RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 GLI3P10071 1580 aa12.26□□□□□ -0.45
SFSWAP-202ENST00000535202 CRYBG1Q9Y4K1 1723 aa12.26□□□□□ -0.45
SFSWAP-202ENST00000535202 ATAD2Q6PL18 1390 aa12.26□□□□□ -0.45
SFSWAP-202ENST00000535202 SRPK2P78362 688 aaKnown RBP12.25□□□□□ -0.45
SFSWAP-202ENST00000535202 CCDC9Q9Y3X0 531 aaKnown RBP12.25□□□□□ -0.45
SFSWAP-202ENST00000535202 FAM83GA6ND36 823 aa12.24□□□□□ -0.45
SFSWAP-202ENST00000535202 ROCK2O75116 1388 aaKnown RBP12.24□□□□□ -0.45
SFSWAP-202ENST00000535202 ACEP12821 1306 aa12.24□□□□□ -0.45
SFSWAP-202ENST00000535202 COL14A1Q05707 1796 aaKnown RBP12.24□□□□□ -0.45
SFSWAP-202ENST00000535202 NRAPQ86VF7 1730 aa12.24□□□□□ -0.45
SFSWAP-202ENST00000535202 CCDC61Q9Y6R9 512 aa12.24□□□□□ -0.45
SFSWAP-202ENST00000535202 PHRF1Q9P1Y6 1649 aaKnown RBP12.23□□□□□ -0.45
SFSWAP-202ENST00000535202 PPIP5K1Q6PFW1 1433 aa12.23□□□□□ -0.45
SFSWAP-202ENST00000535202 POLR3AO14802 1390 aaPredicted RBP12.23□□□□□ -0.45
SFSWAP-202ENST00000535202 VPS72Q15906 364 aa12.23□□□□□ -0.45
SFSWAP-202ENST00000535202 CABP2Q9NPB3 220 aa12.23□□□□□ -0.45
SFSWAP-202ENST00000535202 NBPF8Q3BBV2 869 aa12.22□□□□□ -0.45
SFSWAP-202ENST00000535202 NUTM2GQ5VZR2 741 aa12.22□□□□□ -0.45
SFSWAP-202ENST00000535202 BRWD3Q6RI45 1802 aa12.22□□□□□ -0.45
SFSWAP-202ENST00000535202 PLEKHG3A1L390 1219 aa12.21□□□□□ -0.45
SFSWAP-202ENST00000535202 BTG4Q9NY30 223 aa12.21□□□□□ -0.45
SFSWAP-202ENST00000535202 TRIM26Q12899 539 aaPredicted RBP12.2□□□□□ -0.46
SFSWAP-202ENST00000535202 PRDM11Q9NQV5 511 aa12.2□□□□□ -0.46
SFSWAP-202ENST00000535202 A0A0G2JS52 829 aa12.19□□□□□ -0.46
SFSWAP-202ENST00000535202 SEPT12Q8IYM1 358 aa12.19□□□□□ -0.46
SFSWAP-202ENST00000535202 KIAA0232Q92628 1395 aa12.18□□□□□ -0.46
SFSWAP-202ENST00000535202 TONSLQ96HA7 1378 aa12.18□□□□□ -0.46
SFSWAP-202ENST00000535202 NRKQ7Z2Y5 1582 aa12.18□□□□□ -0.46
SFSWAP-202ENST00000535202 EVC2Q86UK5 1308 aa12.18□□□□□ -0.46
SFSWAP-202ENST00000535202 ABTB2Q8N961 1025 aa12.18□□□□□ -0.46
SFSWAP-202ENST00000535202 CABP1Q9NZU7 370 aa12.18□□□□□ -0.46
SFSWAP-202ENST00000535202 ZC3H6P61129 1189 aaKnown RBP12.17□□□□□ -0.46
SFSWAP-202ENST00000535202 CHRNA2Q15822 529 aa12.17□□□□□ -0.46
SFSWAP-202ENST00000535202 FAM98CQ17RN3 349 aaKnown RBP12.16□□□□□ -0.46
SFSWAP-202ENST00000535202 USP6P35125 1406 aa12.16□□□□□ -0.46
SFSWAP-202ENST00000535202 CARD11Q9BXL7 1154 aa12.15□□□□□ -0.46
SFSWAP-202ENST00000535202 STRN4Q9NRL3 753 aa12.15□□□□□ -0.46
SFSWAP-202ENST00000535202 AKAP12Q02952 1782 aa12.15□□□□□ -0.46
SFSWAP-202ENST00000535202 USP19O94966 1318 aa12.14□□□□□ -0.47
SFSWAP-202ENST00000535202 SPATA31A5Q5VU36 1347 aa12.14□□□□□ -0.47
SFSWAP-202ENST00000535202 SPATA31A7Q8IWB4 1347 aa12.14□□□□□ -0.47
SFSWAP-202ENST00000535202 ONECUT3O60422 494 aaPredicted RBP12.14□□□□□ -0.47
SFSWAP-202ENST00000535202 KRT27Q7Z3Y8 459 aa12.14□□□□□ -0.47
SFSWAP-202ENST00000535202 NLRP13Q86W25 1043 aa12.14□□□□□ -0.47
SFSWAP-202ENST00000535202 CCDC125Q86Z20 511 aa12.14□□□□□ -0.47
SFSWAP-202ENST00000535202 BRD4O60885 1362 aaPredicted RBP12.14□□□□□ -0.47
SFSWAP-202ENST00000535202 PIK3C2AO00443 1686 aa12.13□□□□□ -0.47
SFSWAP-202ENST00000535202 THSD7AQ9UPZ6 1657 aa12.13□□□□□ -0.47
SFSWAP-202ENST00000535202 BLMP54132 1417 aaPredicted RBP12.12□□□□□ -0.47
SFSWAP-202ENST00000535202 ZBTB7CA1YPR0 619 aa12.12□□□□□ -0.47
SFSWAP-202ENST00000535202 EVA1CP58658 441 aa12.12□□□□□ -0.47
SFSWAP-202ENST00000535202 NLRP6P59044 892 aa12.12□□□□□ -0.47
SFSWAP-202ENST00000535202 CPDO75976 1380 aa12.12□□□□□ -0.47
SFSWAP-202ENST00000535202 LMO7Q8WWI1 1683 aa12.12□□□□□ -0.47
SFSWAP-202ENST00000535202 SSH2Q76I76 1423 aa12.11□□□□□ -0.47
SFSWAP-202ENST00000535202 CAMTA1Q9Y6Y1 1673 aa12.11□□□□□ -0.47
SFSWAP-202ENST00000535202 GCP02774 474 aa12.11□□□□□ -0.47
SFSWAP-202ENST00000535202 SF3B2Q13435 895 aaKnown RBP12.11□□□□□ -0.47
SFSWAP-202ENST00000535202 SLIT3O75094 1523 aa12.11□□□□□ -0.47
SFSWAP-202ENST00000535202 SPATA31A1Q5TZJ5 1347 aa12.11□□□□□ -0.47
SFSWAP-202ENST00000535202 SBNO2Q9Y2G9 1366 aa12.1□□□□□ -0.47
SFSWAP-202ENST00000535202 USP35Q9P2H5 1018 aa12.1□□□□□ -0.47
SFSWAP-202ENST00000535202 MON2Q7Z3U7 1717 aa12.1□□□□□ -0.47
SFSWAP-202ENST00000535202 EP400Q96L91 3159 aa12.1□□□□□ -0.47
SFSWAP-202ENST00000535202 LARP1Q6PKG0 1096 aaKnown RBP12.09□□□□□ -0.47
SFSWAP-202ENST00000535202 DEFB132Q7Z7B7 95 aa12.09□□□□□ -0.47
SFSWAP-202ENST00000535202 ZNF692Q9BU19 519 aaPredicted RBP12.09□□□□□ -0.47
SFSWAP-202ENST00000535202 TTC21BQ7Z4L5 1316 aa12.09□□□□□ -0.47
SFSWAP-202ENST00000535202 KTN1Q86UP2 1357 aaKnown RBP12.08□□□□□ -0.48
SFSWAP-202ENST00000535202 ZEB1P37275 1124 aaPredicted RBP12.08□□□□□ -0.48
SFSWAP-202ENST00000535202 FAM182BQ5T319 152 aa12.08□□□□□ -0.48
SFSWAP-202ENST00000535202 CPSF1Q10570 1443 aaKnown RBP12.08□□□□□ -0.48
SFSWAP-202ENST00000535202 RGPD1P0DJD0 1748 aa12.08□□□□□ -0.48
SFSWAP-202ENST00000535202 COL5A2P05997 1499 aaPredicted RBP12.08□□□□□ -0.48
SFSWAP-202ENST00000535202 SOX12O15370 315 aa12.07□□□□□ -0.48
SFSWAP-202ENST00000535202 TMC1Q8TDI8 760 aa12.07□□□□□ -0.48
SFSWAP-202ENST00000535202 ZRANB1Q9UGI0 708 aa12.07□□□□□ -0.48
SFSWAP-202ENST00000535202 TTC21AQ8NDW8 1320 aa12.07□□□□□ -0.48
SFSWAP-202ENST00000535202 AATKQ6ZMQ8 1374 aa12.05□□□□□ -0.48
SFSWAP-202ENST00000535202 COL18A1P39060 1754 aa12.05□□□□□ -0.48
SFSWAP-202ENST00000535202 BARGINQ6ZT62 677 aa12.05□□□□□ -0.48
SFSWAP-202ENST00000535202 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.05□□□□□ -0.48
SFSWAP-202ENST00000535202 TCP11L2Q8N4U5 519 aa12.05□□□□□ -0.48
SFSWAP-202ENST00000535202 CD163L1Q9NR16 1453 aa12.05□□□□□ -0.48
SFSWAP-202ENST00000535202 RGPD5Q99666 1765 aa12.05□□□□□ -0.48
SFSWAP-202ENST00000535202 CRB1P82279 1406 aa12.04□□□□□ -0.48
SFSWAP-202ENST00000535202 TNS1Q9HBL0 1735 aaKnown RBP12.04□□□□□ -0.48
SFSWAP-202ENST00000535202 BAG6P46379 1132 aa12.04□□□□□ -0.48
SFSWAP-202ENST00000535202 HDGFL2Q7Z4V5 671 aaPredicted RBP12.04□□□□□ -0.48
SFSWAP-202ENST00000535202 KCNH5Q8NCM2 988 aa12.04□□□□□ -0.48
SFSWAP-202ENST00000535202 NFAT5O94916 1531 aa12.03□□□□□ -0.48
SFSWAP-202ENST00000535202 ST20-MTHFSA0A0A6YYL1 179 aa12.03□□□□□ -0.48
SFSWAP-202ENST00000535202 PDE3BQ13370 1112 aa12.03□□□□□ -0.48
SFSWAP-202ENST00000535202 SLC12A5Q9H2X9 1139 aa12.03□□□□□ -0.48
SFSWAP-202ENST00000535202 THRAP3Q9Y2W1 955 aaKnown RBP12.03□□□□□ -0.48
SFSWAP-202ENST00000535202 USP54Q70EL1 1684 aa12.03□□□□□ -0.48
SFSWAP-202ENST00000535202 PARP4Q9UKK3 1724 aaKnown RBP12.03□□□□□ -0.48
SFSWAP-202ENST00000535202 WNK3Q9BYP7 1800 aa12.02□□□□□ -0.48
SFSWAP-202ENST00000535202 TOM1L2Q6ZVM7 507 aa12.02□□□□□ -0.49
SFSWAP-202ENST00000535202 ARHGEF25Q86VW2 580 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms