RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 TRPM1Q7Z4N2 1603 aa33.31■■■□□ 2.92
YIF1A-213ENST00000534374 CABP2Q9NPB3 220 aa33.29■■■□□ 2.92
YIF1A-213ENST00000534374 VPS72Q15906 364 aa33.28■■■□□ 2.92
YIF1A-213ENST00000534374 ATAD2Q6PL18 1390 aa33.28■■■□□ 2.92
YIF1A-213ENST00000534374 ABCA3Q99758 1704 aa33.28■■■□□ 2.92
YIF1A-213ENST00000534374 TOPAZ1Q8N9V7 1692 aa33.26■■■□□ 2.92
YIF1A-213ENST00000534374 EVC2Q86UK5 1308 aa33.25■■■□□ 2.91
YIF1A-213ENST00000534374 NWD2Q9ULI1 1742 aa33.24■■■□□ 2.91
YIF1A-213ENST00000534374 RALGAPBQ86X10 1494 aa33.24■■■□□ 2.91
YIF1A-213ENST00000534374 QRICH2Q9H0J4 1663 aa33.23■■■□□ 2.91
YIF1A-213ENST00000534374 PPIP5K1Q6PFW1 1433 aa33.22■■■□□ 2.91
YIF1A-213ENST00000534374 TONSLQ96HA7 1378 aa33.21■■■□□ 2.91
YIF1A-213ENST00000534374 ONECUT3O60422 494 aaPredicted RBP33.2■■■□□ 2.91
YIF1A-213ENST00000534374 BTG4Q9NY30 223 aa33.2■■■□□ 2.91
YIF1A-213ENST00000534374 CABP1Q9NZU7 370 aa33.2■■■□□ 2.91
YIF1A-213ENST00000534374 BRD4O60885 1362 aaPredicted RBP33.2■■■□□ 2.9
YIF1A-213ENST00000534374 PLCH1Q4KWH8 1693 aa33.18■■■□□ 2.9
YIF1A-213ENST00000534374 ABTB2Q8N961 1025 aa33.18■■■□□ 2.9
YIF1A-213ENST00000534374 GLI3P10071 1580 aa33.17■■■□□ 2.9
YIF1A-213ENST00000534374 PRDM11Q9NQV5 511 aa33.16■■■□□ 2.9
YIF1A-213ENST00000534374 CCDC9Q9Y3X0 531 aaKnown RBP33.16■■■□□ 2.9
YIF1A-213ENST00000534374 CARD11Q9BXL7 1154 aa33.15■■■□□ 2.9
YIF1A-213ENST00000534374 CRYBG1Q9Y4K1 1723 aa33.15■■■□□ 2.9
YIF1A-213ENST00000534374 COL14A1Q05707 1796 aaKnown RBP33.14■■■□□ 2.9
YIF1A-213ENST00000534374 NUTM2GQ5VZR2 741 aa33.14■■■□□ 2.9
YIF1A-213ENST00000534374 NLRP13Q86W25 1043 aa33.12■■■□□ 2.89
YIF1A-213ENST00000534374 SEPT12Q8IYM1 358 aa33.12■■■□□ 2.89
YIF1A-213ENST00000534374 CCDC125Q86Z20 511 aa33.11■■■□□ 2.89
YIF1A-213ENST00000534374 ZNF692Q9BU19 519 aaPredicted RBP33.1■■■□□ 2.89
YIF1A-213ENST00000534374 KIAA0232Q92628 1395 aa33.09■■■□□ 2.89
YIF1A-213ENST00000534374 EP400Q96L91 3159 aa33.09■■■□□ 2.89
YIF1A-213ENST00000534374 SBNO2Q9Y2G9 1366 aa33.09■■■□□ 2.89
YIF1A-213ENST00000534374 ZC3H6P61129 1189 aaKnown RBP33.08■■■□□ 2.89
YIF1A-213ENST00000534374 USP19O94966 1318 aa33.07■■■□□ 2.88
YIF1A-213ENST00000534374 USP6P35125 1406 aa33.07■■■□□ 2.88
YIF1A-213ENST00000534374 NRAPQ86VF7 1730 aa33.06■■■□□ 2.88
YIF1A-213ENST00000534374 SPATA31A5Q5VU36 1347 aa33.04■■■□□ 2.88
YIF1A-213ENST00000534374 SPATA31A7Q8IWB4 1347 aa33.04■■■□□ 2.88
YIF1A-213ENST00000534374 GCP02774 474 aa33.04■■■□□ 2.88
YIF1A-213ENST00000534374 CHRNA2Q15822 529 aa33.04■■■□□ 2.88
YIF1A-213ENST00000534374 PHRF1Q9P1Y6 1649 aaKnown RBP33.03■■■□□ 2.88
YIF1A-213ENST00000534374 SSH2Q76I76 1423 aa33.02■■■□□ 2.88
YIF1A-213ENST00000534374 CPDO75976 1380 aa33.02■■■□□ 2.88
YIF1A-213ENST00000534374 NLRP6P59044 892 aa33.01■■■□□ 2.87
YIF1A-213ENST00000534374 FAM98CQ17RN3 349 aaKnown RBP33.01■■■□□ 2.87
YIF1A-213ENST00000534374 KRT27Q7Z3Y8 459 aa33■■■□□ 2.87
YIF1A-213ENST00000534374 BRWD3Q6RI45 1802 aa32.99■■■□□ 2.87
YIF1A-213ENST00000534374 EVA1CP58658 441 aa32.96■■■□□ 2.87
YIF1A-213ENST00000534374 PUS7Q96PZ0 661 aaKnown RBP32.96■■■□□ 2.87
YIF1A-213ENST00000534374 CPSF1Q10570 1443 aaKnown RBP32.95■■■□□ 2.87
YIF1A-213ENST00000534374 STRN4Q9NRL3 753 aa32.95■■■□□ 2.87
YIF1A-213ENST00000534374 SPATA31A1Q5TZJ5 1347 aa32.95■■■□□ 2.86
YIF1A-213ENST00000534374 TTC21BQ7Z4L5 1316 aa32.95■■■□□ 2.86
YIF1A-213ENST00000534374 A0A0G2JS52 829 aa32.94■■■□□ 2.86
YIF1A-213ENST00000534374 SLC24A1O60721 1099 aa32.94■■■□□ 2.86
YIF1A-213ENST00000534374 MYT1Q01538 1121 aa32.94■■■□□ 2.86
YIF1A-213ENST00000534374 NRKQ7Z2Y5 1582 aa32.94■■■□□ 2.86
YIF1A-213ENST00000534374 TTC21AQ8NDW8 1320 aa32.93■■■□□ 2.86
YIF1A-213ENST00000534374 ZRANB1Q9UGI0 708 aa32.92■■■□□ 2.86
YIF1A-213ENST00000534374 BLMP54132 1417 aaPredicted RBP32.91■■■□□ 2.86
YIF1A-213ENST00000534374 CAMTA1Q9Y6Y1 1673 aa32.89■■■□□ 2.86
YIF1A-213ENST00000534374 KTN1Q86UP2 1357 aaKnown RBP32.89■■■□□ 2.86
YIF1A-213ENST00000534374 TIMELESSQ9UNS1 1208 aa32.89■■■□□ 2.86
YIF1A-213ENST00000534374 AKAP12Q02952 1782 aa32.88■■■□□ 2.85
YIF1A-213ENST00000534374 CLSPNQ9HAW4 1339 aa32.87■■■□□ 2.85
YIF1A-213ENST00000534374 ST20-MTHFSA0A0A6YYL1 179 aa32.87■■■□□ 2.85
YIF1A-213ENST00000534374 KCNH5Q8NCM2 988 aa32.87■■■□□ 2.85
YIF1A-213ENST00000534374 SLIT3O75094 1523 aa32.87■■■□□ 2.85
YIF1A-213ENST00000534374 BARGINQ6ZT62 677 aa32.86■■■□□ 2.85
YIF1A-213ENST00000534374 TESK2Q96S53 571 aa32.86■■■□□ 2.85
YIF1A-213ENST00000534374 AATKQ6ZMQ8 1374 aa32.85■■■□□ 2.85
YIF1A-213ENST00000534374 SF3B2Q13435 895 aaKnown RBP32.85■■■□□ 2.85
YIF1A-213ENST00000534374 LARP1Q6PKG0 1096 aaKnown RBP32.85■■■□□ 2.85
YIF1A-213ENST00000534374 TMC1Q8TDI8 760 aa32.85■■■□□ 2.85
YIF1A-213ENST00000534374 LMO7Q8WWI1 1683 aa32.85■■■□□ 2.85
YIF1A-213ENST00000534374 SLC12A5Q9H2X9 1139 aa32.84■■■□□ 2.85
YIF1A-213ENST00000534374 PIK3C2AO00443 1686 aa32.84■■■□□ 2.85
YIF1A-213ENST00000534374 HDGFL2Q7Z4V5 671 aaPredicted RBP32.82■■■□□ 2.84
YIF1A-213ENST00000534374 USP35Q9P2H5 1018 aa32.82■■■□□ 2.84
YIF1A-213ENST00000534374 THRAP3Q9Y2W1 955 aaKnown RBP32.82■■■□□ 2.84
YIF1A-213ENST00000534374 TCP11L2Q8N4U5 519 aa32.81■■■□□ 2.84
YIF1A-213ENST00000534374 PCGF6Q9BYE7 350 aa32.81■■■□□ 2.84
YIF1A-213ENST00000534374 THSD7AQ9UPZ6 1657 aa32.81■■■□□ 2.84
YIF1A-213ENST00000534374 ARHGEF25Q86VW2 580 aa32.8■■■□□ 2.84
YIF1A-213ENST00000534374 TERF2IPQ9NYB0 399 aa32.8■■■□□ 2.84
YIF1A-213ENST00000534374 CD163L1Q9NR16 1453 aa32.79■■■□□ 2.84
YIF1A-213ENST00000534374 SRCAPQ6ZRS2 3230 aa32.78■■■□□ 2.84
YIF1A-213ENST00000534374 ZBTB7CA1YPR0 619 aa32.77■■■□□ 2.84
YIF1A-213ENST00000534374 COL5A2P05997 1499 aaPredicted RBP32.77■■■□□ 2.84
YIF1A-213ENST00000534374 USP31Q70CQ4 1352 aa32.76■■■□□ 2.83
YIF1A-213ENST00000534374 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.76■■■□□ 2.83
YIF1A-213ENST00000534374 MON2Q7Z3U7 1717 aa32.76■■■□□ 2.83
YIF1A-213ENST00000534374 DEFB132Q7Z7B7 95 aa32.75■■■□□ 2.83
YIF1A-213ENST00000534374 NINLQ9Y2I6 1382 aa32.74■■■□□ 2.83
YIF1A-213ENST00000534374 AXIN2Q9Y2T1 843 aa32.74■■■□□ 2.83
YIF1A-213ENST00000534374 CRB1P82279 1406 aa32.72■■■□□ 2.83
YIF1A-213ENST00000534374 FAM182BQ5T319 152 aa32.72■■■□□ 2.83
YIF1A-213ENST00000534374 FAM196AQ6ZSG2 479 aa32.72■■■□□ 2.83
YIF1A-213ENST00000534374 COL18A1P39060 1754 aa32.71■■■□□ 2.83
YIF1A-213ENST00000534374 PDE3BQ13370 1112 aa32.71■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms