RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 TIMELESSQ9UNS1 1208 aa19.6■□□□□ 0.73
TMEM258-203ENST00000535297 SLIT2O94813 1529 aa19.59■□□□□ 0.73
TMEM258-203ENST00000535297 ATRNO75882 1429 aa19.59■□□□□ 0.73
TMEM258-203ENST00000535297 PAK3O75914 559 aaPredicted RBP19.58■□□□□ 0.72
TMEM258-203ENST00000535297 CABLES1Q8TDN4 633 aa19.58■□□□□ 0.72
TMEM258-203ENST00000535297 QTRT2Q9H974 415 aaKnown RBP19.58■□□□□ 0.72
TMEM258-203ENST00000535297 BCL9LQ86UU0 1499 aa19.58■□□□□ 0.72
TMEM258-203ENST00000535297 PLCH1Q4KWH8 1693 aa19.58■□□□□ 0.72
TMEM258-203ENST00000535297 BRD4O60885 1362 aaPredicted RBP19.57■□□□□ 0.72
TMEM258-203ENST00000535297 ATAD2Q6PL18 1390 aa19.57■□□□□ 0.72
TMEM258-203ENST00000535297 NWD2Q9ULI1 1742 aa19.57■□□□□ 0.72
TMEM258-203ENST00000535297 RBM6P78332 1123 aaKnown RBP19.57■□□□□ 0.72
TMEM258-203ENST00000535297 TRPC5Q9UL62 973 aaPredicted RBP19.57■□□□□ 0.72
TMEM258-203ENST00000535297 PHRF1Q9P1Y6 1649 aaKnown RBP19.56■□□□□ 0.72
TMEM258-203ENST00000535297 USP6P35125 1406 aa19.54■□□□□ 0.72
TMEM258-203ENST00000535297 PLEKHG5O94827 1062 aa19.54■□□□□ 0.72
TMEM258-203ENST00000535297 CABP1Q9NZU7 370 aa19.54■□□□□ 0.72
TMEM258-203ENST00000535297 AKAP12Q02952 1782 aa19.54■□□□□ 0.72
TMEM258-203ENST00000535297 RGS12O14924 1447 aa19.53■□□□□ 0.72
TMEM258-203ENST00000535297 COL14A1Q05707 1796 aaKnown RBP19.53■□□□□ 0.72
TMEM258-203ENST00000535297 UNC5CLQ8IV45 518 aa19.51■□□□□ 0.71
TMEM258-203ENST00000535297 CCER1Q8TC90 406 aaPredicted RBP19.51■□□□□ 0.71
TMEM258-203ENST00000535297 NRAPQ86VF7 1730 aa19.51■□□□□ 0.71
TMEM258-203ENST00000535297 NRKQ7Z2Y5 1582 aa19.5■□□□□ 0.71
TMEM258-203ENST00000535297 SSH2Q76I76 1423 aa19.5■□□□□ 0.71
TMEM258-203ENST00000535297 USP19O94966 1318 aa19.49■□□□□ 0.71
TMEM258-203ENST00000535297 MON2Q7Z3U7 1717 aa19.48■□□□□ 0.71
TMEM258-203ENST00000535297 USP47Q96K76 1375 aa19.48■□□□□ 0.71
TMEM258-203ENST00000535297 SLC24A1O60721 1099 aa19.48■□□□□ 0.71
TMEM258-203ENST00000535297 ABTB2Q8N961 1025 aa19.48■□□□□ 0.71
TMEM258-203ENST00000535297 CPSF1Q10570 1443 aaKnown RBP19.48■□□□□ 0.71
TMEM258-203ENST00000535297 GLI3P10071 1580 aa19.48■□□□□ 0.71
TMEM258-203ENST00000535297 PIK3C2AO00443 1686 aa19.47■□□□□ 0.71
TMEM258-203ENST00000535297 ST20-MTHFSA0A0A6YYL1 179 aa19.47■□□□□ 0.71
TMEM258-203ENST00000535297 FAM83GA6ND36 823 aa19.47■□□□□ 0.71
TMEM258-203ENST00000535297 PUS7Q96PZ0 661 aaKnown RBP19.47■□□□□ 0.71
TMEM258-203ENST00000535297 TESK2Q96S53 571 aa19.47■□□□□ 0.71
TMEM258-203ENST00000535297 ZNF692Q9BU19 519 aaPredicted RBP19.47■□□□□ 0.71
TMEM258-203ENST00000535297 NUTM2GQ5VZR2 741 aa19.46■□□□□ 0.71
TMEM258-203ENST00000535297 GJD4Q96KN9 370 aaPredicted RBP19.46■□□□□ 0.71
TMEM258-203ENST00000535297 NLRP13Q86W25 1043 aa19.45■□□□□ 0.7
TMEM258-203ENST00000535297 PRDM11Q9NQV5 511 aa19.45■□□□□ 0.7
TMEM258-203ENST00000535297 KIAA0232Q92628 1395 aa19.44■□□□□ 0.7
TMEM258-203ENST00000535297 VPS72Q15906 364 aa19.44■□□□□ 0.7
TMEM258-203ENST00000535297 SLIT3O75094 1523 aa19.44■□□□□ 0.7
TMEM258-203ENST00000535297 KTN1Q86UP2 1357 aaKnown RBP19.44■□□□□ 0.7
TMEM258-203ENST00000535297 CD163L1Q9NR16 1453 aa19.43■□□□□ 0.7
TMEM258-203ENST00000535297 TTC21AQ8NDW8 1320 aa19.43■□□□□ 0.7
TMEM258-203ENST00000535297 CPDO75976 1380 aa19.43■□□□□ 0.7
TMEM258-203ENST00000535297 NINLQ9Y2I6 1382 aa19.43■□□□□ 0.7
TMEM258-203ENST00000535297 BTG4Q9NY30 223 aa19.42■□□□□ 0.7
TMEM258-203ENST00000535297 TTC21BQ7Z4L5 1316 aa19.42■□□□□ 0.7
TMEM258-203ENST00000535297 LMO7Q8WWI1 1683 aa19.4■□□□□ 0.7
TMEM258-203ENST00000535297 NLRP6P59044 892 aa19.4■□□□□ 0.7
TMEM258-203ENST00000535297 USP54Q70EL1 1684 aa19.4■□□□□ 0.7
TMEM258-203ENST00000535297 ZC3H6P61129 1189 aaKnown RBP19.39■□□□□ 0.69
TMEM258-203ENST00000535297 HDGFL2Q7Z4V5 671 aaPredicted RBP19.39■□□□□ 0.69
TMEM258-203ENST00000535297 TMC1Q8TDI8 760 aa19.39■□□□□ 0.69
TMEM258-203ENST00000535297 GCP02774 474 aa19.38■□□□□ 0.69
TMEM258-203ENST00000535297 TMF1P82094 1093 aa19.38■□□□□ 0.69
TMEM258-203ENST00000535297 CCDC9Q9Y3X0 531 aaKnown RBP19.38■□□□□ 0.69
TMEM258-203ENST00000535297 EDC4Q6P2E9 1401 aaKnown RBP19.37■□□□□ 0.69
TMEM258-203ENST00000535297 A0A1W2PP64 1363 aa19.37■□□□□ 0.69
TMEM258-203ENST00000535297 CHRNA2Q15822 529 aa19.37■□□□□ 0.69
TMEM258-203ENST00000535297 SLC12A5Q9H2X9 1139 aa19.37■□□□□ 0.69
TMEM258-203ENST00000535297 TERF2IPQ9NYB0 399 aa19.37■□□□□ 0.69
TMEM258-203ENST00000535297 UPF1Q92900 1129 aaKnown RBP eCLIP19.36■□□□□ 0.69
TMEM258-203ENST00000535297 BRWD3Q6RI45 1802 aa19.35■□□□□ 0.69
TMEM258-203ENST00000535297 USP31Q70CQ4 1352 aa19.34■□□□□ 0.69
TMEM258-203ENST00000535297 CAMTA1Q9Y6Y1 1673 aa19.34■□□□□ 0.69
TMEM258-203ENST00000535297 SPATA31A5Q5VU36 1347 aa19.34■□□□□ 0.69
TMEM258-203ENST00000535297 SPATA31A7Q8IWB4 1347 aa19.34■□□□□ 0.69
TMEM258-203ENST00000535297 ONECUT3O60422 494 aaPredicted RBP19.33■□□□□ 0.68
TMEM258-203ENST00000535297 CDCA8Q53HL2 280 aa19.33■□□□□ 0.68
TMEM258-203ENST00000535297 KCNH5Q8NCM2 988 aa19.33■□□□□ 0.68
TMEM258-203ENST00000535297 NFAT5O94916 1531 aa19.33■□□□□ 0.68
TMEM258-203ENST00000535297 SEPT12Q8IYM1 358 aa19.32■□□□□ 0.68
TMEM258-203ENST00000535297 THSD7AQ9UPZ6 1657 aa19.32■□□□□ 0.68
TMEM258-203ENST00000535297 COL18A1P39060 1754 aa19.32■□□□□ 0.68
TMEM258-203ENST00000535297 AATKQ6ZMQ8 1374 aa19.32■□□□□ 0.68
TMEM258-203ENST00000535297 ANKRD36BQ8N2N9 1353 aa19.32■□□□□ 0.68
TMEM258-203ENST00000535297 COL5A2P05997 1499 aaPredicted RBP19.31■□□□□ 0.68
TMEM258-203ENST00000535297 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.31■□□□□ 0.68
TMEM258-203ENST00000535297 ABCC6O95255 1503 aa19.3■□□□□ 0.68
TMEM258-203ENST00000535297 STRN4Q9NRL3 753 aa19.3■□□□□ 0.68
TMEM258-203ENST00000535297 MYOM1P52179 1685 aa19.3■□□□□ 0.68
TMEM258-203ENST00000535297 SPATA31A1Q5TZJ5 1347 aa19.29■□□□□ 0.68
TMEM258-203ENST00000535297 NME9Q86XW9 330 aa19.29■□□□□ 0.68
TMEM258-203ENST00000535297 OVOS2A0A0J9YW53 1432 aa19.28■□□□□ 0.68
TMEM258-203ENST00000535297 OVOS2Q6IE36 1432 aa19.28■□□□□ 0.68
TMEM258-203ENST00000535297 EVA1CP58658 441 aa19.28■□□□□ 0.68
TMEM258-203ENST00000535297 FAM98CQ17RN3 349 aaKnown RBP19.28■□□□□ 0.68
TMEM258-203ENST00000535297 ZBTB7CA1YPR0 619 aa19.27■□□□□ 0.68
TMEM258-203ENST00000535297 ARHGEF25Q86VW2 580 aa19.27■□□□□ 0.68
TMEM258-203ENST00000535297 A0A0G2JS52 829 aa19.26■□□□□ 0.67
TMEM258-203ENST00000535297 EIF4G2P78344 907 aaKnown RBP eCLIP19.26■□□□□ 0.67
TMEM258-203ENST00000535297 MYT1Q01538 1121 aa19.26■□□□□ 0.67
TMEM258-203ENST00000535297 ZRANB1Q9UGI0 708 aa19.26■□□□□ 0.67
TMEM258-203ENST00000535297 CRB1P82279 1406 aa19.25■□□□□ 0.67
TMEM258-203ENST00000535297 LTN1O94822 1766 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms