RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 ALS2Q96Q42 1657 aa18.84■□□□□ 0.61
SF3B2-212ENST00000531589 ABCA3Q99758 1704 aa18.83■□□□□ 0.61
SF3B2-212ENST00000531589 NWD2Q9ULI1 1742 aa18.83■□□□□ 0.61
SF3B2-212ENST00000531589 ACEP12821 1306 aa18.83■□□□□ 0.61
SF3B2-212ENST00000531589 NBPF8Q3BBV2 869 aa18.83■□□□□ 0.6
SF3B2-212ENST00000531589 BTG4Q9NY30 223 aa18.82■□□□□ 0.6
SF3B2-212ENST00000531589 GLI3P10071 1580 aa18.81■□□□□ 0.6
SF3B2-212ENST00000531589 ONECUT3O60422 494 aaPredicted RBP18.81■□□□□ 0.6
SF3B2-212ENST00000531589 PRDM11Q9NQV5 511 aa18.81■□□□□ 0.6
SF3B2-212ENST00000531589 PLCH1Q4KWH8 1693 aa18.8■□□□□ 0.6
SF3B2-212ENST00000531589 SEPT12Q8IYM1 358 aa18.8■□□□□ 0.6
SF3B2-212ENST00000531589 CABP2Q9NPB3 220 aa18.79■□□□□ 0.6
SF3B2-212ENST00000531589 ROCK2O75116 1388 aaKnown RBP18.79■□□□□ 0.6
SF3B2-212ENST00000531589 COL14A1Q05707 1796 aaKnown RBP18.78■□□□□ 0.6
SF3B2-212ENST00000531589 PPIP5K1Q6PFW1 1433 aa18.78■□□□□ 0.6
SF3B2-212ENST00000531589 ABTB2Q8N961 1025 aa18.78■□□□□ 0.6
SF3B2-212ENST00000531589 TOPAZ1Q8N9V7 1692 aa18.78■□□□□ 0.6
SF3B2-212ENST00000531589 EVC2Q86UK5 1308 aa18.77■□□□□ 0.6
SF3B2-212ENST00000531589 BRD4O60885 1362 aaPredicted RBP18.77■□□□□ 0.6
SF3B2-212ENST00000531589 A0A0G2JS52 829 aa18.76■□□□□ 0.59
SF3B2-212ENST00000531589 MYT1Q01538 1121 aa18.76■□□□□ 0.59
SF3B2-212ENST00000531589 TRPM1Q7Z4N2 1603 aa18.75■□□□□ 0.59
SF3B2-212ENST00000531589 NUTM2GQ5VZR2 741 aa18.75■□□□□ 0.59
SF3B2-212ENST00000531589 KRT27Q7Z3Y8 459 aa18.75■□□□□ 0.59
SF3B2-212ENST00000531589 NLRP13Q86W25 1043 aa18.75■□□□□ 0.59
SF3B2-212ENST00000531589 QRICH2Q9H0J4 1663 aa18.75■□□□□ 0.59
SF3B2-212ENST00000531589 KIAA0232Q92628 1395 aa18.74■□□□□ 0.59
SF3B2-212ENST00000531589 CABP1Q9NZU7 370 aa18.74■□□□□ 0.59
SF3B2-212ENST00000531589 ZC3H6P61129 1189 aaKnown RBP18.73■□□□□ 0.59
SF3B2-212ENST00000531589 SF3B2Q13435 895 aaKnown RBP18.73■□□□□ 0.59
SF3B2-212ENST00000531589 FAM98CQ17RN3 349 aaKnown RBP18.73■□□□□ 0.59
SF3B2-212ENST00000531589 CRYBG1Q9Y4K1 1723 aa18.73■□□□□ 0.59
SF3B2-212ENST00000531589 BLMP54132 1417 aaPredicted RBP18.73■□□□□ 0.59
SF3B2-212ENST00000531589 NRAPQ86VF7 1730 aa18.72■□□□□ 0.59
SF3B2-212ENST00000531589 TRIM26Q12899 539 aaPredicted RBP18.72■□□□□ 0.59
SF3B2-212ENST00000531589 SPATA31A5Q5VU36 1347 aa18.72■□□□□ 0.59
SF3B2-212ENST00000531589 SPATA31A7Q8IWB4 1347 aa18.72■□□□□ 0.59
SF3B2-212ENST00000531589 TONSLQ96HA7 1378 aa18.71■□□□□ 0.59
SF3B2-212ENST00000531589 CHRNA2Q15822 529 aa18.71■□□□□ 0.59
SF3B2-212ENST00000531589 EVA1CP58658 441 aa18.7■□□□□ 0.58
SF3B2-212ENST00000531589 ZRANB1Q9UGI0 708 aa18.7■□□□□ 0.58
SF3B2-212ENST00000531589 ZNF692Q9BU19 519 aaPredicted RBP18.69■□□□□ 0.58
SF3B2-212ENST00000531589 STRN4Q9NRL3 753 aa18.69■□□□□ 0.58
SF3B2-212ENST00000531589 PHRF1Q9P1Y6 1649 aaKnown RBP18.69■□□□□ 0.58
SF3B2-212ENST00000531589 USP19O94966 1318 aa18.69■□□□□ 0.58
SF3B2-212ENST00000531589 USP6P35125 1406 aa18.68■□□□□ 0.58
SF3B2-212ENST00000531589 GCP02774 474 aa18.68■□□□□ 0.58
SF3B2-212ENST00000531589 CARD11Q9BXL7 1154 aa18.68■□□□□ 0.58
SF3B2-212ENST00000531589 CPDO75976 1380 aa18.68■□□□□ 0.58
SF3B2-212ENST00000531589 NLRP6P59044 892 aa18.67■□□□□ 0.58
SF3B2-212ENST00000531589 SPATA31A1Q5TZJ5 1347 aa18.67■□□□□ 0.58
SF3B2-212ENST00000531589 BRWD3Q6RI45 1802 aa18.67■□□□□ 0.58
SF3B2-212ENST00000531589 SBNO2Q9Y2G9 1366 aa18.65■□□□□ 0.58
SF3B2-212ENST00000531589 NRKQ7Z2Y5 1582 aa18.64■□□□□ 0.58
SF3B2-212ENST00000531589 EP400Q96L91 3159 aa18.64■□□□□ 0.57
SF3B2-212ENST00000531589 SSH2Q76I76 1423 aa18.63■□□□□ 0.57
SF3B2-212ENST00000531589 BAG6P46379 1132 aa18.62■□□□□ 0.57
SF3B2-212ENST00000531589 BARGINQ6ZT62 677 aa18.62■□□□□ 0.57
SF3B2-212ENST00000531589 USP35Q9P2H5 1018 aa18.62■□□□□ 0.57
SF3B2-212ENST00000531589 TTC21AQ8NDW8 1320 aa18.61■□□□□ 0.57
SF3B2-212ENST00000531589 TTC21BQ7Z4L5 1316 aa18.6■□□□□ 0.57
SF3B2-212ENST00000531589 LARP1Q6PKG0 1096 aaKnown RBP18.6■□□□□ 0.57
SF3B2-212ENST00000531589 DEFB132Q7Z7B7 95 aa18.6■□□□□ 0.57
SF3B2-212ENST00000531589 KCNH5Q8NCM2 988 aa18.6■□□□□ 0.57
SF3B2-212ENST00000531589 THRAP3Q9Y2W1 955 aaKnown RBP18.6■□□□□ 0.57
SF3B2-212ENST00000531589 CAMTA1Q9Y6Y1 1673 aa18.6■□□□□ 0.57
SF3B2-212ENST00000531589 SLC24A1O60721 1099 aa18.59■□□□□ 0.57
SF3B2-212ENST00000531589 TCP11L2Q8N4U5 519 aa18.59■□□□□ 0.57
SF3B2-212ENST00000531589 THSD7AQ9UPZ6 1657 aa18.59■□□□□ 0.57
SF3B2-212ENST00000531589 AATKQ6ZMQ8 1374 aa18.58■□□□□ 0.57
SF3B2-212ENST00000531589 KTN1Q86UP2 1357 aaKnown RBP18.58■□□□□ 0.57
SF3B2-212ENST00000531589 ZBTB7CA1YPR0 619 aa18.58■□□□□ 0.56
SF3B2-212ENST00000531589 PDE3BQ13370 1112 aa18.58■□□□□ 0.56
SF3B2-212ENST00000531589 FAM196AQ6ZSG2 479 aa18.58■□□□□ 0.56
SF3B2-212ENST00000531589 CPSF1Q10570 1443 aaKnown RBP18.57■□□□□ 0.56
SF3B2-212ENST00000531589 SLIT3O75094 1523 aa18.57■□□□□ 0.56
SF3B2-212ENST00000531589 LMO7Q8WWI1 1683 aa18.57■□□□□ 0.56
SF3B2-212ENST00000531589 FAM182BQ5T319 152 aa18.56■□□□□ 0.56
SF3B2-212ENST00000531589 PUS7Q96PZ0 661 aaKnown RBP18.56■□□□□ 0.56
SF3B2-212ENST00000531589 COL5A2P05997 1499 aaPredicted RBP18.56■□□□□ 0.56
SF3B2-212ENST00000531589 HDGFL2Q7Z4V5 671 aaPredicted RBP18.55■□□□□ 0.56
SF3B2-212ENST00000531589 TMC1Q8TDI8 760 aa18.55■□□□□ 0.56
SF3B2-212ENST00000531589 CRB1P82279 1406 aa18.55■□□□□ 0.56
SF3B2-212ENST00000531589 PIK3C2AO00443 1686 aa18.54■□□□□ 0.56
SF3B2-212ENST00000531589 C11orf95C9JLR9 678 aaPredicted RBP18.53■□□□□ 0.56
SF3B2-212ENST00000531589 TOM1L2Q6ZVM7 507 aa18.53■□□□□ 0.56
SF3B2-212ENST00000531589 ARHGEF25Q86VW2 580 aa18.53■□□□□ 0.56
SF3B2-212ENST00000531589 TERF2IPQ9NYB0 399 aa18.53■□□□□ 0.56
SF3B2-212ENST00000531589 AKAP12Q02952 1782 aa18.53■□□□□ 0.56
SF3B2-212ENST00000531589 RGPD1P0DJD0 1748 aa18.51■□□□□ 0.55
SF3B2-212ENST00000531589 SOX12O15370 315 aa18.5■□□□□ 0.55
SF3B2-212ENST00000531589 EN1Q05925 392 aaPredicted RBP18.5■□□□□ 0.55
SF3B2-212ENST00000531589 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.5■□□□□ 0.55
SF3B2-212ENST00000531589 WDR17Q8IZU2 1322 aa18.49■□□□□ 0.55
SF3B2-212ENST00000531589 ST20-MTHFSA0A0A6YYL1 179 aa18.49■□□□□ 0.55
SF3B2-212ENST00000531589 TRIM37O94972 964 aa18.49■□□□□ 0.55
SF3B2-212ENST00000531589 CDCA7Q9BWT1 371 aaPredicted RBP18.49■□□□□ 0.55
SF3B2-212ENST00000531589 SLC12A5Q9H2X9 1139 aa18.49■□□□□ 0.55
SF3B2-212ENST00000531589 USP31Q70CQ4 1352 aa18.49■□□□□ 0.55
SF3B2-212ENST00000531589 DISP2A7MBM2 1401 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms