RNA–Protein interactions for RNA: ENST00000537103.2

IFT88-207, Transcript of intraflagellar transport 88, humanhuman

TSL 5

Gene IFT88, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-207ENST00000537103 PXDNQ92626 1479 aa9.2□□□□□ -0.94
IFT88-207ENST00000537103 MYOM1P52179 1685 aa9.2□□□□□ -0.94
IFT88-207ENST00000537103 CPSF1Q10570 1443 aaKnown RBP9.2□□□□□ -0.94
IFT88-207ENST00000537103 PELP1Q8IZL8 1130 aaKnown RBP9.19□□□□□ -0.94
IFT88-207ENST00000537103 SLAIN2Q9P270 581 aa9.19□□□□□ -0.94
IFT88-207ENST00000537103 ALS2Q96Q42 1657 aa9.19□□□□□ -0.94
IFT88-207ENST00000537103 ZNF692Q9BU19 519 aaPredicted RBP9.19□□□□□ -0.94
IFT88-207ENST00000537103 STK26Q9P289 416 aa9.19□□□□□ -0.94
IFT88-207ENST00000537103 PHLPP1O60346 1717 aa9.19□□□□□ -0.94
IFT88-207ENST00000537103 NPHP3Q7Z494 1330 aa9.19□□□□□ -0.94
IFT88-207ENST00000537103 WAPLQ7Z5K2 1190 aa9.18□□□□□ -0.94
IFT88-207ENST00000537103 CCDC61Q9Y6R9 512 aa9.18□□□□□ -0.94
IFT88-207ENST00000537103 SSH2Q76I76 1423 aa9.18□□□□□ -0.94
IFT88-207ENST00000537103 SOS2Q07890 1332 aaPredicted RBP9.18□□□□□ -0.94
IFT88-207ENST00000537103 CDK19Q9BWU1 502 aa9.18□□□□□ -0.94
IFT88-207ENST00000537103 PSME1Q06323 249 aa9.17□□□□□ -0.94
IFT88-207ENST00000537103 U3KPZ7 1027 aaPredicted RBP9.17□□□□□ -0.94
IFT88-207ENST00000537103 ARHGEF10O15013 1369 aa9.17□□□□□ -0.94
IFT88-207ENST00000537103 ANKRD36BQ8N2N9 1353 aa9.17□□□□□ -0.94
IFT88-207ENST00000537103 TTC21AQ8NDW8 1320 aa9.17□□□□□ -0.94
IFT88-207ENST00000537103 PPIP5K1Q6PFW1 1433 aa9.17□□□□□ -0.94
IFT88-207ENST00000537103 BRPF1P55201 1214 aaPredicted RBP9.17□□□□□ -0.94
IFT88-207ENST00000537103 NSD2O96028 1365 aa9.16□□□□□ -0.94
IFT88-207ENST00000537103 CRYBG1Q9Y4K1 1723 aa9.16□□□□□ -0.94
IFT88-207ENST00000537103 EDC4Q6P2E9 1401 aaKnown RBP9.16□□□□□ -0.94
IFT88-207ENST00000537103 ST20-MTHFSA0A0A6YYL1 179 aa9.16□□□□□ -0.94
IFT88-207ENST00000537103 NUDT16Q96DE0 195 aaKnown RBP9.16□□□□□ -0.94
IFT88-207ENST00000537103 USP31Q70CQ4 1352 aa9.16□□□□□ -0.94
IFT88-207ENST00000537103 NPC1L1Q9UHC9 1359 aa9.16□□□□□ -0.94
IFT88-207ENST00000537103 UBAP1LF5GYI3 381 aa9.16□□□□□ -0.94
IFT88-207ENST00000537103 HSPA5P11021 654 aaKnown RBP9.16□□□□□ -0.94
IFT88-207ENST00000537103 BRINP3Q76B58 766 aa9.16□□□□□ -0.94
IFT88-207ENST00000537103 PHF8Q9UPP1 1060 aa9.16□□□□□ -0.94
IFT88-207ENST00000537103 ANKRD26Q9UPS8 1709 aa9.15□□□□□ -0.94
IFT88-207ENST00000537103 PHRF1Q9P1Y6 1649 aaKnown RBP9.15□□□□□ -0.94
IFT88-207ENST00000537103 TNS3Q68CZ2 1445 aa9.15□□□□□ -0.94
IFT88-207ENST00000537103 CD163L1Q9NR16 1453 aa9.15□□□□□ -0.94
IFT88-207ENST00000537103 PROM2Q8N271 834 aa9.15□□□□□ -0.94
IFT88-207ENST00000537103 SLIT3O75094 1523 aa9.15□□□□□ -0.94
IFT88-207ENST00000537103 USP6P35125 1406 aa9.15□□□□□ -0.94
IFT88-207ENST00000537103 PRR36Q9H6K5 1346 aa9.15□□□□□ -0.94
IFT88-207ENST00000537103 MINK1Q8N4C8 1332 aaPredicted RBP9.14□□□□□ -0.95
IFT88-207ENST00000537103 RGPD8O14715 1765 aaPredicted RBP9.14□□□□□ -0.95
IFT88-207ENST00000537103 SPATA31A6Q5VVP1 1343 aa9.14□□□□□ -0.95
IFT88-207ENST00000537103 WASHC2AQ641Q2 1341 aa9.14□□□□□ -0.95
IFT88-207ENST00000537103 JCADQ9P266 1359 aa9.14□□□□□ -0.95
IFT88-207ENST00000537103 DISP3Q9P2K9 1392 aa9.14□□□□□ -0.95
IFT88-207ENST00000537103 TERF2IPQ9NYB0 399 aa9.14□□□□□ -0.95
IFT88-207ENST00000537103 ABCA3Q99758 1704 aa9.13□□□□□ -0.95
IFT88-207ENST00000537103 KIF20BQ96Q89 1820 aa9.13□□□□□ -0.95
IFT88-207ENST00000537103 CCDC7Q96M83 1385 aa9.12□□□□□ -0.95
IFT88-207ENST00000537103 HDGFL2Q7Z4V5 671 aaPredicted RBP9.12□□□□□ -0.95
IFT88-207ENST00000537103 LRRC59Q96AG4 307 aaKnown RBP9.12□□□□□ -0.95
IFT88-207ENST00000537103 MARF1Q9Y4F3 1742 aaKnown RBP9.12□□□□□ -0.95
IFT88-207ENST00000537103 KIF24Q5T7B8 1368 aa9.12□□□□□ -0.95
IFT88-207ENST00000537103 SRPK2P78362 688 aaKnown RBP9.12□□□□□ -0.95
IFT88-207ENST00000537103 SAMD1Q6SPF0 538 aaPredicted RBP9.12□□□□□ -0.95
IFT88-207ENST00000537103 SPATA31A3Q5VYP0 1347 aa9.11□□□□□ -0.95
IFT88-207ENST00000537103 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.11□□□□□ -0.95
IFT88-207ENST00000537103 USP19O94966 1318 aa9.11□□□□□ -0.95
IFT88-207ENST00000537103 KTN1Q86UP2 1357 aaKnown RBP9.1□□□□□ -0.95
IFT88-207ENST00000537103 PLEKHG2Q9H7P9 1386 aa9.1□□□□□ -0.95
IFT88-207ENST00000537103 PIK3C2AO00443 1686 aa9.1□□□□□ -0.95
IFT88-207ENST00000537103 PNPLA6Q8IY17 1366 aa9.1□□□□□ -0.95
IFT88-207ENST00000537103 ARID3AQ99856 593 aa9.1□□□□□ -0.95
IFT88-207ENST00000537103 NWD2Q9ULI1 1742 aa9.09□□□□□ -0.95
IFT88-207ENST00000537103 ACEP12821 1306 aa9.09□□□□□ -0.95
IFT88-207ENST00000537103 ESCO1Q5FWF5 840 aa9.09□□□□□ -0.95
IFT88-207ENST00000537103 OVOS2A0A0J9YW53 1432 aa9.09□□□□□ -0.95
IFT88-207ENST00000537103 OVOS2Q6IE36 1432 aa9.09□□□□□ -0.95
IFT88-207ENST00000537103 CPDO75976 1380 aa9.09□□□□□ -0.95
IFT88-207ENST00000537103 CGNL1Q0VF96 1302 aa9.09□□□□□ -0.95
IFT88-207ENST00000537103 COL14A1Q05707 1796 aaKnown RBP9.08□□□□□ -0.96
IFT88-207ENST00000537103 A0A1W2PP64 1363 aa9.08□□□□□ -0.96
IFT88-207ENST00000537103 CABP2Q9NPB3 220 aa9.08□□□□□ -0.96
IFT88-207ENST00000537103 KIF7Q2M1P5 1343 aa9.08□□□□□ -0.96
IFT88-207ENST00000537103 KRT28Q7Z3Y7 464 aa9.08□□□□□ -0.96
IFT88-207ENST00000537103 AATKQ6ZMQ8 1374 aa9.07□□□□□ -0.96
IFT88-207ENST00000537103 FAM208AQ9UK61 1670 aaKnown RBP9.07□□□□□ -0.96
IFT88-207ENST00000537103 SMG6Q86US8 1419 aaKnown RBP9.07□□□□□ -0.96
IFT88-207ENST00000537103 RTL1A6NKG5 1358 aa9.07□□□□□ -0.96
IFT88-207ENST00000537103 NGDNQ8NEJ9 315 aaKnown RBP9.07□□□□□ -0.96
IFT88-207ENST00000537103 ORAI2Q96SN7 254 aa9.07□□□□□ -0.96
IFT88-207ENST00000537103 TTC21BQ7Z4L5 1316 aa9.06□□□□□ -0.96
IFT88-207ENST00000537103 NFAT5O94916 1531 aa9.06□□□□□ -0.96
IFT88-207ENST00000537103 CABP1Q9NZU7 370 aa9.06□□□□□ -0.96
IFT88-207ENST00000537103 KCNH5Q8NCM2 988 aa9.06□□□□□ -0.96
IFT88-207ENST00000537103 HIRIP3Q9BW71 556 aaPredicted RBP9.06□□□□□ -0.96
IFT88-207ENST00000537103 SAFB2Q14151 953 aaKnown RBP eCLIP9.05□□□□□ -0.96
IFT88-207ENST00000537103 SPOCK2Q92563 424 aa9.05□□□□□ -0.96
IFT88-207ENST00000537103 ZNF219Q9P2Y4 722 aaPredicted RBP9.05□□□□□ -0.96
IFT88-207ENST00000537103 LMO7Q8WWI1 1683 aa9.05□□□□□ -0.96
IFT88-207ENST00000537103 NLRP13Q86W25 1043 aa9.04□□□□□ -0.96
IFT88-207ENST00000537103 BLMP54132 1417 aaPredicted RBP9.03□□□□□ -0.96
IFT88-207ENST00000537103 NSD3Q9BZ95 1437 aa9.03□□□□□ -0.96
IFT88-207ENST00000537103 NRAPQ86VF7 1730 aa9.03□□□□□ -0.96
IFT88-207ENST00000537103 CAMTA1Q9Y6Y1 1673 aa9.03□□□□□ -0.96
IFT88-207ENST00000537103 INSRP06213 1382 aa9.03□□□□□ -0.96
IFT88-207ENST00000537103 RBM33Q96EV2 1170 aaKnown RBP9.03□□□□□ -0.96
IFT88-207ENST00000537103 HSPA1LP34931 641 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms