RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 NME9Q86XW9 330 aa15.7■□□□□ 0.1
CDCA3-206ENST00000536241 ZRANB1Q9UGI0 708 aa15.7■□□□□ 0.1
CDCA3-206ENST00000536241 AKAP12Q02952 1782 aa15.7■□□□□ 0.1
CDCA3-206ENST00000536241 PIP4K2BP78356 416 aa15.69■□□□□ 0.1
CDCA3-206ENST00000536241 SSH2Q76I76 1423 aa15.68■□□□□ 0.1
CDCA3-206ENST00000536241 NPHP3Q7Z494 1330 aa15.68■□□□□ 0.1
CDCA3-206ENST00000536241 NPC1L1Q9UHC9 1359 aa15.68■□□□□ 0.1
CDCA3-206ENST00000536241 RALBP1Q15311 655 aa15.67■□□□□ 0.1
CDCA3-206ENST00000536241 MORC1Q86VD1 984 aa15.67■□□□□ 0.1
CDCA3-206ENST00000536241 ABTB2Q8N961 1025 aa15.67■□□□□ 0.1
CDCA3-206ENST00000536241 MON2Q7Z3U7 1717 aa15.67■□□□□ 0.1
CDCA3-206ENST00000536241 NUTM2GQ5VZR2 741 aa15.66■□□□□ 0.1
CDCA3-206ENST00000536241 TTC21AQ8NDW8 1320 aa15.66■□□□□ 0.1
CDCA3-206ENST00000536241 SCAF1Q9H7N4 1312 aaKnown RBP15.66■□□□□ 0.1
CDCA3-206ENST00000536241 TNNT2P45379 298 aaPredicted RBP15.65■□□□□ 0.1
CDCA3-206ENST00000536241 LMOD2Q6P5Q4 547 aa15.65■□□□□ 0.1
CDCA3-206ENST00000536241 KIF1AQ12756 1690 aa15.65■□□□□ 0.1
CDCA3-206ENST00000536241 IQSEC2Q5JU85 1478 aa15.65■□□□□ 0.1
CDCA3-206ENST00000536241 BRD4O60885 1362 aaPredicted RBP15.65■□□□□ 0.1
CDCA3-206ENST00000536241 NLRP6P59044 892 aa15.65■□□□□ 0.1
CDCA3-206ENST00000536241 COG3Q96JB2 828 aa15.65■□□□□ 0.1
CDCA3-206ENST00000536241 NSD2O96028 1365 aa15.63■□□□□ 0.09
CDCA3-206ENST00000536241 PARD3Q8TEW0 1356 aa15.63■□□□□ 0.09
CDCA3-206ENST00000536241 SOS2Q07890 1332 aaPredicted RBP15.63■□□□□ 0.09
CDCA3-206ENST00000536241 FBLN1P23142 703 aa15.63■□□□□ 0.09
CDCA3-206ENST00000536241 NRKQ7Z2Y5 1582 aa15.61■□□□□ 0.09
CDCA3-206ENST00000536241 PLEKHG5O94827 1062 aa15.61■□□□□ 0.09
CDCA3-206ENST00000536241 NLRP13Q86W25 1043 aa15.61■□□□□ 0.09
CDCA3-206ENST00000536241 ROBO1Q9Y6N7 1651 aa15.61■□□□□ 0.09
CDCA3-206ENST00000536241 SPATA31A3Q5VYP0 1347 aa15.6■□□□□ 0.09
CDCA3-206ENST00000536241 PPP2R1AP30153 589 aa15.6■□□□□ 0.09
CDCA3-206ENST00000536241 SBNO1A3KN83 1393 aa15.6■□□□□ 0.09
CDCA3-206ENST00000536241 USP31Q70CQ4 1352 aa15.6■□□□□ 0.09
CDCA3-206ENST00000536241 MYBBP1AQ9BQG0 1328 aaKnown RBP15.6■□□□□ 0.09
CDCA3-206ENST00000536241 PXDNQ92626 1479 aa15.59■□□□□ 0.09
CDCA3-206ENST00000536241 CCDC184Q52MB2 194 aa15.59■□□□□ 0.09
CDCA3-206ENST00000536241 KIF20BQ96Q89 1820 aa15.59■□□□□ 0.09
CDCA3-206ENST00000536241 SOX12O15370 315 aa15.59■□□□□ 0.09
CDCA3-206ENST00000536241 LRRC59Q96AG4 307 aaKnown RBP15.58■□□□□ 0.08
CDCA3-206ENST00000536241 TRPM3Q9HCF6 1732 aaPredicted RBP15.58■□□□□ 0.08
CDCA3-206ENST00000536241 PIK3C2AO00443 1686 aa15.56■□□□□ 0.08
CDCA3-206ENST00000536241 OVOS2A0A0J9YW53 1432 aa15.56■□□□□ 0.08
CDCA3-206ENST00000536241 OVOS2Q6IE36 1432 aa15.56■□□□□ 0.08
CDCA3-206ENST00000536241 CCER2I3L3R5 266 aa15.56■□□□□ 0.08
CDCA3-206ENST00000536241 MTHFSP49914 203 aa15.56■□□□□ 0.08
CDCA3-206ENST00000536241 CABLES1Q8TDN4 633 aa15.56■□□□□ 0.08
CDCA3-206ENST00000536241 TNS3Q68CZ2 1445 aa15.55■□□□□ 0.08
CDCA3-206ENST00000536241 NHSL1Q5SYE7 1610 aa15.55■□□□□ 0.08
CDCA3-206ENST00000536241 RRS1Q15050 365 aaKnown RBP15.55■□□□□ 0.08
CDCA3-206ENST00000536241 POLKQ9UBT6 870 aa15.55■□□□□ 0.08
CDCA3-206ENST00000536241 GCP02774 474 aa15.54■□□□□ 0.08
CDCA3-206ENST00000536241 ANKRD26Q9UPS8 1709 aa15.54■□□□□ 0.08
CDCA3-206ENST00000536241 ARHGEF10O15013 1369 aa15.53■□□□□ 0.08
CDCA3-206ENST00000536241 PPM1GO15355 546 aaPredicted RBP15.53■□□□□ 0.08
CDCA3-206ENST00000536241 MRS2Q9HD23 443 aa15.53■□□□□ 0.08
CDCA3-206ENST00000536241 ALS2Q96Q42 1657 aa15.53■□□□□ 0.08
CDCA3-206ENST00000536241 KCNH5Q8NCM2 988 aa15.52■□□□□ 0.08
CDCA3-206ENST00000536241 EMILIN1Q9Y6C2 1016 aa15.52■□□□□ 0.08
CDCA3-206ENST00000536241 AHDC1Q5TGY3 1603 aaPredicted RBP15.52■□□□□ 0.08
CDCA3-206ENST00000536241 AATKQ6ZMQ8 1374 aa15.52■□□□□ 0.07
CDCA3-206ENST00000536241 USP19O94966 1318 aa15.51■□□□□ 0.07
CDCA3-206ENST00000536241 MAP2P11137 1827 aaKnown RBP15.51■□□□□ 0.07
CDCA3-206ENST00000536241 PHLPP1O60346 1717 aa15.5■□□□□ 0.07
CDCA3-206ENST00000536241 MARF1Q9Y4F3 1742 aaKnown RBP15.5■□□□□ 0.07
CDCA3-206ENST00000536241 ZC3H6P61129 1189 aaKnown RBP15.5■□□□□ 0.07
CDCA3-206ENST00000536241 MAP3K19Q56UN5 1328 aa15.5■□□□□ 0.07
CDCA3-206ENST00000536241 ZBTB7CA1YPR0 619 aa15.49■□□□□ 0.07
CDCA3-206ENST00000536241 HSPA1LP34931 641 aa15.49■□□□□ 0.07
CDCA3-206ENST00000536241 AMPHP49418 695 aa15.48■□□□□ 0.07
CDCA3-206ENST00000536241 HAP1P54257 671 aaPredicted RBP15.48■□□□□ 0.07
CDCA3-206ENST00000536241 MED1Q15648 1581 aaPredicted RBP15.48■□□□□ 0.07
CDCA3-206ENST00000536241 ARHGEF25Q86VW2 580 aa15.47■□□□□ 0.07
CDCA3-206ENST00000536241 CFAP53Q96M91 514 aa15.47■□□□□ 0.07
CDCA3-206ENST00000536241 USP54Q70EL1 1684 aa15.47■□□□□ 0.07
CDCA3-206ENST00000536241 PNISRQ8TF01 805 aaKnown RBP15.46■□□□□ 0.07
CDCA3-206ENST00000536241 COL16A1Q07092 1604 aaPredicted RBP15.46■□□□□ 0.07
CDCA3-206ENST00000536241 PNPLA6Q8IY17 1366 aa15.46■□□□□ 0.07
CDCA3-206ENST00000536241 SLIT3O75094 1523 aa15.46■□□□□ 0.07
CDCA3-206ENST00000536241 HSP90AB2PQ58FF8 381 aa15.46■□□□□ 0.06
CDCA3-206ENST00000536241 FAM9BQ8IZU0 186 aa15.46■□□□□ 0.06
CDCA3-206ENST00000536241 HOXC9P31274 260 aa15.44■□□□□ 0.06
CDCA3-206ENST00000536241 IP6K1Q92551 441 aa15.44■□□□□ 0.06
CDCA3-206ENST00000536241 NFAT5O94916 1531 aa15.44■□□□□ 0.06
CDCA3-206ENST00000536241 NUTM2BA6NNL0 878 aaPredicted RBP15.43■□□□□ 0.06
CDCA3-206ENST00000536241 NUTM2EB1AL46 878 aaPredicted RBP15.43■□□□□ 0.06
CDCA3-206ENST00000536241 DIAPH1O60610 1272 aaKnown RBP15.43■□□□□ 0.06
CDCA3-206ENST00000536241 INSRP06213 1382 aa15.43■□□□□ 0.06
CDCA3-206ENST00000536241 CHRNA2Q15822 529 aa15.43■□□□□ 0.06
CDCA3-206ENST00000536241 NUTM2AQ8IVF1 878 aaPredicted RBP15.43■□□□□ 0.06
CDCA3-206ENST00000536241 AXIN2Q9Y2T1 843 aa15.42■□□□□ 0.06
CDCA3-206ENST00000536241 SMG6Q86US8 1419 aaKnown RBP15.41■□□□□ 0.06
CDCA3-206ENST00000536241 KIAA0232Q92628 1395 aa15.41■□□□□ 0.06
CDCA3-206ENST00000536241 JCADQ9P266 1359 aa15.41■□□□□ 0.06
CDCA3-206ENST00000536241 IL13P35225 146 aa15.41■□□□□ 0.06
CDCA3-206ENST00000536241 FLT4P35916 1363 aa15.41■□□□□ 0.06
CDCA3-206ENST00000536241 FAM83GA6ND36 823 aa15.4■□□□□ 0.06
CDCA3-206ENST00000536241 U2SURPO15042 1029 aaKnown RBP15.4■□□□□ 0.06
CDCA3-206ENST00000536241 EIF4A2Q14240 407 aaKnown RBP15.4■□□□□ 0.06
CDCA3-206ENST00000536241 LTV1Q96GA3 475 aaPredicted RBP15.4■□□□□ 0.06
CDCA3-206ENST00000536241 PRDM11Q9NQV5 511 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms