RNA–Protein interactions for RNA: ENST00000536797.5

LPCAT3-204, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-204ENST00000536797 ZNF692Q9BU19 519 aaPredicted RBP29.36■■■□□ 2.29
LPCAT3-204ENST00000536797 ADAMTS2O95450 1211 aa29.35■■■□□ 2.29
LPCAT3-204ENST00000536797 HAP1P54257 671 aaPredicted RBP29.34■■■□□ 2.29
LPCAT3-204ENST00000536797 ABCA3Q99758 1704 aa29.34■■■□□ 2.29
LPCAT3-204ENST00000536797 CPSF1Q10570 1443 aaKnown RBP29.33■■■□□ 2.29
LPCAT3-204ENST00000536797 PLEKHG5O94827 1062 aa29.33■■■□□ 2.29
LPCAT3-204ENST00000536797 NINLQ9Y2I6 1382 aa29.33■■■□□ 2.29
LPCAT3-204ENST00000536797 MARF1Q9Y4F3 1742 aaKnown RBP29.32■■■□□ 2.28
LPCAT3-204ENST00000536797 CABLES1Q8TDN4 633 aa29.31■■■□□ 2.28
LPCAT3-204ENST00000536797 C8orf37Q96NL8 207 aa29.31■■■□□ 2.28
LPCAT3-204ENST00000536797 SLC12A5Q9H2X9 1139 aa29.31■■■□□ 2.28
LPCAT3-204ENST00000536797 KTN1Q86UP2 1357 aaKnown RBP29.3■■■□□ 2.28
LPCAT3-204ENST00000536797 MON2Q7Z3U7 1717 aa29.3■■■□□ 2.28
LPCAT3-204ENST00000536797 HDGFL2Q7Z4V5 671 aaPredicted RBP29.29■■■□□ 2.28
LPCAT3-204ENST00000536797 ABTB2Q8N961 1025 aa29.29■■■□□ 2.28
LPCAT3-204ENST00000536797 CD163L1Q9NR16 1453 aa29.29■■■□□ 2.28
LPCAT3-204ENST00000536797 TERF2IPQ9NYB0 399 aa29.28■■■□□ 2.28
LPCAT3-204ENST00000536797 RGS17Q9UGC6 210 aaPredicted RBP29.28■■■□□ 2.28
LPCAT3-204ENST00000536797 NRKQ7Z2Y5 1582 aa29.28■■■□□ 2.28
LPCAT3-204ENST00000536797 SSH2Q76I76 1423 aa29.28■■■□□ 2.28
LPCAT3-204ENST00000536797 CRYBG1Q9Y4K1 1723 aa29.27■■■□□ 2.28
LPCAT3-204ENST00000536797 NUTM2GQ5VZR2 741 aa29.26■■■□□ 2.27
LPCAT3-204ENST00000536797 NGLY1Q96IV0 654 aa29.26■■■□□ 2.27
LPCAT3-204ENST00000536797 AFF2P51816 1311 aa29.25■■■□□ 2.27
LPCAT3-204ENST00000536797 A0A1W2PP64 1363 aa29.25■■■□□ 2.27
LPCAT3-204ENST00000536797 ZNF772Q68DY9 489 aaPredicted RBP29.24■■■□□ 2.27
LPCAT3-204ENST00000536797 TTC21BQ7Z4L5 1316 aa29.24■■■□□ 2.27
LPCAT3-204ENST00000536797 PHRF1Q9P1Y6 1649 aaKnown RBP29.23■■■□□ 2.27
LPCAT3-204ENST00000536797 TTC21AQ8NDW8 1320 aa29.23■■■□□ 2.27
LPCAT3-204ENST00000536797 PIK3C2AO00443 1686 aa29.22■■■□□ 2.27
LPCAT3-204ENST00000536797 NLRP13Q86W25 1043 aa29.22■■■□□ 2.27
LPCAT3-204ENST00000536797 MYOM1P52179 1685 aa29.2■■■□□ 2.26
LPCAT3-204ENST00000536797 EDC4Q6P2E9 1401 aaKnown RBP29.2■■■□□ 2.26
LPCAT3-204ENST00000536797 ANKRD36BQ8N2N9 1353 aa29.2■■■□□ 2.26
LPCAT3-204ENST00000536797 NLRP6P59044 892 aa29.19■■■□□ 2.26
LPCAT3-204ENST00000536797 USP19O94966 1318 aa29.18■■■□□ 2.26
LPCAT3-204ENST00000536797 FNBP4Q8N3X1 1017 aaPredicted RBP29.18■■■□□ 2.26
LPCAT3-204ENST00000536797 POTEAQ6S8J7 498 aa29.17■■■□□ 2.26
LPCAT3-204ENST00000536797 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.17■■■□□ 2.26
LPCAT3-204ENST00000536797 POLR3GLQ9BT43 218 aa29.17■■■□□ 2.26
LPCAT3-204ENST00000536797 USP21Q9UK80 565 aa29.15■■■□□ 2.26
LPCAT3-204ENST00000536797 PLCH1Q4KWH8 1693 aa29.14■■■□□ 2.25
LPCAT3-204ENST00000536797 SLIT2O94813 1529 aa29.13■■■□□ 2.25
LPCAT3-204ENST00000536797 SLIT3O75094 1523 aa29.12■■■□□ 2.25
LPCAT3-204ENST00000536797 COL14A1Q05707 1796 aaKnown RBP29.12■■■□□ 2.25
LPCAT3-204ENST00000536797 ILDR2Q71H61 639 aa29.11■■■□□ 2.25
LPCAT3-204ENST00000536797 FAM83GA6ND36 823 aa29.11■■■□□ 2.25
LPCAT3-204ENST00000536797 GCP02774 474 aa29.11■■■□□ 2.25
LPCAT3-204ENST00000536797 NWD2Q9ULI1 1742 aa29.11■■■□□ 2.25
LPCAT3-204ENST00000536797 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.1■■■□□ 2.25
LPCAT3-204ENST00000536797 ZC3H6P61129 1189 aaKnown RBP29.1■■■□□ 2.25
LPCAT3-204ENST00000536797 PRDM11Q9NQV5 511 aa29.1■■■□□ 2.25
LPCAT3-204ENST00000536797 KIAA0232Q92628 1395 aa29.1■■■□□ 2.25
LPCAT3-204ENST00000536797 BCL9LQ86UU0 1499 aa29.1■■■□□ 2.25
LPCAT3-204ENST00000536797 USP54Q70EL1 1684 aa29.09■■■□□ 2.25
LPCAT3-204ENST00000536797 NME9Q86XW9 330 aa29.09■■■□□ 2.25
LPCAT3-204ENST00000536797 QTRT2Q9H974 415 aaKnown RBP29.09■■■□□ 2.25
LPCAT3-204ENST00000536797 USP31Q70CQ4 1352 aa29.08■■■□□ 2.25
LPCAT3-204ENST00000536797 C11orf95C9JLR9 678 aaPredicted RBP29.08■■■□□ 2.25
LPCAT3-204ENST00000536797 TRPC5Q9UL62 973 aaPredicted RBP29.07■■■□□ 2.24
LPCAT3-204ENST00000536797 UNC5CLQ8IV45 518 aa29.06■■■□□ 2.24
LPCAT3-204ENST00000536797 CPDO75976 1380 aa29.05■■■□□ 2.24
LPCAT3-204ENST00000536797 KCNH5Q8NCM2 988 aa29.05■■■□□ 2.24
LPCAT3-204ENST00000536797 ZRANB1Q9UGI0 708 aa29.05■■■□□ 2.24
LPCAT3-204ENST00000536797 ATRNO75882 1429 aa29.04■■■□□ 2.24
LPCAT3-204ENST00000536797 RXRBP28702 533 aa29.03■■■□□ 2.24
LPCAT3-204ENST00000536797 BTG4Q9NY30 223 aa29.03■■■□□ 2.24
LPCAT3-204ENST00000536797 CHRNA2Q15822 529 aa29.03■■■□□ 2.24
LPCAT3-204ENST00000536797 KIF7Q2M1P5 1343 aa29.02■■■□□ 2.24
LPCAT3-204ENST00000536797 NRAPQ86VF7 1730 aa29.01■■■□□ 2.23
LPCAT3-204ENST00000536797 OVOS2A0A0J9YW53 1432 aa29.01■■■□□ 2.23
LPCAT3-204ENST00000536797 OVOS2Q6IE36 1432 aa29.01■■■□□ 2.23
LPCAT3-204ENST00000536797 SOX12O15370 315 aa29.01■■■□□ 2.23
LPCAT3-204ENST00000536797 NSD3Q9BZ95 1437 aa29■■■□□ 2.23
LPCAT3-204ENST00000536797 RBM6P78332 1123 aaKnown RBP29■■■□□ 2.23
LPCAT3-204ENST00000536797 KIF20BQ96Q89 1820 aa29■■■□□ 2.23
LPCAT3-204ENST00000536797 CARD14Q9BXL6 1004 aa28.99■■■□□ 2.23
LPCAT3-204ENST00000536797 ZBTB7CA1YPR0 619 aa28.98■■■□□ 2.23
LPCAT3-204ENST00000536797 ZEB1P37275 1124 aaPredicted RBP28.98■■■□□ 2.23
LPCAT3-204ENST00000536797 COG3Q96JB2 828 aa28.98■■■□□ 2.23
LPCAT3-204ENST00000536797 NFAT5O94916 1531 aa28.98■■■□□ 2.23
LPCAT3-204ENST00000536797 LMO7Q8WWI1 1683 aa28.97■■■□□ 2.23
LPCAT3-204ENST00000536797 FYB1O15117 783 aa28.95■■■□□ 2.23
LPCAT3-204ENST00000536797 VPS72Q15906 364 aa28.95■■■□□ 2.23
LPCAT3-204ENST00000536797 GJD4Q96KN9 370 aaPredicted RBP28.94■■■□□ 2.22
LPCAT3-204ENST00000536797 PANK3Q9H999 370 aa28.94■■■□□ 2.22
LPCAT3-204ENST00000536797 ARHGEF25Q86VW2 580 aa28.94■■■□□ 2.22
LPCAT3-204ENST00000536797 CDK12Q9NYV4 1490 aaPredicted RBP28.93■■■□□ 2.22
LPCAT3-204ENST00000536797 AATKQ6ZMQ8 1374 aa28.93■■■□□ 2.22
LPCAT3-204ENST00000536797 GGNBP2Q9H3C7 697 aa28.93■■■□□ 2.22
LPCAT3-204ENST00000536797 CCDC9Q9Y3X0 531 aaKnown RBP28.93■■■□□ 2.22
LPCAT3-204ENST00000536797 CAMTA1Q9Y6Y1 1673 aa28.93■■■□□ 2.22
LPCAT3-204ENST00000536797 CCDC7Q96M83 1385 aa28.92■■■□□ 2.22
LPCAT3-204ENST00000536797 CGNL1Q0VF96 1302 aa28.91■■■□□ 2.22
LPCAT3-204ENST00000536797 STRN4Q9NRL3 753 aa28.91■■■□□ 2.22
LPCAT3-204ENST00000536797 LTN1O94822 1766 aa28.91■■■□□ 2.22
LPCAT3-204ENST00000536797 COL18A1P39060 1754 aa28.91■■■□□ 2.22
LPCAT3-204ENST00000536797 GLI3P10071 1580 aa28.9■■■□□ 2.22
LPCAT3-204ENST00000536797 EVA1CP58658 441 aa28.9■■■□□ 2.22
LPCAT3-204ENST00000536797 WASHC2AQ641Q2 1341 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms