RNA–Protein interactions for RNA: ENST00000535286.5

TDRD3-208, Transcript of tudor domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDRD3, Length 2,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3-208ENST00000535286 SHPRHQ149N8 1683 aa13.79□□□□□ -0.2
TDRD3-208ENST00000535286 AATKQ6ZMQ8 1374 aa13.79□□□□□ -0.2
TDRD3-208ENST00000535286 TTC21BQ7Z4L5 1316 aa13.78□□□□□ -0.2
TDRD3-208ENST00000535286 RGPD8O14715 1765 aaPredicted RBP13.78□□□□□ -0.2
TDRD3-208ENST00000535286 NGDNQ8NEJ9 315 aaKnown RBP13.78□□□□□ -0.2
TDRD3-208ENST00000535286 NUTM2FA1L443 756 aa13.77□□□□□ -0.21
TDRD3-208ENST00000535286 NCOA3Q9Y6Q9 1424 aa13.76□□□□□ -0.21
TDRD3-208ENST00000535286 SSH2Q76I76 1423 aa13.76□□□□□ -0.21
TDRD3-208ENST00000535286 PNPLA6Q8IY17 1366 aa13.76□□□□□ -0.21
TDRD3-208ENST00000535286 NME9Q86XW9 330 aa13.76□□□□□ -0.21
TDRD3-208ENST00000535286 C14orf37Q86TY3 774 aa13.76□□□□□ -0.21
TDRD3-208ENST00000535286 PROSER2Q86WR7 435 aaPredicted RBP13.76□□□□□ -0.21
TDRD3-208ENST00000535286 PNNQ9H307 717 aaKnown RBP13.75□□□□□ -0.21
TDRD3-208ENST00000535286 LMTK3Q96Q04 1460 aa13.75□□□□□ -0.21
TDRD3-208ENST00000535286 MAP2P11137 1827 aaKnown RBP13.74□□□□□ -0.21
TDRD3-208ENST00000535286 NCBP3Q53F19 620 aaKnown RBP13.74□□□□□ -0.21
TDRD3-208ENST00000535286 RUNDC1Q96C34 613 aa13.74□□□□□ -0.21
TDRD3-208ENST00000535286 COL3A1P02461 1466 aaPredicted RBP13.74□□□□□ -0.21
TDRD3-208ENST00000535286 PMFBP1Q8TBY8 1022 aa13.74□□□□□ -0.21
TDRD3-208ENST00000535286 DIAPH1O60610 1272 aaKnown RBP13.73□□□□□ -0.21
TDRD3-208ENST00000535286 POLKQ9UBT6 870 aa13.73□□□□□ -0.21
TDRD3-208ENST00000535286 OVOS2A0A0J9YW53 1432 aa13.73□□□□□ -0.21
TDRD3-208ENST00000535286 OVOS2Q6IE36 1432 aa13.73□□□□□ -0.21
TDRD3-208ENST00000535286 CDK12Q9NYV4 1490 aaPredicted RBP13.73□□□□□ -0.21
TDRD3-208ENST00000535286 PHF8Q9UPP1 1060 aa13.73□□□□□ -0.21
TDRD3-208ENST00000535286 USP31Q70CQ4 1352 aa13.72□□□□□ -0.21
TDRD3-208ENST00000535286 C19orf44Q9H6X5 657 aa13.72□□□□□ -0.21
TDRD3-208ENST00000535286 U2AF1L5P0DN76 240 aaPredicted RBP13.72□□□□□ -0.21
TDRD3-208ENST00000535286 U2AF1Q01081 240 aaKnown RBP eCLIP13.72□□□□□ -0.21
TDRD3-208ENST00000535286 DCCP43146 1447 aa13.71□□□□□ -0.21
TDRD3-208ENST00000535286 SALL2Q9Y467 1007 aaPredicted RBP13.71□□□□□ -0.21
TDRD3-208ENST00000535286 SUPT16HQ9Y5B9 1047 aaKnown RBP13.71□□□□□ -0.21
TDRD3-208ENST00000535286 HSPA2P54652 639 aa13.71□□□□□ -0.22
TDRD3-208ENST00000535286 CCDC146Q8IYE0 955 aa13.71□□□□□ -0.22
TDRD3-208ENST00000535286 LRRC7Q96NW7 1537 aa13.7□□□□□ -0.22
TDRD3-208ENST00000535286 APAF1O14727 1248 aa13.7□□□□□ -0.22
TDRD3-208ENST00000535286 USP54Q70EL1 1684 aa13.7□□□□□ -0.22
TDRD3-208ENST00000535286 ZNF521Q96K83 1311 aa13.69□□□□□ -0.22
TDRD3-208ENST00000535286 GOLGA2Q08379 1002 aa13.69□□□□□ -0.22
TDRD3-208ENST00000535286 ERICH6BQ5W0A0 696 aa13.69□□□□□ -0.22
TDRD3-208ENST00000535286 STRCQ7RTU9 1775 aa13.69□□□□□ -0.22
TDRD3-208ENST00000535286 U2SURPO15042 1029 aaKnown RBP13.69□□□□□ -0.22
TDRD3-208ENST00000535286 ZRANB1Q9UGI0 708 aa13.69□□□□□ -0.22
TDRD3-208ENST00000535286 KIF1AQ12756 1690 aa13.69□□□□□ -0.22
TDRD3-208ENST00000535286 PPM1GO15355 546 aaPredicted RBP13.68□□□□□ -0.22
TDRD3-208ENST00000535286 FKBP8Q14318 412 aa13.68□□□□□ -0.22
TDRD3-208ENST00000535286 ESCO1Q5FWF5 840 aa13.68□□□□□ -0.22
TDRD3-208ENST00000535286 FCHSD2O94868 740 aa13.67□□□□□ -0.22
TDRD3-208ENST00000535286 NEFMP07197 916 aa13.67□□□□□ -0.22
TDRD3-208ENST00000535286 CCDC27Q2M243 656 aa13.67□□□□□ -0.22
TDRD3-208ENST00000535286 IQSEC2Q5JU85 1478 aa13.67□□□□□ -0.22
TDRD3-208ENST00000535286 PIK3C2AO00443 1686 aa13.67□□□□□ -0.22
TDRD3-208ENST00000535286 SENP3-EIF4A1A0A087X0R7 540 aa13.67□□□□□ -0.22
TDRD3-208ENST00000535286 ATF3P18847 181 aa13.67□□□□□ -0.22
TDRD3-208ENST00000535286 RBM33Q96EV2 1170 aaKnown RBP13.67□□□□□ -0.22
TDRD3-208ENST00000535286 STRCP1A6NGW2 1772 aa13.66□□□□□ -0.22
TDRD3-208ENST00000535286 TMEM94Q12767 1356 aa13.66□□□□□ -0.22
TDRD3-208ENST00000535286 PSME1Q06323 249 aa13.66□□□□□ -0.22
TDRD3-208ENST00000535286 TCP11L2Q8N4U5 519 aa13.66□□□□□ -0.22
TDRD3-208ENST00000535286 EMILIN1Q9Y6C2 1016 aa13.66□□□□□ -0.22
TDRD3-208ENST00000535286 MAPK8IP3Q9UPT6 1336 aa13.66□□□□□ -0.22
TDRD3-208ENST00000535286 KIF24Q5T7B8 1368 aa13.65□□□□□ -0.22
TDRD3-208ENST00000535286 CADPS2Q86UW7 1296 aa13.65□□□□□ -0.22
TDRD3-208ENST00000535286 DMRT2Q9Y5R5 561 aa13.65□□□□□ -0.22
TDRD3-208ENST00000535286 E9PSI1 815 aa13.65□□□□□ -0.22
TDRD3-208ENST00000535286 NLRP6P59044 892 aa13.65□□□□□ -0.22
TDRD3-208ENST00000535286 C1orf167Q5SNV9 1468 aa13.64□□□□□ -0.23
TDRD3-208ENST00000535286 ABTB2Q8N961 1025 aa13.64□□□□□ -0.23
TDRD3-208ENST00000535286 IL13P35225 146 aa13.64□□□□□ -0.23
TDRD3-208ENST00000535286 MSH6P52701 1360 aa13.64□□□□□ -0.23
TDRD3-208ENST00000535286 RRS1Q15050 365 aaKnown RBP13.64□□□□□ -0.23
TDRD3-208ENST00000535286 RNF123Q5XPI4 1314 aa13.64□□□□□ -0.23
TDRD3-208ENST00000535286 WDR63Q8IWG1 891 aa13.64□□□□□ -0.23
TDRD3-208ENST00000535286 CDCA7LQ96GN5 454 aa13.64□□□□□ -0.23
TDRD3-208ENST00000535286 PAK3O75914 559 aaPredicted RBP13.63□□□□□ -0.23
TDRD3-208ENST00000535286 SLFN5Q08AF3 891 aa13.63□□□□□ -0.23
TDRD3-208ENST00000535286 WWC1Q8IX03 1113 aa13.63□□□□□ -0.23
TDRD3-208ENST00000535286 PLEKHF1Q96S99 279 aa13.63□□□□□ -0.23
TDRD3-208ENST00000535286 RCAN3Q9UKA8 241 aa13.63□□□□□ -0.23
TDRD3-208ENST00000535286 SBNO1A3KN83 1393 aa13.63□□□□□ -0.23
TDRD3-208ENST00000535286 PHF23Q9BUL5 403 aaPredicted RBP13.63□□□□□ -0.23
TDRD3-208ENST00000535286 FBLN1P23142 703 aa13.62□□□□□ -0.23
TDRD3-208ENST00000535286 FLT4P35916 1363 aa13.62□□□□□ -0.23
TDRD3-208ENST00000535286 TRMT2AQ8IZ69 625 aaKnown RBP13.62□□□□□ -0.23
TDRD3-208ENST00000535286 MST1RQ04912 1400 aa13.61□□□□□ -0.23
TDRD3-208ENST00000535286 DUSP27Q5VZP5 1158 aa13.61□□□□□ -0.23
TDRD3-208ENST00000535286 KCNH5Q8NCM2 988 aa13.61□□□□□ -0.23
TDRD3-208ENST00000535286 ORAI2Q96SN7 254 aa13.6□□□□□ -0.23
TDRD3-208ENST00000535286 RSPH6AQ9H0K4 717 aa13.6□□□□□ -0.23
TDRD3-208ENST00000535286 MARF1Q9Y4F3 1742 aaKnown RBP13.6□□□□□ -0.23
TDRD3-208ENST00000535286 MAP3K19Q56UN5 1328 aa13.59□□□□□ -0.23
TDRD3-208ENST00000535286 TMPOP42166 694 aaKnown RBP13.59□□□□□ -0.23
TDRD3-208ENST00000535286 AMPHP49418 695 aa13.59□□□□□ -0.23
TDRD3-208ENST00000535286 NEUROD2Q15784 382 aa13.59□□□□□ -0.23
TDRD3-208ENST00000535286 RTL1A6NKG5 1358 aa13.59□□□□□ -0.23
TDRD3-208ENST00000535286 PEAK1Q9H792 1746 aa13.59□□□□□ -0.23
TDRD3-208ENST00000535286 FOXO3O43524 673 aa13.58□□□□□ -0.24
TDRD3-208ENST00000535286 PRKAR2BP31323 418 aa13.58□□□□□ -0.24
TDRD3-208ENST00000535286 XIRP1Q702N8 1843 aaKnown RBP13.58□□□□□ -0.24
TDRD3-208ENST00000535286 EIF4A2Q14240 407 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms