RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 ZNF692Q9BU19 519 aaPredicted RBP34.61■■■■□ 3.13
USP48-214ENST00000532737 CPSF1Q10570 1443 aaKnown RBP34.61■■■■□ 3.13
USP48-214ENST00000532737 USP6P35125 1406 aa34.6■■■■□ 3.13
USP48-214ENST00000532737 AFF2P51816 1311 aa34.59■■■■□ 3.13
USP48-214ENST00000532737 CD163L1Q9NR16 1453 aa34.58■■■■□ 3.13
USP48-214ENST00000532737 CDK12Q9NYV4 1490 aaPredicted RBP34.58■■■■□ 3.13
USP48-214ENST00000532737 C11orf95C9JLR9 678 aaPredicted RBP34.58■■■■□ 3.13
USP48-214ENST00000532737 ZEB1P37275 1124 aaPredicted RBP34.57■■■■□ 3.12
USP48-214ENST00000532737 ARHGEF10O15013 1369 aa34.57■■■■□ 3.12
USP48-214ENST00000532737 NINLQ9Y2I6 1382 aa34.57■■■■□ 3.12
USP48-214ENST00000532737 SSH2Q76I76 1423 aa34.55■■■■□ 3.12
USP48-214ENST00000532737 BRD4O60885 1362 aaPredicted RBP34.55■■■■□ 3.12
USP48-214ENST00000532737 KTN1Q86UP2 1357 aaKnown RBP34.55■■■■□ 3.12
USP48-214ENST00000532737 RXRBP28702 533 aa34.55■■■■□ 3.12
USP48-214ENST00000532737 COL22A1Q8NFW1 1626 aaPredicted RBP34.55■■■■□ 3.12
USP48-214ENST00000532737 HDGFL2Q7Z4V5 671 aaPredicted RBP34.54■■■■□ 3.12
USP48-214ENST00000532737 TERF2IPQ9NYB0 399 aa34.54■■■■□ 3.12
USP48-214ENST00000532737 PLEKHG5O94827 1062 aa34.53■■■■□ 3.12
USP48-214ENST00000532737 POLR3GLQ9BT43 218 aa34.53■■■■□ 3.12
USP48-214ENST00000532737 ALS2Q96Q42 1657 aa34.53■■■■□ 3.12
USP48-214ENST00000532737 CABLES1Q8TDN4 633 aa34.52■■■■□ 3.12
USP48-214ENST00000532737 A0A1W2PP64 1363 aa34.51■■■■□ 3.12
USP48-214ENST00000532737 AKAP12Q02952 1782 aa34.51■■■■□ 3.11
USP48-214ENST00000532737 TTC21BQ7Z4L5 1316 aa34.51■■■■□ 3.11
USP48-214ENST00000532737 NUTM2GQ5VZR2 741 aa34.5■■■■□ 3.11
USP48-214ENST00000532737 UPF1Q92900 1129 aaKnown RBP eCLIP34.5■■■■□ 3.11
USP48-214ENST00000532737 ABTB2Q8N961 1025 aa34.49■■■■□ 3.11
USP48-214ENST00000532737 C8orf37Q96NL8 207 aa34.49■■■■□ 3.11
USP48-214ENST00000532737 ADAMTS2O95450 1211 aa34.47■■■■□ 3.11
USP48-214ENST00000532737 ANKRD36BQ8N2N9 1353 aa34.46■■■■□ 3.11
USP48-214ENST00000532737 MON2Q7Z3U7 1717 aa34.44■■■■□ 3.1
USP48-214ENST00000532737 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.43■■■■□ 3.1
USP48-214ENST00000532737 KIF7Q2M1P5 1343 aa34.43■■■■□ 3.1
USP48-214ENST00000532737 TTC21AQ8NDW8 1320 aa34.43■■■■□ 3.1
USP48-214ENST00000532737 RGS12O14924 1447 aa34.42■■■■□ 3.1
USP48-214ENST00000532737 MYOM1P52179 1685 aa34.41■■■■□ 3.1
USP48-214ENST00000532737 NRKQ7Z2Y5 1582 aa34.41■■■■□ 3.1
USP48-214ENST00000532737 EDC4Q6P2E9 1401 aaKnown RBP34.41■■■■□ 3.1
USP48-214ENST00000532737 HAP1P54257 671 aaPredicted RBP34.41■■■■□ 3.1
USP48-214ENST00000532737 NLRP6P59044 892 aa34.4■■■■□ 3.1
USP48-214ENST00000532737 NLRP13Q86W25 1043 aa34.4■■■■□ 3.1
USP48-214ENST00000532737 QTRT2Q9H974 415 aaKnown RBP34.4■■■■□ 3.1
USP48-214ENST00000532737 MARF1Q9Y4F3 1742 aaKnown RBP34.39■■■■□ 3.1
USP48-214ENST00000532737 RBM6P78332 1123 aaKnown RBP34.37■■■■□ 3.09
USP48-214ENST00000532737 NME9Q86XW9 330 aa34.37■■■■□ 3.09
USP48-214ENST00000532737 NGLY1Q96IV0 654 aa34.37■■■■□ 3.09
USP48-214ENST00000532737 CARD14Q9BXL6 1004 aa34.37■■■■□ 3.09
USP48-214ENST00000532737 USP19O94966 1318 aa34.36■■■■□ 3.09
USP48-214ENST00000532737 ZRANB1Q9UGI0 708 aa34.36■■■■□ 3.09
USP48-214ENST00000532737 PIK3C2AO00443 1686 aa34.35■■■■□ 3.09
USP48-214ENST00000532737 ABCA3Q99758 1704 aa34.34■■■■□ 3.09
USP48-214ENST00000532737 WASHC2AQ641Q2 1341 aa34.33■■■■□ 3.09
USP48-214ENST00000532737 CCDC7Q96M83 1385 aa34.33■■■■□ 3.09
USP48-214ENST00000532737 CRYBG1Q9Y4K1 1723 aa34.32■■■■□ 3.08
USP48-214ENST00000532737 PANK3Q9H999 370 aa34.3■■■■□ 3.08
USP48-214ENST00000532737 USP31Q70CQ4 1352 aa34.3■■■■□ 3.08
USP48-214ENST00000532737 GCP02774 474 aa34.29■■■■□ 3.08
USP48-214ENST00000532737 FNBP4Q8N3X1 1017 aaPredicted RBP34.28■■■■□ 3.08
USP48-214ENST00000532737 USP21Q9UK80 565 aa34.27■■■■□ 3.08
USP48-214ENST00000532737 NSD3Q9BZ95 1437 aa34.27■■■■□ 3.08
USP48-214ENST00000532737 PHRF1Q9P1Y6 1649 aaKnown RBP34.26■■■■□ 3.08
USP48-214ENST00000532737 FAM83GA6ND36 823 aa34.26■■■■□ 3.08
USP48-214ENST00000532737 ZC3H6P61129 1189 aaKnown RBP34.26■■■■□ 3.08
USP48-214ENST00000532737 SLIT3O75094 1523 aa34.25■■■■□ 3.07
USP48-214ENST00000532737 ATRNO75882 1429 aa34.24■■■■□ 3.07
USP48-214ENST00000532737 FYB1O15117 783 aa34.24■■■■□ 3.07
USP48-214ENST00000532737 KIAA0232Q92628 1395 aa34.23■■■■□ 3.07
USP48-214ENST00000532737 PRDM11Q9NQV5 511 aa34.21■■■■□ 3.07
USP48-214ENST00000532737 TRPC5Q9UL62 973 aaPredicted RBP34.21■■■■□ 3.07
USP48-214ENST00000532737 OVOS2A0A0J9YW53 1432 aa34.21■■■■□ 3.07
USP48-214ENST00000532737 OVOS2Q6IE36 1432 aa34.21■■■■□ 3.07
USP48-214ENST00000532737 SOX12O15370 315 aa34.2■■■■□ 3.07
USP48-214ENST00000532737 GGNBP2Q9H3C7 697 aa34.2■■■■□ 3.07
USP48-214ENST00000532737 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.19■■■■□ 3.06
USP48-214ENST00000532737 KCNH5Q8NCM2 988 aa34.19■■■■□ 3.06
USP48-214ENST00000532737 BCL9LQ86UU0 1499 aa34.19■■■■□ 3.06
USP48-214ENST00000532737 CHRNA2Q15822 529 aa34.18■■■■□ 3.06
USP48-214ENST00000532737 CPDO75976 1380 aa34.18■■■■□ 3.06
USP48-214ENST00000532737 SLIT2O94813 1529 aa34.17■■■■□ 3.06
USP48-214ENST00000532737 COG3Q96JB2 828 aa34.17■■■■□ 3.06
USP48-214ENST00000532737 USP54Q70EL1 1684 aa34.16■■■■□ 3.06
USP48-214ENST00000532737 CGNL1Q0VF96 1302 aa34.14■■■■□ 3.06
USP48-214ENST00000532737 ZBTB7CA1YPR0 619 aa34.12■■■■□ 3.05
USP48-214ENST00000532737 BTG4Q9NY30 223 aa34.12■■■■□ 3.05
USP48-214ENST00000532737 NFAT5O94916 1531 aa34.12■■■■□ 3.05
USP48-214ENST00000532737 ARHGEF25Q86VW2 580 aa34.11■■■■□ 3.05
USP48-214ENST00000532737 UNC5CLQ8IV45 518 aa34.11■■■■□ 3.05
USP48-214ENST00000532737 COL14A1Q05707 1796 aaKnown RBP34.11■■■■□ 3.05
USP48-214ENST00000532737 KNSTRNQ9Y448 316 aa34.09■■■■□ 3.05
USP48-214ENST00000532737 EP400Q96L91 3159 aa34.09■■■■□ 3.05
USP48-214ENST00000532737 PLCH1Q4KWH8 1693 aa34.07■■■■□ 3.04
USP48-214ENST00000532737 PER1O15534 1290 aaPredicted RBP34.07■■■■□ 3.04
USP48-214ENST00000532737 FBLN1P23142 703 aa34.07■■■■□ 3.04
USP48-214ENST00000532737 KIF20BQ96Q89 1820 aa34.07■■■■□ 3.04
USP48-214ENST00000532737 AATKQ6ZMQ8 1374 aa34.06■■■■□ 3.04
USP48-214ENST00000532737 GLI3P10071 1580 aa34.04■■■■□ 3.04
USP48-214ENST00000532737 NWD2Q9ULI1 1742 aa34.03■■■■□ 3.04
USP48-214ENST00000532737 CAMTA1Q9Y6Y1 1673 aa34.03■■■■□ 3.04
USP48-214ENST00000532737 AMER1Q5JTC6 1135 aaPredicted RBP34.02■■■■□ 3.04
USP48-214ENST00000532737 GJD4Q96KN9 370 aaPredicted RBP34.01■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms