RNA–Protein interactions for RNA: ENST00000533411.5

SOX6-215, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-215ENST00000533411 PHF8Q9UPP1 1060 aa9.69□□□□□ -0.86
SOX6-215ENST00000533411 MARF1Q9Y4F3 1742 aaKnown RBP9.69□□□□□ -0.86
SOX6-215ENST00000533411 TULP4Q9NRJ4 1543 aa9.68□□□□□ -0.86
SOX6-215ENST00000533411 KRT28Q7Z3Y7 464 aa9.68□□□□□ -0.86
SOX6-215ENST00000533411 PMFBP1Q8TBY8 1022 aa9.68□□□□□ -0.86
SOX6-215ENST00000533411 YTHDC1Q96MU7 727 aaKnown RBP9.68□□□□□ -0.86
SOX6-215ENST00000533411 ANKARQ7Z5J8 1434 aa9.67□□□□□ -0.86
SOX6-215ENST00000533411 CCER2I3L3R5 266 aa9.67□□□□□ -0.86
SOX6-215ENST00000533411 PLEKHG5O94827 1062 aa9.67□□□□□ -0.86
SOX6-215ENST00000533411 ZNF772Q68DY9 489 aaPredicted RBP9.67□□□□□ -0.86
SOX6-215ENST00000533411 ABCA3Q99758 1704 aa9.67□□□□□ -0.86
SOX6-215ENST00000533411 TRPM3Q9HCF6 1732 aaPredicted RBP9.67□□□□□ -0.86
SOX6-215ENST00000533411 SPATA31A3Q5VYP0 1347 aa9.66□□□□□ -0.86
SOX6-215ENST00000533411 ITSN1Q15811 1721 aa9.66□□□□□ -0.86
SOX6-215ENST00000533411 WASLO00401 505 aaPredicted RBP9.66□□□□□ -0.86
SOX6-215ENST00000533411 NGLY1Q96IV0 654 aa9.66□□□□□ -0.86
SOX6-215ENST00000533411 QRICH2Q9H0J4 1663 aa9.66□□□□□ -0.86
SOX6-215ENST00000533411 ATP7BP35670 1465 aa9.66□□□□□ -0.86
SOX6-215ENST00000533411 TNS3Q68CZ2 1445 aa9.65□□□□□ -0.86
SOX6-215ENST00000533411 TOPAZ1Q8N9V7 1692 aa9.65□□□□□ -0.86
SOX6-215ENST00000533411 ST20-MTHFSA0A0A6YYL1 179 aa9.65□□□□□ -0.86
SOX6-215ENST00000533411 POLA2Q14181 598 aa9.65□□□□□ -0.86
SOX6-215ENST00000533411 ALS2Q96Q42 1657 aa9.64□□□□□ -0.87
SOX6-215ENST00000533411 C11orf95C9JLR9 678 aaPredicted RBP9.64□□□□□ -0.87
SOX6-215ENST00000533411 PSME1Q06323 249 aa9.64□□□□□ -0.87
SOX6-215ENST00000533411 LMOD2Q6P5Q4 547 aa9.64□□□□□ -0.87
SOX6-215ENST00000533411 CABLES1Q8TDN4 633 aa9.64□□□□□ -0.87
SOX6-215ENST00000533411 POLR3GLQ9BT43 218 aa9.64□□□□□ -0.87
SOX6-215ENST00000533411 QTRT2Q9H974 415 aaKnown RBP9.64□□□□□ -0.87
SOX6-215ENST00000533411 SBNO1A3KN83 1393 aa9.63□□□□□ -0.87
SOX6-215ENST00000533411 RXRBP28702 533 aa9.63□□□□□ -0.87
SOX6-215ENST00000533411 CDK19Q9BWU1 502 aa9.63□□□□□ -0.87
SOX6-215ENST00000533411 MYOM1P52179 1685 aa9.63□□□□□ -0.87
SOX6-215ENST00000533411 CENPJQ9HC77 1338 aaPredicted RBP9.62□□□□□ -0.87
SOX6-215ENST00000533411 TMF1P82094 1093 aa9.62□□□□□ -0.87
SOX6-215ENST00000533411 NUDT16Q96DE0 195 aaKnown RBP9.62□□□□□ -0.87
SOX6-215ENST00000533411 USP21Q9UK80 565 aa9.62□□□□□ -0.87
SOX6-215ENST00000533411 RGS12O14924 1447 aa9.62□□□□□ -0.87
SOX6-215ENST00000533411 CRYBG1Q9Y4K1 1723 aa9.62□□□□□ -0.87
SOX6-215ENST00000533411 PLCH1Q4KWH8 1693 aa9.61□□□□□ -0.87
SOX6-215ENST00000533411 BCL9LQ86UU0 1499 aa9.61□□□□□ -0.87
SOX6-215ENST00000533411 CDK12Q9NYV4 1490 aaPredicted RBP9.61□□□□□ -0.87
SOX6-215ENST00000533411 CHRDL2Q6WN34 429 aa9.61□□□□□ -0.87
SOX6-215ENST00000533411 FNBP4Q8N3X1 1017 aaPredicted RBP9.61□□□□□ -0.87
SOX6-215ENST00000533411 NGDNQ8NEJ9 315 aaKnown RBP9.61□□□□□ -0.87
SOX6-215ENST00000533411 ATRNO75882 1429 aa9.61□□□□□ -0.87
SOX6-215ENST00000533411 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.61□□□□□ -0.87
SOX6-215ENST00000533411 ARHGEF10O15013 1369 aa9.61□□□□□ -0.87
SOX6-215ENST00000533411 HAP1P54257 671 aaPredicted RBP9.6□□□□□ -0.87
SOX6-215ENST00000533411 RBM6P78332 1123 aaKnown RBP9.6□□□□□ -0.87
SOX6-215ENST00000533411 SLIT2O94813 1529 aa9.6□□□□□ -0.87
SOX6-215ENST00000533411 SBNO2Q9Y2G9 1366 aa9.6□□□□□ -0.87
SOX6-215ENST00000533411 PAK3O75914 559 aaPredicted RBP9.59□□□□□ -0.87
SOX6-215ENST00000533411 CDCA8Q53HL2 280 aa9.59□□□□□ -0.87
SOX6-215ENST00000533411 TESK2Q96S53 571 aa9.59□□□□□ -0.87
SOX6-215ENST00000533411 CABP2Q9NPB3 220 aa9.59□□□□□ -0.87
SOX6-215ENST00000533411 TRPC5Q9UL62 973 aaPredicted RBP9.59□□□□□ -0.87
SOX6-215ENST00000533411 KTN1Q86UP2 1357 aaKnown RBP9.59□□□□□ -0.87
SOX6-215ENST00000533411 ACEP12821 1306 aa9.58□□□□□ -0.88
SOX6-215ENST00000533411 PHRF1Q9P1Y6 1649 aaKnown RBP9.58□□□□□ -0.88
SOX6-215ENST00000533411 SRPK2P78362 688 aaKnown RBP9.58□□□□□ -0.88
SOX6-215ENST00000533411 PRKRIP1Q9H875 184 aaPredicted RBP9.58□□□□□ -0.88
SOX6-215ENST00000533411 POLR3AO14802 1390 aaPredicted RBP9.58□□□□□ -0.88
SOX6-215ENST00000533411 GLI3P10071 1580 aa9.58□□□□□ -0.88
SOX6-215ENST00000533411 PPIP5K1Q6PFW1 1433 aa9.57□□□□□ -0.88
SOX6-215ENST00000533411 NRAPQ86VF7 1730 aa9.57□□□□□ -0.88
SOX6-215ENST00000533411 NWD2Q9ULI1 1742 aa9.57□□□□□ -0.88
SOX6-215ENST00000533411 MYCNP04198 464 aaPredicted RBP9.57□□□□□ -0.88
SOX6-215ENST00000533411 NUTM2GQ5VZR2 741 aa9.57□□□□□ -0.88
SOX6-215ENST00000533411 CCDC61Q9Y6R9 512 aa9.57□□□□□ -0.88
SOX6-215ENST00000533411 PLEKHG3A1L390 1219 aa9.56□□□□□ -0.88
SOX6-215ENST00000533411 FAM83GA6ND36 823 aa9.56□□□□□ -0.88
SOX6-215ENST00000533411 UNC5CLQ8IV45 518 aa9.56□□□□□ -0.88
SOX6-215ENST00000533411 UPF1Q92900 1129 aaKnown RBP eCLIP9.56□□□□□ -0.88
SOX6-215ENST00000533411 COL14A1Q05707 1796 aaKnown RBP9.55□□□□□ -0.88
SOX6-215ENST00000533411 BRWD3Q6RI45 1802 aa9.55□□□□□ -0.88
SOX6-215ENST00000533411 EVC2Q86UK5 1308 aa9.55□□□□□ -0.88
SOX6-215ENST00000533411 AMER1Q5JTC6 1135 aaPredicted RBP9.54□□□□□ -0.88
SOX6-215ENST00000533411 GJD4Q96KN9 370 aaPredicted RBP9.54□□□□□ -0.88
SOX6-215ENST00000533411 CABP1Q9NZU7 370 aa9.54□□□□□ -0.88
SOX6-215ENST00000533411 AKAP12Q02952 1782 aa9.54□□□□□ -0.88
SOX6-215ENST00000533411 NRKQ7Z2Y5 1582 aa9.54□□□□□ -0.88
SOX6-215ENST00000533411 MRS2Q9HD23 443 aa9.53□□□□□ -0.88
SOX6-215ENST00000533411 PARD3Q8TEW0 1356 aa9.52□□□□□ -0.88
SOX6-215ENST00000533411 PIK3C2AO00443 1686 aa9.52□□□□□ -0.89
SOX6-215ENST00000533411 USP6P35125 1406 aa9.52□□□□□ -0.89
SOX6-215ENST00000533411 RALBP1Q15311 655 aa9.52□□□□□ -0.89
SOX6-215ENST00000533411 CHRNA2Q15822 529 aa9.52□□□□□ -0.89
SOX6-215ENST00000533411 VPS72Q15906 364 aa9.52□□□□□ -0.89
SOX6-215ENST00000533411 PRDM11Q9NQV5 511 aa9.52□□□□□ -0.89
SOX6-215ENST00000533411 BTG4Q9NY30 223 aa9.52□□□□□ -0.89
SOX6-215ENST00000533411 CCDC9Q9Y3X0 531 aaKnown RBP9.52□□□□□ -0.89
SOX6-215ENST00000533411 MYBBP1AQ9BQG0 1328 aaKnown RBP9.52□□□□□ -0.89
SOX6-215ENST00000533411 KIAA0232Q92628 1395 aa9.51□□□□□ -0.89
SOX6-215ENST00000533411 ZC3H6P61129 1189 aaKnown RBP9.51□□□□□ -0.89
SOX6-215ENST00000533411 ABTB2Q8N961 1025 aa9.51□□□□□ -0.89
SOX6-215ENST00000533411 USP19O94966 1318 aa9.51□□□□□ -0.89
SOX6-215ENST00000533411 BRD4O60885 1362 aaPredicted RBP9.5□□□□□ -0.89
SOX6-215ENST00000533411 ATAD2Q6PL18 1390 aa9.5□□□□□ -0.89
SOX6-215ENST00000533411 SSH2Q76I76 1423 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms