RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 COL3A1P02461 1466 aaPredicted RBP17.62■□□□□ 0.41
BEST1-208ENST00000534553 E9PSI1 815 aa17.61■□□□□ 0.41
BEST1-208ENST00000534553 RRP1P56182 461 aaKnown RBP17.61■□□□□ 0.41
BEST1-208ENST00000534553 IRX6P78412 446 aaPredicted RBP17.61■□□□□ 0.41
BEST1-208ENST00000534553 IQSEC2Q5JU85 1478 aa17.61■□□□□ 0.41
BEST1-208ENST00000534553 CCDC27Q2M243 656 aa17.61■□□□□ 0.41
BEST1-208ENST00000534553 PRR36Q9H6K5 1346 aa17.6■□□□□ 0.41
BEST1-208ENST00000534553 ANKARQ7Z5J8 1434 aa17.6■□□□□ 0.41
BEST1-208ENST00000534553 SLFN5Q08AF3 891 aa17.59■□□□□ 0.41
BEST1-208ENST00000534553 DUSP27Q5VZP5 1158 aa17.59■□□□□ 0.41
BEST1-208ENST00000534553 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.58■□□□□ 0.41
BEST1-208ENST00000534553 TRMT2AQ8IZ69 625 aaKnown RBP17.58■□□□□ 0.41
BEST1-208ENST00000534553 COG3Q96JB2 828 aa17.58■□□□□ 0.4
BEST1-208ENST00000534553 U2AF1L5P0DN76 240 aaPredicted RBP17.57■□□□□ 0.4
BEST1-208ENST00000534553 U2AF1Q01081 240 aaKnown RBP eCLIP17.57■□□□□ 0.4
BEST1-208ENST00000534553 NRKQ7Z2Y5 1582 aa17.57■□□□□ 0.4
BEST1-208ENST00000534553 DIAPH1O60610 1272 aaKnown RBP17.56■□□□□ 0.4
BEST1-208ENST00000534553 PHF23Q9BUL5 403 aaPredicted RBP17.56■□□□□ 0.4
BEST1-208ENST00000534553 NKTRP30414 1462 aaKnown RBP17.56■□□□□ 0.4
BEST1-208ENST00000534553 WDR63Q8IWG1 891 aa17.56■□□□□ 0.4
BEST1-208ENST00000534553 CDK12Q9NYV4 1490 aaPredicted RBP17.56■□□□□ 0.4
BEST1-208ENST00000534553 USP6P35125 1406 aa17.55■□□□□ 0.4
BEST1-208ENST00000534553 WWC1Q8IX03 1113 aa17.55■□□□□ 0.4
BEST1-208ENST00000534553 TCP11L2Q8N4U5 519 aa17.55■□□□□ 0.4
BEST1-208ENST00000534553 ACEP12821 1306 aa17.54■□□□□ 0.4
BEST1-208ENST00000534553 TTC21AQ8NDW8 1320 aa17.54■□□□□ 0.4
BEST1-208ENST00000534553 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.54■□□□□ 0.4
BEST1-208ENST00000534553 POLKQ9UBT6 870 aa17.54■□□□□ 0.4
BEST1-208ENST00000534553 CHD2O14647 1828 aaKnown RBP17.53■□□□□ 0.4
BEST1-208ENST00000534553 TTC21BQ7Z4L5 1316 aa17.53■□□□□ 0.4
BEST1-208ENST00000534553 KCNA6P17658 529 aa17.52■□□□□ 0.4
BEST1-208ENST00000534553 NME9Q86XW9 330 aa17.52■□□□□ 0.4
BEST1-208ENST00000534553 MAPK8IP3Q9UPT6 1336 aa17.52■□□□□ 0.4
BEST1-208ENST00000534553 NPHP4O75161 1426 aaPredicted RBP17.52■□□□□ 0.39
BEST1-208ENST00000534553 U2SURPO15042 1029 aaKnown RBP17.51■□□□□ 0.39
BEST1-208ENST00000534553 OVOS2A0A0J9YW53 1432 aa17.51■□□□□ 0.39
BEST1-208ENST00000534553 OVOS2Q6IE36 1432 aa17.51■□□□□ 0.39
BEST1-208ENST00000534553 SSH2Q76I76 1423 aa17.51■□□□□ 0.39
BEST1-208ENST00000534553 FCHSD2O94868 740 aa17.51■□□□□ 0.39
BEST1-208ENST00000534553 NCKAP5LQ9HCH0 1330 aa17.51■□□□□ 0.39
BEST1-208ENST00000534553 NEFMP07197 916 aa17.5■□□□□ 0.39
BEST1-208ENST00000534553 FMN2Q9NZ56 1722 aa17.49■□□□□ 0.39
BEST1-208ENST00000534553 PLEKHF1Q96S99 279 aa17.49■□□□□ 0.39
BEST1-208ENST00000534553 MYH16Q9H6N6 1097 aa17.48■□□□□ 0.39
BEST1-208ENST00000534553 MAP2P11137 1827 aaKnown RBP17.47■□□□□ 0.39
BEST1-208ENST00000534553 USP31Q70CQ4 1352 aa17.47■□□□□ 0.39
BEST1-208ENST00000534553 CCDC136Q96JN2 1154 aa17.47■□□□□ 0.39
BEST1-208ENST00000534553 LRRC7Q96NW7 1537 aa17.46■□□□□ 0.39
BEST1-208ENST00000534553 NALCNQ8IZF0 1738 aa17.46■□□□□ 0.39
BEST1-208ENST00000534553 NGDNQ8NEJ9 315 aaKnown RBP17.46■□□□□ 0.39
BEST1-208ENST00000534553 NWD1Q149M9 1564 aa17.45■□□□□ 0.38
BEST1-208ENST00000534553 ADGRL3Q9HAR2 1447 aa17.45■□□□□ 0.38
BEST1-208ENST00000534553 IL16Q14005 1332 aa17.45■□□□□ 0.38
BEST1-208ENST00000534553 CT47B1P0C2W7 299 aaPredicted RBP17.44■□□□□ 0.38
BEST1-208ENST00000534553 TMPOP42166 694 aaKnown RBP17.44■□□□□ 0.38
BEST1-208ENST00000534553 B4GALNT3Q6L9W6 998 aa17.44■□□□□ 0.38
BEST1-208ENST00000534553 PPM1GO15355 546 aaPredicted RBP17.44■□□□□ 0.38
BEST1-208ENST00000534553 NEUROD2Q15784 382 aa17.44■□□□□ 0.38
BEST1-208ENST00000534553 SPINK5Q9NQ38 1064 aaPredicted RBP17.44■□□□□ 0.38
BEST1-208ENST00000534553 EMILIN1Q9Y6C2 1016 aa17.44■□□□□ 0.38
BEST1-208ENST00000534553 NUTM2FA1L443 756 aa17.43■□□□□ 0.38
BEST1-208ENST00000534553 IL13P35225 146 aa17.43■□□□□ 0.38
BEST1-208ENST00000534553 RSPH6AQ9H0K4 717 aa17.42■□□□□ 0.38
BEST1-208ENST00000534553 RRP7AQ9Y3A4 280 aaKnown RBP17.42■□□□□ 0.38
BEST1-208ENST00000534553 ZRANB1Q9UGI0 708 aa17.41■□□□□ 0.38
BEST1-208ENST00000534553 KIF24Q5T7B8 1368 aa17.41■□□□□ 0.38
BEST1-208ENST00000534553 USP54Q70EL1 1684 aa17.41■□□□□ 0.38
BEST1-208ENST00000534553 PMFBP1Q8TBY8 1022 aa17.4■□□□□ 0.38
BEST1-208ENST00000534553 CALD1Q05682 793 aaKnown RBP17.4■□□□□ 0.38
BEST1-208ENST00000534553 EXOC6Q8TAG9 804 aa17.4■□□□□ 0.38
BEST1-208ENST00000534553 DMRT2Q9Y5R5 561 aa17.4■□□□□ 0.38
BEST1-208ENST00000534553 TSHZ2Q9NRE2 1034 aa17.39■□□□□ 0.37
BEST1-208ENST00000534553 PRKAR2BP31323 418 aa17.38■□□□□ 0.37
BEST1-208ENST00000534553 RRS1Q15050 365 aaKnown RBP17.38■□□□□ 0.37
BEST1-208ENST00000534553 RGPD8O14715 1765 aaPredicted RBP17.38■□□□□ 0.37
BEST1-208ENST00000534553 RIPK4P57078 832 aa17.37■□□□□ 0.37
BEST1-208ENST00000534553 LMOD3Q0VAK6 560 aa17.37■□□□□ 0.37
BEST1-208ENST00000534553 TRIM35Q9UPQ4 493 aa17.37■□□□□ 0.37
BEST1-208ENST00000534553 SBNO1A3KN83 1393 aa17.36■□□□□ 0.37
BEST1-208ENST00000534553 PDE3AQ14432 1141 aa17.36■□□□□ 0.37
BEST1-208ENST00000534553 NFE2L2Q16236 605 aa17.36■□□□□ 0.37
BEST1-208ENST00000534553 PHF8Q9UPP1 1060 aa17.36■□□□□ 0.37
BEST1-208ENST00000534553 PIK3C2AO00443 1686 aa17.36■□□□□ 0.37
BEST1-208ENST00000534553 FLT4P35916 1363 aa17.36■□□□□ 0.37
BEST1-208ENST00000534553 PLIN1O60240 522 aa17.35■□□□□ 0.37
BEST1-208ENST00000534553 FBLN1P23142 703 aa17.35■□□□□ 0.37
BEST1-208ENST00000534553 CRBNQ96SW2 442 aa17.34■□□□□ 0.37
BEST1-208ENST00000534553 NCOA3Q9Y6Q9 1424 aa17.34■□□□□ 0.37
BEST1-208ENST00000534553 AAMPQ13685 434 aa17.33■□□□□ 0.37
BEST1-208ENST00000534553 RARSP54136 660 aaKnown RBP17.33■□□□□ 0.36
BEST1-208ENST00000534553 EIF4A2Q14240 407 aaKnown RBP17.33■□□□□ 0.36
BEST1-208ENST00000534553 FANCIQ9NVI1 1328 aa17.32■□□□□ 0.36
BEST1-208ENST00000534553 ARHGEF10O15013 1369 aa17.32■□□□□ 0.36
BEST1-208ENST00000534553 ZNF428Q96B54 188 aa17.32■□□□□ 0.36
BEST1-208ENST00000534553 HMOX1P09601 288 aa17.31■□□□□ 0.36
BEST1-208ENST00000534553 NLRP6P59044 892 aa17.31■□□□□ 0.36
BEST1-208ENST00000534553 C14orf37Q86TY3 774 aa17.31■□□□□ 0.36
BEST1-208ENST00000534553 MAP3K19Q56UN5 1328 aa17.31■□□□□ 0.36
BEST1-208ENST00000534553 RGPD1P0DJD0 1748 aa17.3■□□□□ 0.36
BEST1-208ENST00000534553 PEAK1Q9H792 1746 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms