ENST00000538261 ABTB2Q8N961 1025 aa22.93■■□□□ 1.26
CLDN7-203ENST00000538261 PAK3O75914 559 aaPredicted RBP22.92■■□□□ 1.26
CLDN7-203ENST00000538261 IL13P35225 146 aa22.92■■□□□ 1.26
CLDN7-203ENST00000538261 NGEFQ8N5V2 710 aa22.92■■□□□ 1.26
CLDN7-203ENST00000538261 DMRT2Q9Y5R5 561 aa22.92■■□□□ 1.26
CLDN7-203ENST00000538261 CDCA7LQ96GN5 454 aa22.91■■□□□ 1.26
CLDN7-203ENST00000538261 PLEKHF1Q96S99 279 aa22.91■■□□□ 1.26
CLDN7-203ENST00000538261 MAP3K19Q56UN5 1328 aa22.91■■□□□ 1.26
CLDN7-203ENST00000538261 NFAT5O94916 1531 aa22.9■■□□□ 1.26
CLDN7-203ENST00000538261 NUTM2GQ5VZR2 741 aa22.9■■□□□ 1.26
CLDN7-203ENST00000538261 ALS2Q96Q42 1657 aa22.89■■□□□ 1.26
CLDN7-203ENST00000538261 RGPD1P0DJD0 1748 aa22.89■■□□□ 1.25
CLDN7-203ENST00000538261 SBNO1A3KN83 1393 aa22.88■■□□□ 1.25
CLDN7-203ENST00000538261 SOX12O15370 315 aa22.88■■□□□ 1.25
CLDN7-203ENST00000538261 TCP11L2Q8N4U5 519 aa22.88■■□□□ 1.25
CLDN7-203ENST00000538261 XPCQ01831 940 aaPredicted RBP22.88■■□□□ 1.25
CLDN7-203ENST00000538261 FLT4P35916 1363 aa22.87■■□□□ 1.25
CLDN7-203ENST00000538261 SLIT3O75094 1523 aa22.86■■□□□ 1.25
CLDN7-203ENST00000538261 PHF23Q9BUL5 403 aaPredicted RBP22.86■■□□□ 1.25
CLDN7-203ENST00000538261 LTN1O94822 1766 aa22.86■■□□□ 1.25
CLDN7-203ENST00000538261 RSPH6AQ9H0K4 717 aa22.86■■□□□ 1.25
CLDN7-203ENST00000538261 KIF24Q5T7B8 1368 aa22.85■■□□□ 1.25
CLDN7-203ENST00000538261 NCBP3Q53F19 620 aaKnown RBP22.85■■□□□ 1.25
CLDN7-203ENST00000538261 KRT28Q7Z3Y7 464 aa22.85■■□□□ 1.25
CLDN7-203ENST00000538261 FCHSD2O94868 740 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms