RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 TRPM3Q9HCF6 1732 aaPredicted RBP18.05■□□□□ 0.48
PRKDC-207ENST00000536483 TULP4Q9NRJ4 1543 aa18.04■□□□□ 0.48
PRKDC-207ENST00000536483 PAK3O75914 559 aaPredicted RBP18.04■□□□□ 0.48
PRKDC-207ENST00000536483 FAM98CQ17RN3 349 aaKnown RBP18.04■□□□□ 0.48
PRKDC-207ENST00000536483 ALS2Q96Q42 1657 aa18.02■□□□□ 0.47
PRKDC-207ENST00000536483 NRAPQ86VF7 1730 aa18.01■□□□□ 0.47
PRKDC-207ENST00000536483 NUDT16Q96DE0 195 aaKnown RBP18■□□□□ 0.47
PRKDC-207ENST00000536483 COL14A1Q05707 1796 aaKnown RBP17.99■□□□□ 0.47
PRKDC-207ENST00000536483 PRDM11Q9NQV5 511 aa17.98■□□□□ 0.47
PRKDC-207ENST00000536483 SPATA31A5Q5VU36 1347 aa17.98■□□□□ 0.47
PRKDC-207ENST00000536483 SPATA31A7Q8IWB4 1347 aa17.98■□□□□ 0.47
PRKDC-207ENST00000536483 ATP7BP35670 1465 aa17.97■□□□□ 0.47
PRKDC-207ENST00000536483 FAM182BQ5T319 152 aa17.97■□□□□ 0.47
PRKDC-207ENST00000536483 L3MBTL2Q969R5 705 aa17.97■□□□□ 0.47
PRKDC-207ENST00000536483 CDK19Q9BWU1 502 aa17.97■□□□□ 0.47
PRKDC-207ENST00000536483 KIAA1210Q9ULL0 1709 aa17.97■□□□□ 0.47
PRKDC-207ENST00000536483 BAG6P46379 1132 aa17.96■□□□□ 0.47
PRKDC-207ENST00000536483 ARHGEF28Q8N1W1 1705 aaKnown RBP17.95■□□□□ 0.46
PRKDC-207ENST00000536483 NUTM2GQ5VZR2 741 aa17.95■□□□□ 0.46
PRKDC-207ENST00000536483 SIN3AQ96ST3 1273 aa17.95■□□□□ 0.46
PRKDC-207ENST00000536483 KIAA0232Q92628 1395 aa17.94■□□□□ 0.46
PRKDC-207ENST00000536483 CHRNA2Q15822 529 aa17.94■□□□□ 0.46
PRKDC-207ENST00000536483 CRYBG1Q9Y4K1 1723 aa17.94■□□□□ 0.46
PRKDC-207ENST00000536483 ZC3H6P61129 1189 aaKnown RBP17.93■□□□□ 0.46
PRKDC-207ENST00000536483 ACEP12821 1306 aa17.93■□□□□ 0.46
PRKDC-207ENST00000536483 PSDA5PKW4 1024 aaPredicted RBP17.92■□□□□ 0.46
PRKDC-207ENST00000536483 EN1Q05925 392 aaPredicted RBP17.92■□□□□ 0.46
PRKDC-207ENST00000536483 NBPF8Q3BBV2 869 aa17.92■□□□□ 0.46
PRKDC-207ENST00000536483 STRN4Q9NRL3 753 aa17.92■□□□□ 0.46
PRKDC-207ENST00000536483 CCDC61Q9Y6R9 512 aa17.92■□□□□ 0.46
PRKDC-207ENST00000536483 SPATA31A1Q5TZJ5 1347 aa17.92■□□□□ 0.46
PRKDC-207ENST00000536483 ITSN1Q15811 1721 aa17.92■□□□□ 0.46
PRKDC-207ENST00000536483 NBPF1Q3BBV0 1214 aa17.91■□□□□ 0.46
PRKDC-207ENST00000536483 POLR3AO14802 1390 aaPredicted RBP17.9■□□□□ 0.46
PRKDC-207ENST00000536483 PLEKHG3A1L390 1219 aa17.89■□□□□ 0.45
PRKDC-207ENST00000536483 THSD7AQ9UPZ6 1657 aa17.89■□□□□ 0.45
PRKDC-207ENST00000536483 ABTB2Q8N961 1025 aa17.88■□□□□ 0.45
PRKDC-207ENST00000536483 USP35Q9P2H5 1018 aa17.88■□□□□ 0.45
PRKDC-207ENST00000536483 PHRF1Q9P1Y6 1649 aaKnown RBP17.87■□□□□ 0.45
PRKDC-207ENST00000536483 EVA1CP58658 441 aa17.87■□□□□ 0.45
PRKDC-207ENST00000536483 NEUROD1Q13562 356 aa17.86■□□□□ 0.45
PRKDC-207ENST00000536483 TOPAZ1Q8N9V7 1692 aa17.86■□□□□ 0.45
PRKDC-207ENST00000536483 RGPD1P0DJD0 1748 aa17.86■□□□□ 0.45
PRKDC-207ENST00000536483 TRIM37O94972 964 aa17.85■□□□□ 0.45
PRKDC-207ENST00000536483 SRPK2P78362 688 aaKnown RBP17.85■□□□□ 0.45
PRKDC-207ENST00000536483 EZH2Q15910 746 aaKnown RBP17.85■□□□□ 0.45
PRKDC-207ENST00000536483 R3HDM1Q15032 1099 aaKnown RBP17.84■□□□□ 0.45
PRKDC-207ENST00000536483 FAM196AQ6ZSG2 479 aa17.84■□□□□ 0.45
PRKDC-207ENST00000536483 CABP2Q9NPB3 220 aa17.84■□□□□ 0.45
PRKDC-207ENST00000536483 LRP5O75197 1615 aa17.83■□□□□ 0.45
PRKDC-207ENST00000536483 DISP2A7MBM2 1401 aa17.83■□□□□ 0.45
PRKDC-207ENST00000536483 SSH2Q76I76 1423 aa17.83■□□□□ 0.45
PRKDC-207ENST00000536483 CENPJQ9HC77 1338 aaPredicted RBP17.83■□□□□ 0.44
PRKDC-207ENST00000536483 LARP1Q6PKG0 1096 aaKnown RBP17.83■□□□□ 0.44
PRKDC-207ENST00000536483 PPIP5K1Q6PFW1 1433 aa17.82■□□□□ 0.44
PRKDC-207ENST00000536483 USP19O94966 1318 aa17.82■□□□□ 0.44
PRKDC-207ENST00000536483 BARGINQ6ZT62 677 aa17.82■□□□□ 0.44
PRKDC-207ENST00000536483 NLRP13Q86W25 1043 aa17.82■□□□□ 0.44
PRKDC-207ENST00000536483 CAMTA1Q9Y6Y1 1673 aa17.82■□□□□ 0.44
PRKDC-207ENST00000536483 NRKQ7Z2Y5 1582 aa17.82■□□□□ 0.44
PRKDC-207ENST00000536483 GCP02774 474 aa17.81■□□□□ 0.44
PRKDC-207ENST00000536483 PDE3BQ13370 1112 aa17.81■□□□□ 0.44
PRKDC-207ENST00000536483 CAMKK2Q96RR4 588 aa17.81■□□□□ 0.44
PRKDC-207ENST00000536483 TNS1Q9HBL0 1735 aaKnown RBP17.81■□□□□ 0.44
PRKDC-207ENST00000536483 CPDO75976 1380 aa17.8■□□□□ 0.44
PRKDC-207ENST00000536483 TRPM1Q7Z4N2 1603 aa17.8■□□□□ 0.44
PRKDC-207ENST00000536483 APBA3O96018 575 aa17.8■□□□□ 0.44
PRKDC-207ENST00000536483 TCP11L2Q8N4U5 519 aa17.8■□□□□ 0.44
PRKDC-207ENST00000536483 CABP1Q9NZU7 370 aa17.78■□□□□ 0.44
PRKDC-207ENST00000536483 ZBTB7CA1YPR0 619 aa17.77■□□□□ 0.44
PRKDC-207ENST00000536483 ROCK2O75116 1388 aaKnown RBP17.77■□□□□ 0.43
PRKDC-207ENST00000536483 LMO7Q8WWI1 1683 aa17.77■□□□□ 0.43
PRKDC-207ENST00000536483 THRAP3Q9Y2W1 955 aaKnown RBP17.76■□□□□ 0.43
PRKDC-207ENST00000536483 TONSLQ96HA7 1378 aa17.76■□□□□ 0.43
PRKDC-207ENST00000536483 CLSPNQ9HAW4 1339 aa17.75■□□□□ 0.43
PRKDC-207ENST00000536483 NLRP6P59044 892 aa17.75■□□□□ 0.43
PRKDC-207ENST00000536483 BRD4O60885 1362 aaPredicted RBP17.75■□□□□ 0.43
PRKDC-207ENST00000536483 USP6P35125 1406 aa17.74■□□□□ 0.43
PRKDC-207ENST00000536483 PARD3Q8TEW0 1356 aa17.74■□□□□ 0.43
PRKDC-207ENST00000536483 COL5A2P05997 1499 aaPredicted RBP17.74■□□□□ 0.43
PRKDC-207ENST00000536483 SBNO2Q9Y2G9 1366 aa17.73■□□□□ 0.43
PRKDC-207ENST00000536483 QRICH2Q9H0J4 1663 aa17.73■□□□□ 0.43
PRKDC-207ENST00000536483 TIMELESSQ9UNS1 1208 aa17.72■□□□□ 0.43
PRKDC-207ENST00000536483 CRB1P82279 1406 aa17.71■□□□□ 0.43
PRKDC-207ENST00000536483 EVC2Q86UK5 1308 aa17.71■□□□□ 0.42
PRKDC-207ENST00000536483 AATKQ6ZMQ8 1374 aa17.7■□□□□ 0.42
PRKDC-207ENST00000536483 SLIT3O75094 1523 aa17.69■□□□□ 0.42
PRKDC-207ENST00000536483 NBPF14Q5TI25 921 aa17.69■□□□□ 0.42
PRKDC-207ENST00000536483 TOM1L2Q6ZVM7 507 aa17.69■□□□□ 0.42
PRKDC-207ENST00000536483 CARD11Q9BXL7 1154 aa17.68■□□□□ 0.42
PRKDC-207ENST00000536483 AXIN2Q9Y2T1 843 aa17.68■□□□□ 0.42
PRKDC-207ENST00000536483 PARP4Q9UKK3 1724 aaKnown RBP17.67■□□□□ 0.42
PRKDC-207ENST00000536483 RREB1Q92766 1687 aa17.67■□□□□ 0.42
PRKDC-207ENST00000536483 C11orf95C9JLR9 678 aaPredicted RBP17.66■□□□□ 0.42
PRKDC-207ENST00000536483 DDB1Q16531 1140 aa17.66■□□□□ 0.42
PRKDC-207ENST00000536483 ZNF692Q9BU19 519 aaPredicted RBP17.66■□□□□ 0.42
PRKDC-207ENST00000536483 TTC21BQ7Z4L5 1316 aa17.66■□□□□ 0.42
PRKDC-207ENST00000536483 OVOS2A0A0G2JMS6 1433 aa17.65■□□□□ 0.42
PRKDC-207ENST00000536483 OVOS2A0A0J9YW53 1432 aa17.65■□□□□ 0.42
PRKDC-207ENST00000536483 OVOS2Q6IE36 1432 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms