RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 TMPOP42166 694 aaKnown RBP21.28■■□□□ 1
PHRF1-205ENST00000533464 CNTROBQ8N137 903 aa21.28■■□□□ 1
PHRF1-205ENST00000533464 NINLQ9Y2I6 1382 aa21.28■■□□□ 1
PHRF1-205ENST00000533464 VPS37DQ86XT2 251 aa21.28■■□□□ 1
PHRF1-205ENST00000533464 TRIM29Q14134 588 aa21.28■■□□□ 1
PHRF1-205ENST00000533464 NEK4P51957 841 aa21.26■□□□□ 0.99
PHRF1-205ENST00000533464 FSD1Q9BTV5 496 aa21.26■□□□□ 0.99
PHRF1-205ENST00000533464 RPRD2Q5VT52 1461 aaKnown RBP21.26■□□□□ 0.99
PHRF1-205ENST00000533464 ADGRF5Q8IZF2 1346 aa21.26■□□□□ 0.99
PHRF1-205ENST00000533464 NUDT16Q96DE0 195 aaKnown RBP21.26■□□□□ 0.99
PHRF1-205ENST00000533464 WAPLQ7Z5K2 1190 aa21.25■□□□□ 0.99
PHRF1-205ENST00000533464 WASHC4Q2M389 1173 aa21.25■□□□□ 0.99
PHRF1-205ENST00000533464 ZNF608Q9ULD9 1512 aaPredicted RBP21.25■□□□□ 0.99
PHRF1-205ENST00000533464 CCT4P50991 539 aaKnown RBP21.24■□□□□ 0.99
PHRF1-205ENST00000533464 PES1O00541 588 aaKnown RBP21.24■□□□□ 0.99
PHRF1-205ENST00000533464 ZNF530Q6P9A1 599 aaPredicted RBP21.24■□□□□ 0.99
PHRF1-205ENST00000533464 CD109Q6YHK3 1445 aa21.24■□□□□ 0.99
PHRF1-205ENST00000533464 NFE2L2Q16236 605 aa21.23■□□□□ 0.99
PHRF1-205ENST00000533464 TPD52L1Q16890 204 aaPredicted RBP21.23■□□□□ 0.99
PHRF1-205ENST00000533464 MSH5O43196 834 aa21.23■□□□□ 0.99
PHRF1-205ENST00000533464 NFXL1Q6ZNB6 911 aa21.23■□□□□ 0.99
PHRF1-205ENST00000533464 KIF14Q15058 1648 aa21.23■□□□□ 0.99
PHRF1-205ENST00000533464 BIVM-ERCC5R4GMW8 1640 aa21.22■□□□□ 0.99
PHRF1-205ENST00000533464 FOSBP53539 338 aa21.22■□□□□ 0.99
PHRF1-205ENST00000533464 VPS53Q5VIR6 699 aa21.22■□□□□ 0.99
PHRF1-205ENST00000533464 NOL10Q9BSC4 688 aaKnown RBP21.22■□□□□ 0.99
PHRF1-205ENST00000533464 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.22■□□□□ 0.99
PHRF1-205ENST00000533464 RABEP1Q15276 862 aa21.22■□□□□ 0.99
PHRF1-205ENST00000533464 RALYLQ86SE5 291 aaKnown RBP21.22■□□□□ 0.99
PHRF1-205ENST00000533464 THUMPD2Q9BTF0 503 aaKnown RBP21.22■□□□□ 0.99
PHRF1-205ENST00000533464 TATP17735 454 aaPredicted RBP21.21■□□□□ 0.99
PHRF1-205ENST00000533464 CHD1LQ86WJ1 897 aa21.21■□□□□ 0.99
PHRF1-205ENST00000533464 ZNF428Q96B54 188 aa21.21■□□□□ 0.99
PHRF1-205ENST00000533464 SRCIN1Q9C0H9 1055 aa21.21■□□□□ 0.99
PHRF1-205ENST00000533464 ADGRL1O94910 1474 aa21.2■□□□□ 0.98
PHRF1-205ENST00000533464 TRAK2O60296 914 aa21.2■□□□□ 0.98
PHRF1-205ENST00000533464 AMOTL1Q8IY63 956 aa21.2■□□□□ 0.98
PHRF1-205ENST00000533464 C20orf194Q5TEA3 1177 aa21.2■□□□□ 0.98
PHRF1-205ENST00000533464 TPM3P06753 285 aa21.19■□□□□ 0.98
PHRF1-205ENST00000533464 PSMA5P28066 241 aa21.19■□□□□ 0.98
PHRF1-205ENST00000533464 TMEM57Q8N5G2 664 aa21.19■□□□□ 0.98
PHRF1-205ENST00000533464 IDI1Q13907 227 aa21.19■□□□□ 0.98
PHRF1-205ENST00000533464 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.19■□□□□ 0.98
PHRF1-205ENST00000533464 ANKLE2Q86XL3 938 aa21.18■□□□□ 0.98
PHRF1-205ENST00000533464 LRRCC1Q9C099 1032 aa21.18■□□□□ 0.98
PHRF1-205ENST00000533464 DNAJC2Q99543 621 aaKnown RBP21.18■□□□□ 0.98
PHRF1-205ENST00000533464 ERICH2A1L162 156 aa21.17■□□□□ 0.98
PHRF1-205ENST00000533464 ERC1Q8IUD2 1116 aa21.16■□□□□ 0.98
PHRF1-205ENST00000533464 RSPH6AQ9H0K4 717 aa21.16■□□□□ 0.98
PHRF1-205ENST00000533464 STRN4Q9NRL3 753 aa21.16■□□□□ 0.98
PHRF1-205ENST00000533464 PTPRKQ15262 1439 aa21.16■□□□□ 0.98
PHRF1-205ENST00000533464 MCM2P49736 904 aa21.16■□□□□ 0.98
PHRF1-205ENST00000533464 RARSP54136 660 aaKnown RBP21.16■□□□□ 0.98
PHRF1-205ENST00000533464 CCDC73Q6ZRK6 1079 aa21.15■□□□□ 0.98
PHRF1-205ENST00000533464 FBXO31Q5XUX0 539 aaPredicted RBP21.15■□□□□ 0.98
PHRF1-205ENST00000533464 MRE11P49959 708 aa21.15■□□□□ 0.98
PHRF1-205ENST00000533464 SASS6Q6UVJ0 657 aa21.15■□□□□ 0.98
PHRF1-205ENST00000533464 RAD21O60216 631 aa21.14■□□□□ 0.98
PHRF1-205ENST00000533464 SSH1Q8WYL5 1049 aa21.14■□□□□ 0.98
PHRF1-205ENST00000533464 RBM42Q9BTD8 480 aaKnown RBP21.14■□□□□ 0.98
PHRF1-205ENST00000533464 THOC2Q8NI27 1593 aaKnown RBP21.14■□□□□ 0.97
PHRF1-205ENST00000533464 NOC3LQ8WTT2 800 aaKnown RBP21.14■□□□□ 0.97
PHRF1-205ENST00000533464 FAM177BA6PVY3 158 aa21.13■□□□□ 0.97
PHRF1-205ENST00000533464 GPATCH8Q9UKJ3 1502 aaKnown RBP21.13■□□□□ 0.97
PHRF1-205ENST00000533464 TSR1Q2NL82 804 aaKnown RBP21.13■□□□□ 0.97
PHRF1-205ENST00000533464 NME9Q86XW9 330 aa21.13■□□□□ 0.97
PHRF1-205ENST00000533464 DCTN1Q14203 1278 aa21.13■□□□□ 0.97
PHRF1-205ENST00000533464 CCDC27Q2M243 656 aa21.13■□□□□ 0.97
PHRF1-205ENST00000533464 MIS18AQ9NYP9 233 aa21.13■□□□□ 0.97
PHRF1-205ENST00000533464 XPCQ01831 940 aaPredicted RBP21.13■□□□□ 0.97
PHRF1-205ENST00000533464 RNF214Q8ND24 703 aa21.12■□□□□ 0.97
PHRF1-205ENST00000533464 SIL1Q9H173 461 aa21.12■□□□□ 0.97
PHRF1-205ENST00000533464 HIP1O00291 1037 aa21.12■□□□□ 0.97
PHRF1-205ENST00000533464 CAVIN1Q6NZI2 390 aaKnown RBP21.12■□□□□ 0.97
PHRF1-205ENST00000533464 MCM10Q7L590 875 aa21.12■□□□□ 0.97
PHRF1-205ENST00000533464 SKAP1Q86WV1 359 aa21.12■□□□□ 0.97
PHRF1-205ENST00000533464 FBXW7Q969H0 707 aa21.12■□□□□ 0.97
PHRF1-205ENST00000533464 DHX16O60231 1041 aaKnown RBP21.12■□□□□ 0.97
PHRF1-205ENST00000533464 SAFBQ15424 915 aaKnown RBP eCLIP21.12■□□□□ 0.97
PHRF1-205ENST00000533464 RPAP2Q8IXW5 612 aaPredicted RBP21.12■□□□□ 0.97
PHRF1-205ENST00000533464 CABP4P57796 275 aa21.12■□□□□ 0.97
PHRF1-205ENST00000533464 SRGAP3O43295 1099 aa21.11■□□□□ 0.97
PHRF1-205ENST00000533464 PRPF40AO75400 957 aaKnown RBP21.11■□□□□ 0.97
PHRF1-205ENST00000533464 NASPP49321 788 aaPredicted RBP21.11■□□□□ 0.97
PHRF1-205ENST00000533464 TPM1P09493 284 aa21.11■□□□□ 0.97
PHRF1-205ENST00000533464 ZNF592Q92610 1267 aa21.11■□□□□ 0.97
PHRF1-205ENST00000533464 MYL6BP14649 208 aa21.1■□□□□ 0.97
PHRF1-205ENST00000533464 TOM1L2Q6ZVM7 507 aa21.1■□□□□ 0.97
PHRF1-205ENST00000533464 EMILIN1Q9Y6C2 1016 aa21.1■□□□□ 0.97
PHRF1-205ENST00000533464 DISP3Q9P2K9 1392 aa21.1■□□□□ 0.97
PHRF1-205ENST00000533464 DDX54Q8TDD1 881 aaKnown RBP21.1■□□□□ 0.97
PHRF1-205ENST00000533464 HSP90AA2PQ14568 343 aaPredicted RBP21.1■□□□□ 0.97
PHRF1-205ENST00000533464 SCAF11Q99590 1463 aaKnown RBP21.09■□□□□ 0.97
PHRF1-205ENST00000533464 SPG7Q9UQ90 795 aa21.09■□□□□ 0.97
PHRF1-205ENST00000533464 KIF6Q6ZMV9 814 aa21.09■□□□□ 0.97
PHRF1-205ENST00000533464 IL1RAPL2Q9NP60 686 aa21.09■□□□□ 0.97
PHRF1-205ENST00000533464 BTBD11A6QL63 1104 aa21.09■□□□□ 0.97
PHRF1-205ENST00000533464 MAP4K4O95819 1239 aaPredicted RBP21.09■□□□□ 0.97
PHRF1-205ENST00000533464 DUSP27Q5VZP5 1158 aa21.09■□□□□ 0.97
PHRF1-205ENST00000533464 HOOK1Q9UJC3 728 aaKnown RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms