RNA–Protein interactions for RNA: ENST00000534692.1

CKLF-207, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-207ENST00000534692 CPSF1Q10570 1443 aaKnown RBP32.17■■■□□ 2.74
CKLF-207ENST00000534692 MON2Q7Z3U7 1717 aa32.17■■■□□ 2.74
CKLF-207ENST00000534692 SSH2Q76I76 1423 aa32.16■■■□□ 2.74
CKLF-207ENST00000534692 NRKQ7Z2Y5 1582 aa32.15■■■□□ 2.74
CKLF-207ENST00000534692 TMF1P82094 1093 aa32.14■■■□□ 2.74
CKLF-207ENST00000534692 CABLES1Q8TDN4 633 aa32.13■■■□□ 2.73
CKLF-207ENST00000534692 C8orf37Q96NL8 207 aa32.13■■■□□ 2.73
CKLF-207ENST00000534692 ZNF692Q9BU19 519 aaPredicted RBP32.13■■■□□ 2.73
CKLF-207ENST00000534692 CD163L1Q9NR16 1453 aa32.13■■■□□ 2.73
CKLF-207ENST00000534692 AFF2P51816 1311 aa32.12■■■□□ 2.73
CKLF-207ENST00000534692 PHRF1Q9P1Y6 1649 aaKnown RBP32.11■■■□□ 2.73
CKLF-207ENST00000534692 NINLQ9Y2I6 1382 aa32.11■■■□□ 2.73
CKLF-207ENST00000534692 ZNF772Q68DY9 489 aaPredicted RBP32.11■■■□□ 2.73
CKLF-207ENST00000534692 ILDR2Q71H61 639 aa32.11■■■□□ 2.73
CKLF-207ENST00000534692 EIF4G2P78344 907 aaKnown RBP eCLIP32.1■■■□□ 2.73
CKLF-207ENST00000534692 POTEAQ6S8J7 498 aa32.09■■■□□ 2.73
CKLF-207ENST00000534692 NGLY1Q96IV0 654 aa32.09■■■□□ 2.73
CKLF-207ENST00000534692 PIK3C2AO00443 1686 aa32.08■■■□□ 2.73
CKLF-207ENST00000534692 HAP1P54257 671 aaPredicted RBP32.07■■■□□ 2.72
CKLF-207ENST00000534692 TMC1Q8TDI8 760 aa32.07■■■□□ 2.72
CKLF-207ENST00000534692 SLC12A5Q9H2X9 1139 aa32.07■■■□□ 2.72
CKLF-207ENST00000534692 KTN1Q86UP2 1357 aaKnown RBP32.07■■■□□ 2.72
CKLF-207ENST00000534692 CDCA8Q53HL2 280 aa32.06■■■□□ 2.72
CKLF-207ENST00000534692 FNBP4Q8N3X1 1017 aaPredicted RBP32.06■■■□□ 2.72
CKLF-207ENST00000534692 ABTB2Q8N961 1025 aa32.06■■■□□ 2.72
CKLF-207ENST00000534692 HSPA5P11021 654 aaKnown RBP32.05■■■□□ 2.72
CKLF-207ENST00000534692 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.04■■■□□ 2.72
CKLF-207ENST00000534692 PLEKHG5O94827 1062 aa32.04■■■□□ 2.72
CKLF-207ENST00000534692 USP19O94966 1318 aa32.03■■■□□ 2.72
CKLF-207ENST00000534692 PLCH1Q4KWH8 1693 aa32.03■■■□□ 2.72
CKLF-207ENST00000534692 NWD2Q9ULI1 1742 aa32.03■■■□□ 2.72
CKLF-207ENST00000534692 TTC21BQ7Z4L5 1316 aa32.02■■■□□ 2.72
CKLF-207ENST00000534692 SLIT2O94813 1529 aa32.02■■■□□ 2.72
CKLF-207ENST00000534692 NUTM2GQ5VZR2 741 aa32.02■■■□□ 2.72
CKLF-207ENST00000534692 TERF2IPQ9NYB0 399 aa32.02■■■□□ 2.72
CKLF-207ENST00000534692 A0A1W2PP64 1363 aa32.02■■■□□ 2.72
CKLF-207ENST00000534692 MYOM1P52179 1685 aa32.02■■■□□ 2.72
CKLF-207ENST00000534692 TTC21AQ8NDW8 1320 aa32.01■■■□□ 2.72
CKLF-207ENST00000534692 HDGFL2Q7Z4V5 671 aaPredicted RBP32.01■■■□□ 2.71
CKLF-207ENST00000534692 COL14A1Q05707 1796 aaKnown RBP31.99■■■□□ 2.71
CKLF-207ENST00000534692 BCL9LQ86UU0 1499 aa31.99■■■□□ 2.71
CKLF-207ENST00000534692 NLRP13Q86W25 1043 aa31.99■■■□□ 2.71
CKLF-207ENST00000534692 EDC4Q6P2E9 1401 aaKnown RBP31.99■■■□□ 2.71
CKLF-207ENST00000534692 USP54Q70EL1 1684 aa31.99■■■□□ 2.71
CKLF-207ENST00000534692 USP21Q9UK80 565 aa31.98■■■□□ 2.71
CKLF-207ENST00000534692 SLIT3O75094 1523 aa31.97■■■□□ 2.71
CKLF-207ENST00000534692 ANKRD36BQ8N2N9 1353 aa31.95■■■□□ 2.71
CKLF-207ENST00000534692 NLRP6P59044 892 aa31.94■■■□□ 2.7
CKLF-207ENST00000534692 ATRNO75882 1429 aa31.93■■■□□ 2.7
CKLF-207ENST00000534692 NRAPQ86VF7 1730 aa31.93■■■□□ 2.7
CKLF-207ENST00000534692 FAM83GA6ND36 823 aa31.93■■■□□ 2.7
CKLF-207ENST00000534692 QTRT2Q9H974 415 aaKnown RBP31.92■■■□□ 2.7
CKLF-207ENST00000534692 KIAA0232Q92628 1395 aa31.91■■■□□ 2.7
CKLF-207ENST00000534692 TRPC5Q9UL62 973 aaPredicted RBP31.9■■■□□ 2.7
CKLF-207ENST00000534692 CPDO75976 1380 aa31.9■■■□□ 2.7
CKLF-207ENST00000534692 USP31Q70CQ4 1352 aa31.9■■■□□ 2.7
CKLF-207ENST00000534692 GCP02774 474 aa31.89■■■□□ 2.7
CKLF-207ENST00000534692 UNC5CLQ8IV45 518 aa31.89■■■□□ 2.7
CKLF-207ENST00000534692 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.88■■■□□ 2.69
CKLF-207ENST00000534692 PRDM11Q9NQV5 511 aa31.88■■■□□ 2.69
CKLF-207ENST00000534692 CDK12Q9NYV4 1490 aaPredicted RBP31.87■■■□□ 2.69
CKLF-207ENST00000534692 RXRBP28702 533 aa31.87■■■□□ 2.69
CKLF-207ENST00000534692 ZC3H6P61129 1189 aaKnown RBP31.85■■■□□ 2.69
CKLF-207ENST00000534692 RBM6P78332 1123 aaKnown RBP31.85■■■□□ 2.69
CKLF-207ENST00000534692 LMO7Q8WWI1 1683 aa31.85■■■□□ 2.69
CKLF-207ENST00000534692 NME9Q86XW9 330 aa31.84■■■□□ 2.69
CKLF-207ENST00000534692 NFAT5O94916 1531 aa31.83■■■□□ 2.69
CKLF-207ENST00000534692 BTG4Q9NY30 223 aa31.82■■■□□ 2.68
CKLF-207ENST00000534692 OVOS2A0A0J9YW53 1432 aa31.82■■■□□ 2.68
CKLF-207ENST00000534692 OVOS2Q6IE36 1432 aa31.82■■■□□ 2.68
CKLF-207ENST00000534692 ZRANB1Q9UGI0 708 aa31.81■■■□□ 2.68
CKLF-207ENST00000534692 KIF20BQ96Q89 1820 aa31.8■■■□□ 2.68
CKLF-207ENST00000534692 CHRNA2Q15822 529 aa31.8■■■□□ 2.68
CKLF-207ENST00000534692 KCNH5Q8NCM2 988 aa31.8■■■□□ 2.68
CKLF-207ENST00000534692 GLI3P10071 1580 aa31.8■■■□□ 2.68
CKLF-207ENST00000534692 COL18A1P39060 1754 aa31.79■■■□□ 2.68
CKLF-207ENST00000534692 C11orf95C9JLR9 678 aaPredicted RBP31.79■■■□□ 2.68
CKLF-207ENST00000534692 VPS72Q15906 364 aa31.79■■■□□ 2.68
CKLF-207ENST00000534692 CAMTA1Q9Y6Y1 1673 aa31.77■■■□□ 2.68
CKLF-207ENST00000534692 GJD4Q96KN9 370 aaPredicted RBP31.77■■■□□ 2.68
CKLF-207ENST00000534692 RGS12O14924 1447 aa31.75■■■□□ 2.67
CKLF-207ENST00000534692 POLR3GLQ9BT43 218 aa31.75■■■□□ 2.67
CKLF-207ENST00000534692 LTN1O94822 1766 aa31.74■■■□□ 2.67
CKLF-207ENST00000534692 AATKQ6ZMQ8 1374 aa31.74■■■□□ 2.67
CKLF-207ENST00000534692 SOCS7O14512 581 aa31.74■■■□□ 2.67
CKLF-207ENST00000534692 CARD14Q9BXL6 1004 aa31.74■■■□□ 2.67
CKLF-207ENST00000534692 ARHGEF25Q86VW2 580 aa31.73■■■□□ 2.67
CKLF-207ENST00000534692 ABCC6O95255 1503 aa31.73■■■□□ 2.67
CKLF-207ENST00000534692 NSD3Q9BZ95 1437 aa31.73■■■□□ 2.67
CKLF-207ENST00000534692 RGPD5Q99666 1765 aa31.71■■■□□ 2.67
CKLF-207ENST00000534692 KIF7Q2M1P5 1343 aa31.7■■■□□ 2.66
CKLF-207ENST00000534692 FYB1O15117 783 aa31.69■■■□□ 2.66
CKLF-207ENST00000534692 COL5A2P05997 1499 aaPredicted RBP31.68■■■□□ 2.66
CKLF-207ENST00000534692 SOX12O15370 315 aa31.68■■■□□ 2.66
CKLF-207ENST00000534692 COG3Q96JB2 828 aa31.68■■■□□ 2.66
CKLF-207ENST00000534692 CCDC9Q9Y3X0 531 aaKnown RBP31.66■■■□□ 2.66
CKLF-207ENST00000534692 SPATA31A5Q5VU36 1347 aa31.66■■■□□ 2.66
CKLF-207ENST00000534692 SPATA31A7Q8IWB4 1347 aa31.66■■■□□ 2.66
CKLF-207ENST00000534692 ZBTB7CA1YPR0 619 aa31.64■■■□□ 2.66
CKLF-207ENST00000534692 STRN4Q9NRL3 753 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms