RNA–Protein interactions for RNA: ENST00000531502.5

CTSB-221, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-221ENST00000531502 STAC3Q96MF2 364 aa21.18■□□□□ 0.98
CTSB-221ENST00000531502 FAM98CQ17RN3 349 aaKnown RBP21.17■□□□□ 0.98
CTSB-221ENST00000531502 ARHGEF28Q8N1W1 1705 aaKnown RBP21.17■□□□□ 0.98
CTSB-221ENST00000531502 ATP7BP35670 1465 aa21.15■□□□□ 0.98
CTSB-221ENST00000531502 SPATA31A5Q5VU36 1347 aa21.14■□□□□ 0.97
CTSB-221ENST00000531502 SPATA31A7Q8IWB4 1347 aa21.14■□□□□ 0.97
CTSB-221ENST00000531502 NGDNQ8NEJ9 315 aaKnown RBP21.14■□□□□ 0.97
CTSB-221ENST00000531502 ITSN1Q15811 1721 aa21.12■□□□□ 0.97
CTSB-221ENST00000531502 THSD7AQ9UPZ6 1657 aa21.12■□□□□ 0.97
CTSB-221ENST00000531502 HRCP23327 699 aa21.12■□□□□ 0.97
CTSB-221ENST00000531502 A0A0G2JS52 829 aa21.11■□□□□ 0.97
CTSB-221ENST00000531502 MYT1Q01538 1121 aa21.11■□□□□ 0.97
CTSB-221ENST00000531502 NUDT16Q96DE0 195 aaKnown RBP21.11■□□□□ 0.97
CTSB-221ENST00000531502 LRP5O75197 1615 aa21.11■□□□□ 0.97
CTSB-221ENST00000531502 PAK3O75914 559 aaPredicted RBP21.1■□□□□ 0.97
CTSB-221ENST00000531502 BAG6P46379 1132 aa21.1■□□□□ 0.97
CTSB-221ENST00000531502 PRDM11Q9NQV5 511 aa21.09■□□□□ 0.97
CTSB-221ENST00000531502 PHRF1Q9P1Y6 1649 aaKnown RBP21.08■□□□□ 0.97
CTSB-221ENST00000531502 RGPD1P0DJD0 1748 aa21.08■□□□□ 0.97
CTSB-221ENST00000531502 FAM182BQ5T319 152 aa21.08■□□□□ 0.97
CTSB-221ENST00000531502 KIAA0232Q92628 1395 aa21.08■□□□□ 0.96
CTSB-221ENST00000531502 CDK19Q9BWU1 502 aa21.07■□□□□ 0.96
CTSB-221ENST00000531502 TOPAZ1Q8N9V7 1692 aa21.07■□□□□ 0.96
CTSB-221ENST00000531502 POLR3AO14802 1390 aaPredicted RBP21.07■□□□□ 0.96
CTSB-221ENST00000531502 SPATA31A1Q5TZJ5 1347 aa21.05■□□□□ 0.96
CTSB-221ENST00000531502 DISP2A7MBM2 1401 aa21.05■□□□□ 0.96
CTSB-221ENST00000531502 TNS1Q9HBL0 1735 aaKnown RBP21.05■□□□□ 0.96
CTSB-221ENST00000531502 EN1Q05925 392 aaPredicted RBP21.05■□□□□ 0.96
CTSB-221ENST00000531502 CHRNA2Q15822 529 aa21.05■□□□□ 0.96
CTSB-221ENST00000531502 PSDA5PKW4 1024 aaPredicted RBP21.04■□□□□ 0.96
CTSB-221ENST00000531502 KIAA1210Q9ULL0 1709 aa21.04■□□□□ 0.96
CTSB-221ENST00000531502 PLEKHG3A1L390 1219 aa21.03■□□□□ 0.96
CTSB-221ENST00000531502 NBPF8Q3BBV2 869 aa21.03■□□□□ 0.96
CTSB-221ENST00000531502 ACEP12821 1306 aa21.03■□□□□ 0.96
CTSB-221ENST00000531502 NUTM2GQ5VZR2 741 aa21.02■□□□□ 0.96
CTSB-221ENST00000531502 CCDC61Q9Y6R9 512 aa21.02■□□□□ 0.96
CTSB-221ENST00000531502 ZC3H6P61129 1189 aaKnown RBP21.01■□□□□ 0.95
CTSB-221ENST00000531502 NRKQ7Z2Y5 1582 aa20.99■□□□□ 0.95
CTSB-221ENST00000531502 NBPF1Q3BBV0 1214 aa20.99■□□□□ 0.95
CTSB-221ENST00000531502 STRN4Q9NRL3 753 aa20.99■□□□□ 0.95
CTSB-221ENST00000531502 LMO7Q8WWI1 1683 aa20.98■□□□□ 0.95
CTSB-221ENST00000531502 CAMTA1Q9Y6Y1 1673 aa20.98■□□□□ 0.95
CTSB-221ENST00000531502 SSH2Q76I76 1423 aa20.97■□□□□ 0.95
CTSB-221ENST00000531502 EZH2Q15910 746 aaKnown RBP20.97■□□□□ 0.95
CTSB-221ENST00000531502 FAM196AQ6ZSG2 479 aa20.97■□□□□ 0.95
CTSB-221ENST00000531502 CAMKK2Q96RR4 588 aa20.97■□□□□ 0.95
CTSB-221ENST00000531502 USP19O94966 1318 aa20.97■□□□□ 0.95
CTSB-221ENST00000531502 CPDO75976 1380 aa20.97■□□□□ 0.95
CTSB-221ENST00000531502 BARGINQ6ZT62 677 aa20.96■□□□□ 0.95
CTSB-221ENST00000531502 TRIM37O94972 964 aa20.95■□□□□ 0.94
CTSB-221ENST00000531502 ABTB2Q8N961 1025 aa20.95■□□□□ 0.94
CTSB-221ENST00000531502 R3HDM1Q15032 1099 aaKnown RBP20.94■□□□□ 0.94
CTSB-221ENST00000531502 USP35Q9P2H5 1018 aa20.94■□□□□ 0.94
CTSB-221ENST00000531502 LARP1Q6PKG0 1096 aaKnown RBP20.93■□□□□ 0.94
CTSB-221ENST00000531502 EVA1CP58658 441 aa20.92■□□□□ 0.94
CTSB-221ENST00000531502 PPIP5K1Q6PFW1 1433 aa20.92■□□□□ 0.94
CTSB-221ENST00000531502 PARD3Q8TEW0 1356 aa20.9■□□□□ 0.94
CTSB-221ENST00000531502 CENPJQ9HC77 1338 aaPredicted RBP20.9■□□□□ 0.94
CTSB-221ENST00000531502 GCP02774 474 aa20.9■□□□□ 0.94
CTSB-221ENST00000531502 TCP11L2Q8N4U5 519 aa20.9■□□□□ 0.94
CTSB-221ENST00000531502 RREB1Q92766 1687 aa20.89■□□□□ 0.94
CTSB-221ENST00000531502 APBA3O96018 575 aa20.89■□□□□ 0.93
CTSB-221ENST00000531502 SRPK2P78362 688 aaKnown RBP20.89■□□□□ 0.93
CTSB-221ENST00000531502 NLRP13Q86W25 1043 aa20.89■□□□□ 0.93
CTSB-221ENST00000531502 CABP2Q9NPB3 220 aa20.89■□□□□ 0.93
CTSB-221ENST00000531502 COL5A2P05997 1499 aaPredicted RBP20.88■□□□□ 0.93
CTSB-221ENST00000531502 BRD4O60885 1362 aaPredicted RBP20.88■□□□□ 0.93
CTSB-221ENST00000531502 PDE3BQ13370 1112 aa20.88■□□□□ 0.93
CTSB-221ENST00000531502 QRICH2Q9H0J4 1663 aa20.87■□□□□ 0.93
CTSB-221ENST00000531502 THRAP3Q9Y2W1 955 aaKnown RBP20.87■□□□□ 0.93
CTSB-221ENST00000531502 PARP4Q9UKK3 1724 aaKnown RBP20.87■□□□□ 0.93
CTSB-221ENST00000531502 NUP188Q5SRE5 1749 aa20.86■□□□□ 0.93
CTSB-221ENST00000531502 USP6P35125 1406 aa20.85■□□□□ 0.93
CTSB-221ENST00000531502 SLIT3O75094 1523 aa20.84■□□□□ 0.93
CTSB-221ENST00000531502 CABP1Q9NZU7 370 aa20.84■□□□□ 0.93
CTSB-221ENST00000531502 PEAK1Q9H792 1746 aa20.82■□□□□ 0.92
CTSB-221ENST00000531502 CRB1P82279 1406 aa20.82■□□□□ 0.92
CTSB-221ENST00000531502 AATKQ6ZMQ8 1374 aa20.82■□□□□ 0.92
CTSB-221ENST00000531502 COL18A1P39060 1754 aa20.82■□□□□ 0.92
CTSB-221ENST00000531502 PIK3C2AO00443 1686 aa20.8■□□□□ 0.92
CTSB-221ENST00000531502 NLRP6P59044 892 aa20.8■□□□□ 0.92
CTSB-221ENST00000531502 L3MBTL2Q969R5 705 aa20.8■□□□□ 0.92
CTSB-221ENST00000531502 LRRC37A3O60309 1634 aa20.78■□□□□ 0.92
CTSB-221ENST00000531502 SBF2Q86WG5 1849 aa20.77■□□□□ 0.92
CTSB-221ENST00000531502 TRPM1Q7Z4N2 1603 aa20.77■□□□□ 0.92
CTSB-221ENST00000531502 OVOS2A0A0G2JMS6 1433 aa20.77■□□□□ 0.91
CTSB-221ENST00000531502 OVOS2A0A0J9YW53 1432 aa20.77■□□□□ 0.91
CTSB-221ENST00000531502 OVOS2Q6IE36 1432 aa20.77■□□□□ 0.91
CTSB-221ENST00000531502 C11orf95C9JLR9 678 aaPredicted RBP20.76■□□□□ 0.91
CTSB-221ENST00000531502 AXIN2Q9Y2T1 843 aa20.76■□□□□ 0.91
CTSB-221ENST00000531502 ZBTB7CA1YPR0 619 aa20.75■□□□□ 0.91
CTSB-221ENST00000531502 NBPF14Q5TI25 921 aa20.75■□□□□ 0.91
CTSB-221ENST00000531502 EVC2Q86UK5 1308 aa20.75■□□□□ 0.91
CTSB-221ENST00000531502 RGPD3A6NKT7 1758 aaPredicted RBP20.74■□□□□ 0.91
CTSB-221ENST00000531502 RGPD4Q7Z3J3 1758 aa20.74■□□□□ 0.91
CTSB-221ENST00000531502 WNK3Q9BYP7 1800 aa20.74■□□□□ 0.91
CTSB-221ENST00000531502 AKAP12Q02952 1782 aa20.74■□□□□ 0.91
CTSB-221ENST00000531502 CPSF1Q10570 1443 aaKnown RBP20.73■□□□□ 0.91
CTSB-221ENST00000531502 TOM1L2Q6ZVM7 507 aa20.73■□□□□ 0.91
CTSB-221ENST00000531502 ARHGEF25Q86VW2 580 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms