RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 SLC24A1O60721 1099 aa13.3□□□□□ -0.28
CHKA-205ENST00000530730 SKOR1P84550 965 aa13.3□□□□□ -0.28
CHKA-205ENST00000530730 CTC1Q2NKJ3 1217 aa13.3□□□□□ -0.28
CHKA-205ENST00000530730 TUSC1Q2TAM9 212 aa13.3□□□□□ -0.28
CHKA-205ENST00000530730 EVA1BQ9NVM1 165 aa13.3□□□□□ -0.28
CHKA-205ENST00000530730 TTC24A2A3L6 582 aaPredicted RBP13.29□□□□□ -0.28
CHKA-205ENST00000530730 SMCPP49901 116 aaPredicted RBP13.29□□□□□ -0.28
CHKA-205ENST00000530730 PTCRAQ6ISU1 281 aaPredicted RBP13.29□□□□□ -0.28
CHKA-205ENST00000530730 RC3H1Q5TC82 1133 aaKnown RBP13.28□□□□□ -0.28
CHKA-205ENST00000530730 RIC3Q7Z5B4 369 aa13.28□□□□□ -0.28
CHKA-205ENST00000530730 ZBTB3Q9H5J0 574 aa13.28□□□□□ -0.28
CHKA-205ENST00000530730 PCDHB15Q9Y5E8 787 aa13.27□□□□□ -0.29
CHKA-205ENST00000530730 TOP2AP11388 1531 aaKnown RBP13.27□□□□□ -0.29
CHKA-205ENST00000530730 SMPD1P17405 629 aa13.26□□□□□ -0.29
CHKA-205ENST00000530730 HRCP23327 699 aa13.25□□□□□ -0.29
CHKA-205ENST00000530730 MYSM1Q5VVJ2 828 aa13.25□□□□□ -0.29
CHKA-205ENST00000530730 ST8SIA5O15466 376 aa13.24□□□□□ -0.29
CHKA-205ENST00000530730 KCNH2Q12809 1159 aa13.24□□□□□ -0.29
CHKA-205ENST00000530730 LYPD8Q6UX82 237 aa13.24□□□□□ -0.29
CHKA-205ENST00000530730 UNC93B1Q9H1C4 597 aa13.23□□□□□ -0.29
CHKA-205ENST00000530730 URB2Q14146 1524 aaKnown RBP13.23□□□□□ -0.29
CHKA-205ENST00000530730 AXIN1O15169 862 aa13.22□□□□□ -0.29
CHKA-205ENST00000530730 CFAP99D6REC4 459 aa13.21□□□□□ -0.29
CHKA-205ENST00000530730 RSPH6AQ9H0K4 717 aa13.2□□□□□ -0.3
CHKA-205ENST00000530730 LIMD1Q9UGP4 676 aa13.2□□□□□ -0.3
CHKA-205ENST00000530730 CCDC88BA6NC98 1476 aa13.19□□□□□ -0.3
CHKA-205ENST00000530730 J3QL48 77 aa13.19□□□□□ -0.3
CHKA-205ENST00000530730 SIAH2O43255 324 aa13.19□□□□□ -0.3
CHKA-205ENST00000530730 SH3BP2P78314 561 aa13.19□□□□□ -0.3
CHKA-205ENST00000530730 LILRB3O75022 631 aa13.18□□□□□ -0.3
CHKA-205ENST00000530730 EHBP1Q8NDI1 1231 aa13.18□□□□□ -0.3
CHKA-205ENST00000530730 F12P00748 615 aaPredicted RBP13.17□□□□□ -0.3
CHKA-205ENST00000530730 POTECB2RU33 542 aa13.16□□□□□ -0.3
CHKA-205ENST00000530730 CABLES1Q8TDN4 633 aa13.16□□□□□ -0.3
CHKA-205ENST00000530730 CLK2P49760 499 aaKnown RBP13.15□□□□□ -0.3
CHKA-205ENST00000530730 ZNF511Q8NB15 262 aa13.15□□□□□ -0.3
CHKA-205ENST00000530730 QPCTQ16769 361 aa13.14□□□□□ -0.31
CHKA-205ENST00000530730 MPNDQ8N594 471 aa13.14□□□□□ -0.31
CHKA-205ENST00000530730 BAP1Q92560 729 aa13.14□□□□□ -0.31
CHKA-205ENST00000530730 DACH1Q9UI36 760 aa13.13□□□□□ -0.31
CHKA-205ENST00000530730 VARSP26640 1264 aaKnown RBP13.12□□□□□ -0.31
CHKA-205ENST00000530730 CSPP1Q1MSJ5 1256 aa13.12□□□□□ -0.31
CHKA-205ENST00000530730 HPS1Q92902 700 aa13.12□□□□□ -0.31
CHKA-205ENST00000530730 NUTM2BA6NNL0 878 aaPredicted RBP13.11□□□□□ -0.31
CHKA-205ENST00000530730 NUTM2EB1AL46 878 aaPredicted RBP13.11□□□□□ -0.31
CHKA-205ENST00000530730 ALDH1A1P00352 501 aa13.11□□□□□ -0.31
CHKA-205ENST00000530730 CTHP32929 405 aa13.11□□□□□ -0.31
CHKA-205ENST00000530730 NUTM2DQ5VT03 806 aaPredicted RBP13.11□□□□□ -0.31
CHKA-205ENST00000530730 NUTM2AQ8IVF1 878 aaPredicted RBP13.11□□□□□ -0.31
CHKA-205ENST00000530730 ZNF775Q96BV0 537 aaPredicted RBP13.11□□□□□ -0.31
CHKA-205ENST00000530730 LINC01559Q495D7 138 aa13.1□□□□□ -0.31
CHKA-205ENST00000530730 ZNF608Q9ULD9 1512 aaPredicted RBP13.09□□□□□ -0.31
CHKA-205ENST00000530730 DDRGK1Q96HY6 314 aa13.09□□□□□ -0.31
CHKA-205ENST00000530730 KDM4CQ9H3R0 1056 aa13.09□□□□□ -0.31
CHKA-205ENST00000530730 HELBQ8NG08 1087 aaPredicted RBP13.08□□□□□ -0.32
CHKA-205ENST00000530730 MAP10Q9P2G4 905 aa13.08□□□□□ -0.32
CHKA-205ENST00000530730 IFT140Q96RY7 1462 aa13.08□□□□□ -0.32
CHKA-205ENST00000530730 PER1O15534 1290 aaPredicted RBP13.07□□□□□ -0.32
CHKA-205ENST00000530730 ATP13A2Q9NQ11 1180 aa13.07□□□□□ -0.32
CHKA-205ENST00000530730 GMPR2Q9P2T1 348 aaKnown RBP13.07□□□□□ -0.32
CHKA-205ENST00000530730 TOPBP1Q92547 1522 aa13.07□□□□□ -0.32
CHKA-205ENST00000530730 PLEKHG3A1L390 1219 aa13.06□□□□□ -0.32
CHKA-205ENST00000530730 SKIV2LQ15477 1246 aaKnown RBP13.06□□□□□ -0.32
CHKA-205ENST00000530730 SH3D19Q5HYK7 790 aa13.06□□□□□ -0.32
CHKA-205ENST00000530730 RTL5Q5HYW3 569 aaPredicted RBP13.06□□□□□ -0.32
CHKA-205ENST00000530730 WASF2Q9Y6W5 498 aa13.05□□□□□ -0.32
CHKA-205ENST00000530730 ARMC2Q8NEN0 867 aa13.04□□□□□ -0.32
CHKA-205ENST00000530730 GPBP1L1Q9HC44 474 aaPredicted RBP13.04□□□□□ -0.32
CHKA-205ENST00000530730 POLR3EQ9NVU0 708 aa13.04□□□□□ -0.32
CHKA-205ENST00000530730 ABCC8Q09428 1581 aa13.03□□□□□ -0.32
CHKA-205ENST00000530730 SENP2Q9HC62 589 aa13.03□□□□□ -0.32
CHKA-205ENST00000530730 PRDM2Q13029 1718 aa13.02□□□□□ -0.32
CHKA-205ENST00000530730 C11orf95C9JLR9 678 aaPredicted RBP13.02□□□□□ -0.33
CHKA-205ENST00000530730 FAM174AQ8TBP5 190 aa13.02□□□□□ -0.33
CHKA-205ENST00000530730 TSC1Q92574 1164 aa13.01□□□□□ -0.33
CHKA-205ENST00000530730 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.01□□□□□ -0.33
CHKA-205ENST00000530730 FAM117AQ9C073 453 aa13.01□□□□□ -0.33
CHKA-205ENST00000530730 TLL2Q9Y6L7 1015 aa13.01□□□□□ -0.33
CHKA-205ENST00000530730 PPP2R2DQ66LE6 453 aa13□□□□□ -0.33
CHKA-205ENST00000530730 TRIM47Q96LD4 638 aa13□□□□□ -0.33
CHKA-205ENST00000530730 CDK15Q96Q40 435 aa13□□□□□ -0.33
CHKA-205ENST00000530730 AQRO60306 1485 aaKnown RBP eCLIP12.99□□□□□ -0.335e-8■□□□□ 10.4
CHKA-205ENST00000530730 BPHLQ86WA6 291 aaPredicted RBP12.99□□□□□ -0.33
CHKA-205ENST00000530730 KIFC2Q96AC6 838 aa12.99□□□□□ -0.33
CHKA-205ENST00000530730 NBPF14Q5TI25 921 aa12.98□□□□□ -0.33
CHKA-205ENST00000530730 GPKOWQ92917 476 aaPredicted RBP eCLIP12.98□□□□□ -0.33
CHKA-205ENST00000530730 FOXJ1Q92949 421 aa12.98□□□□□ -0.33
CHKA-205ENST00000530730 DNMBPQ6XZF7 1577 aa12.98□□□□□ -0.33
CHKA-205ENST00000530730 CAPN5O15484 640 aaPredicted RBP12.96□□□□□ -0.33
CHKA-205ENST00000530730 ADH1CP00326 375 aa12.96□□□□□ -0.33
CHKA-205ENST00000530730 SH3RF1Q7Z6J0 888 aa12.96□□□□□ -0.33
CHKA-205ENST00000530730 RIMBP3CA6NJZ7 1639 aa12.95□□□□□ -0.34
CHKA-205ENST00000530730 RIMBP3BA6NNM3 1639 aa12.95□□□□□ -0.34
CHKA-205ENST00000530730 RIMBP3Q9UFD9 1639 aa12.95□□□□□ -0.34
CHKA-205ENST00000530730 C4orf48Q5BLP8 95 aa12.95□□□□□ -0.34
CHKA-205ENST00000530730 C1QTNF2Q9BXJ5 285 aa12.95□□□□□ -0.34
CHKA-205ENST00000530730 NNTQ13423 1086 aa12.94□□□□□ -0.34
CHKA-205ENST00000530730 LCE2AQ5TA79 106 aaPredicted RBP12.94□□□□□ -0.34
CHKA-205ENST00000530730 CYB5RLQ6IPT4 315 aa12.94□□□□□ -0.34
CHKA-205ENST00000530730 POLA1P09884 1462 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms