RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 ADAMTSL3P82987 1691 aa19.97■□□□□ 0.79
SRPRA-206ENST00000532259 C20orf194Q5TEA3 1177 aa19.96■□□□□ 0.79
SRPRA-206ENST00000532259 TRMT2AQ8IZ69 625 aaKnown RBP19.95■□□□□ 0.78
SRPRA-206ENST00000532259 KIF20BQ96Q89 1820 aa19.95■□□□□ 0.78
SRPRA-206ENST00000532259 ANKRD26Q9UPS8 1709 aa19.95■□□□□ 0.78
SRPRA-206ENST00000532259 TBX22Q9Y458 520 aa19.95■□□□□ 0.78
SRPRA-206ENST00000532259 POLKQ9UBT6 870 aa19.94■□□□□ 0.78
SRPRA-206ENST00000532259 COL3A1P02461 1466 aaPredicted RBP19.94■□□□□ 0.78
SRPRA-206ENST00000532259 EMILIN1Q9Y6C2 1016 aa19.94■□□□□ 0.78
SRPRA-206ENST00000532259 IQSEC2Q5JU85 1478 aa19.92■□□□□ 0.78
SRPRA-206ENST00000532259 CEP170BQ9Y4F5 1589 aaPredicted RBP19.92■□□□□ 0.78
SRPRA-206ENST00000532259 EDC4Q6P2E9 1401 aaKnown RBP19.92■□□□□ 0.78
SRPRA-206ENST00000532259 RBM33Q96EV2 1170 aaKnown RBP19.92■□□□□ 0.78
SRPRA-206ENST00000532259 KCNA6P17658 529 aa19.91■□□□□ 0.78
SRPRA-206ENST00000532259 CRBNQ96SW2 442 aa19.91■□□□□ 0.78
SRPRA-206ENST00000532259 CDC42BPGQ6DT37 1551 aa19.91■□□□□ 0.78
SRPRA-206ENST00000532259 ACEP12821 1306 aa19.91■□□□□ 0.78
SRPRA-206ENST00000532259 RRS1Q15050 365 aaKnown RBP19.9■□□□□ 0.78
SRPRA-206ENST00000532259 PMFBP1Q8TBY8 1022 aa19.9■□□□□ 0.78
SRPRA-206ENST00000532259 RBM19Q9Y4C8 960 aaKnown RBP19.9■□□□□ 0.78
SRPRA-206ENST00000532259 E9PSI1 815 aa19.9■□□□□ 0.78
SRPRA-206ENST00000532259 DIAPH1O60610 1272 aaKnown RBP19.9■□□□□ 0.78
SRPRA-206ENST00000532259 BCAR3O75815 825 aa19.89■□□□□ 0.77
SRPRA-206ENST00000532259 PLEKHF1Q96S99 279 aa19.89■□□□□ 0.77
SRPRA-206ENST00000532259 NKTRP30414 1462 aaKnown RBP19.89■□□□□ 0.77
SRPRA-206ENST00000532259 PNPLA6Q8IY17 1366 aa19.88■□□□□ 0.77
SRPRA-206ENST00000532259 PHF23Q9BUL5 403 aaPredicted RBP19.87■□□□□ 0.77
SRPRA-206ENST00000532259 MAP2P11137 1827 aaKnown RBP19.87■□□□□ 0.77
SRPRA-206ENST00000532259 COG3Q96JB2 828 aa19.86■□□□□ 0.77
SRPRA-206ENST00000532259 ADGRB2O60241 1585 aa19.85■□□□□ 0.77
SRPRA-206ENST00000532259 MON2Q7Z3U7 1717 aa19.85■□□□□ 0.77
SRPRA-206ENST00000532259 SOX12O15370 315 aa19.84■□□□□ 0.77
SRPRA-206ENST00000532259 HMOX1P09601 288 aa19.84■□□□□ 0.77
SRPRA-206ENST00000532259 ZNF692Q9BU19 519 aaPredicted RBP19.84■□□□□ 0.77
SRPRA-206ENST00000532259 TTC21BQ7Z4L5 1316 aa19.84■□□□□ 0.77
SRPRA-206ENST00000532259 AKAP12Q02952 1782 aa19.84■□□□□ 0.77
SRPRA-206ENST00000532259 NGEFQ8N5V2 710 aa19.83■□□□□ 0.77
SRPRA-206ENST00000532259 ITSN1Q15811 1721 aa19.83■□□□□ 0.77
SRPRA-206ENST00000532259 PTCH1Q13635 1447 aa19.83■□□□□ 0.76
SRPRA-206ENST00000532259 PLEKHG3A1L390 1219 aa19.83■□□□□ 0.76
SRPRA-206ENST00000532259 TMPOP42166 694 aaKnown RBP19.83■□□□□ 0.76
SRPRA-206ENST00000532259 ANKLE2Q86XL3 938 aa19.83■□□□□ 0.76
SRPRA-206ENST00000532259 RGPD8O14715 1765 aaPredicted RBP19.82■□□□□ 0.76
SRPRA-206ENST00000532259 MAPK8IP3Q9UPT6 1336 aa19.82■□□□□ 0.76
SRPRA-206ENST00000532259 TRIM35Q9UPQ4 493 aa19.81■□□□□ 0.76
SRPRA-206ENST00000532259 TOPAZ1Q8N9V7 1692 aa19.8■□□□□ 0.76
SRPRA-206ENST00000532259 BCL2L13Q9BXK5 485 aa19.8■□□□□ 0.76
SRPRA-206ENST00000532259 PRKAR2BP31323 418 aa19.8■□□□□ 0.76
SRPRA-206ENST00000532259 TSR2Q969E8 191 aaKnown RBP19.8■□□□□ 0.76
SRPRA-206ENST00000532259 USP6P35125 1406 aa19.8■□□□□ 0.76
SRPRA-206ENST00000532259 DIP2AQ14689 1571 aa19.8■□□□□ 0.76
SRPRA-206ENST00000532259 XRN1Q8IZH2 1706 aaKnown RBP19.8■□□□□ 0.76
SRPRA-206ENST00000532259 CCDC27Q2M243 656 aa19.79■□□□□ 0.76
SRPRA-206ENST00000532259 WDR63Q8IWG1 891 aa19.79■□□□□ 0.76
SRPRA-206ENST00000532259 PHACTR3Q96KR7 559 aa19.79■□□□□ 0.76
SRPRA-206ENST00000532259 IL13P35225 146 aa19.79■□□□□ 0.76
SRPRA-206ENST00000532259 SKAP1Q86WV1 359 aa19.79■□□□□ 0.76
SRPRA-206ENST00000532259 RSPH6AQ9H0K4 717 aa19.79■□□□□ 0.76
SRPRA-206ENST00000532259 RIPK4P57078 832 aa19.78■□□□□ 0.76
SRPRA-206ENST00000532259 NGDNQ8NEJ9 315 aaKnown RBP19.78■□□□□ 0.76
SRPRA-206ENST00000532259 FRAT1Q92837 279 aaPredicted RBP19.77■□□□□ 0.76
SRPRA-206ENST00000532259 LRRC7Q96NW7 1537 aa19.77■□□□□ 0.76
SRPRA-206ENST00000532259 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.76■□□□□ 0.75
SRPRA-206ENST00000532259 NRKQ7Z2Y5 1582 aa19.76■□□□□ 0.75
SRPRA-206ENST00000532259 AATKQ6ZMQ8 1374 aa19.76■□□□□ 0.75
SRPRA-206ENST00000532259 CANXP27824 592 aaKnown RBP19.76■□□□□ 0.75
SRPRA-206ENST00000532259 KDM4FA0A1W2PPD8 638 aa19.75■□□□□ 0.75
SRPRA-206ENST00000532259 FCHSD2O94868 740 aa19.75■□□□□ 0.75
SRPRA-206ENST00000532259 NUTM2GQ5VZR2 741 aa19.75■□□□□ 0.75
SRPRA-206ENST00000532259 SETD1BQ9UPS6 1966 aaKnown RBP19.74■□□□□ 0.75
SRPRA-206ENST00000532259 TNNQ9UQP3 1299 aa19.74■□□□□ 0.75
SRPRA-206ENST00000532259 SSH2Q76I76 1423 aa19.73■□□□□ 0.75
SRPRA-206ENST00000532259 THUMPD2Q9BTF0 503 aaKnown RBP19.73■□□□□ 0.75
SRPRA-206ENST00000532259 OVOS2A0A0J9YW53 1432 aa19.73■□□□□ 0.75
SRPRA-206ENST00000532259 OVOS2Q6IE36 1432 aa19.73■□□□□ 0.75
SRPRA-206ENST00000532259 CDK12Q9NYV4 1490 aaPredicted RBP19.73■□□□□ 0.75
SRPRA-206ENST00000532259 RARSP54136 660 aaKnown RBP19.73■□□□□ 0.75
SRPRA-206ENST00000532259 ZNF142P52746 1687 aaPredicted RBP19.72■□□□□ 0.75
SRPRA-206ENST00000532259 HSP90AB2PQ58FF8 381 aa19.72■□□□□ 0.75
SRPRA-206ENST00000532259 FANCIQ9NVI1 1328 aa19.72■□□□□ 0.75
SRPRA-206ENST00000532259 PANK1Q8TE04 598 aa19.71■□□□□ 0.75
SRPRA-206ENST00000532259 AEBP1Q8IUX7 1158 aa19.71■□□□□ 0.75
SRPRA-206ENST00000532259 PIK3R4Q99570 1358 aa19.7■□□□□ 0.74
SRPRA-206ENST00000532259 LAS1LQ9Y4W2 734 aaKnown RBP19.7■□□□□ 0.74
SRPRA-206ENST00000532259 EIF4A2Q14240 407 aaKnown RBP19.7■□□□□ 0.74
SRPRA-206ENST00000532259 MYH16Q9H6N6 1097 aa19.7■□□□□ 0.74
SRPRA-206ENST00000532259 EXOSC9Q06265 439 aaKnown RBP19.69■□□□□ 0.74
SRPRA-206ENST00000532259 CHD2O14647 1828 aaKnown RBP19.69■□□□□ 0.74
SRPRA-206ENST00000532259 COG6Q9Y2V7 657 aa19.68■□□□□ 0.74
SRPRA-206ENST00000532259 NEFMP07197 916 aa19.68■□□□□ 0.74
SRPRA-206ENST00000532259 CLUAP1Q96AJ1 413 aa19.68■□□□□ 0.74
SRPRA-206ENST00000532259 NALCNQ8IZF0 1738 aa19.67■□□□□ 0.74
SRPRA-206ENST00000532259 NCBP3Q53F19 620 aaKnown RBP19.67■□□□□ 0.74
SRPRA-206ENST00000532259 NPHP4O75161 1426 aaPredicted RBP19.67■□□□□ 0.74
SRPRA-206ENST00000532259 PEAK1Q9H792 1746 aa19.67■□□□□ 0.74
SRPRA-206ENST00000532259 PAK3O75914 559 aaPredicted RBP19.66■□□□□ 0.74
SRPRA-206ENST00000532259 PNNQ9H307 717 aaKnown RBP19.66■□□□□ 0.74
SRPRA-206ENST00000532259 MAP3K19Q56UN5 1328 aa19.66■□□□□ 0.74
SRPRA-206ENST00000532259 FAM83GA6ND36 823 aa19.66■□□□□ 0.74
SRPRA-206ENST00000532259 RLBP1P12271 317 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms