RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 HRCP23327 699 aa21.9■■□□□ 1.1
CAPN1-219ENST00000530495 FAM98CQ17RN3 349 aaKnown RBP21.88■■□□□ 1.09
CAPN1-219ENST00000530495 NGDNQ8NEJ9 315 aaKnown RBP21.88■■□□□ 1.09
CAPN1-219ENST00000530495 CRYBG1Q9Y4K1 1723 aa21.86■■□□□ 1.09
CAPN1-219ENST00000530495 A0A0G2JS52 829 aa21.85■■□□□ 1.09
CAPN1-219ENST00000530495 PAK3O75914 559 aaPredicted RBP21.85■■□□□ 1.09
CAPN1-219ENST00000530495 MYT1Q01538 1121 aa21.85■■□□□ 1.09
CAPN1-219ENST00000530495 SPATA31A5Q5VU36 1347 aa21.84■■□□□ 1.09
CAPN1-219ENST00000530495 SPATA31A7Q8IWB4 1347 aa21.84■■□□□ 1.09
CAPN1-219ENST00000530495 ARHGEF28Q8N1W1 1705 aaKnown RBP21.84■■□□□ 1.09
CAPN1-219ENST00000530495 NUDT16Q96DE0 195 aaKnown RBP21.84■■□□□ 1.09
CAPN1-219ENST00000530495 ITSN1Q15811 1721 aa21.83■■□□□ 1.08
CAPN1-219ENST00000530495 BAG6P46379 1132 aa21.81■■□□□ 1.08
CAPN1-219ENST00000530495 PRDM11Q9NQV5 511 aa21.81■■□□□ 1.08
CAPN1-219ENST00000530495 ATP7BP35670 1465 aa21.81■■□□□ 1.08
CAPN1-219ENST00000530495 CDK19Q9BWU1 502 aa21.8■■□□□ 1.08
CAPN1-219ENST00000530495 THSD7AQ9UPZ6 1657 aa21.77■■□□□ 1.08
CAPN1-219ENST00000530495 KIAA0232Q92628 1395 aa21.76■■□□□ 1.07
CAPN1-219ENST00000530495 RGPD1P0DJD0 1748 aa21.76■■□□□ 1.07
CAPN1-219ENST00000530495 FAM182BQ5T319 152 aa21.76■■□□□ 1.07
CAPN1-219ENST00000530495 CCDC61Q9Y6R9 512 aa21.76■■□□□ 1.07
CAPN1-219ENST00000530495 SPATA31A1Q5TZJ5 1347 aa21.76■■□□□ 1.07
CAPN1-219ENST00000530495 POLR3AO14802 1390 aaPredicted RBP21.75■■□□□ 1.07
CAPN1-219ENST00000530495 PLEKHG3A1L390 1219 aa21.75■■□□□ 1.07
CAPN1-219ENST00000530495 NBPF8Q3BBV2 869 aa21.75■■□□□ 1.07
CAPN1-219ENST00000530495 LRP5O75197 1615 aa21.75■■□□□ 1.07
CAPN1-219ENST00000530495 ACEP12821 1306 aa21.75■■□□□ 1.07
CAPN1-219ENST00000530495 KIAA1210Q9ULL0 1709 aa21.75■■□□□ 1.07
CAPN1-219ENST00000530495 PHRF1Q9P1Y6 1649 aaKnown RBP21.74■■□□□ 1.07
CAPN1-219ENST00000530495 EN1Q05925 392 aaPredicted RBP21.74■■□□□ 1.07
CAPN1-219ENST00000530495 CHRNA2Q15822 529 aa21.74■■□□□ 1.07
CAPN1-219ENST00000530495 TOPAZ1Q8N9V7 1692 aa21.73■■□□□ 1.07
CAPN1-219ENST00000530495 ZC3H6P61129 1189 aaKnown RBP21.73■■□□□ 1.07
CAPN1-219ENST00000530495 PSDA5PKW4 1024 aaPredicted RBP21.72■■□□□ 1.07
CAPN1-219ENST00000530495 NUTM2GQ5VZR2 741 aa21.72■■□□□ 1.07
CAPN1-219ENST00000530495 STRN4Q9NRL3 753 aa21.71■■□□□ 1.07
CAPN1-219ENST00000530495 DISP2A7MBM2 1401 aa21.71■■□□□ 1.07
CAPN1-219ENST00000530495 NBPF1Q3BBV0 1214 aa21.7■■□□□ 1.06
CAPN1-219ENST00000530495 TNS1Q9HBL0 1735 aaKnown RBP21.69■■□□□ 1.06
CAPN1-219ENST00000530495 FAM196AQ6ZSG2 479 aa21.69■■□□□ 1.06
CAPN1-219ENST00000530495 EVA1CP58658 441 aa21.68■■□□□ 1.06
CAPN1-219ENST00000530495 BARGINQ6ZT62 677 aa21.68■■□□□ 1.06
CAPN1-219ENST00000530495 ABTB2Q8N961 1025 aa21.68■■□□□ 1.06
CAPN1-219ENST00000530495 SSH2Q76I76 1423 aa21.65■■□□□ 1.06
CAPN1-219ENST00000530495 CPDO75976 1380 aa21.65■■□□□ 1.06
CAPN1-219ENST00000530495 TRIM37O94972 964 aa21.65■■□□□ 1.06
CAPN1-219ENST00000530495 EZH2Q15910 746 aaKnown RBP21.65■■□□□ 1.06
CAPN1-219ENST00000530495 CAMKK2Q96RR4 588 aa21.65■■□□□ 1.06
CAPN1-219ENST00000530495 USP35Q9P2H5 1018 aa21.65■■□□□ 1.06
CAPN1-219ENST00000530495 CAMTA1Q9Y6Y1 1673 aa21.65■■□□□ 1.06
CAPN1-219ENST00000530495 USP19O94966 1318 aa21.64■■□□□ 1.05
CAPN1-219ENST00000530495 NRKQ7Z2Y5 1582 aa21.64■■□□□ 1.05
CAPN1-219ENST00000530495 SRPK2P78362 688 aaKnown RBP21.63■■□□□ 1.05
CAPN1-219ENST00000530495 R3HDM1Q15032 1099 aaKnown RBP21.63■■□□□ 1.05
CAPN1-219ENST00000530495 LARP1Q6PKG0 1096 aaKnown RBP21.63■■□□□ 1.05
CAPN1-219ENST00000530495 NLRP13Q86W25 1043 aa21.63■■□□□ 1.05
CAPN1-219ENST00000530495 LMO7Q8WWI1 1683 aa21.63■■□□□ 1.05
CAPN1-219ENST00000530495 GCP02774 474 aa21.62■■□□□ 1.05
CAPN1-219ENST00000530495 PDE3BQ13370 1112 aa21.62■■□□□ 1.05
CAPN1-219ENST00000530495 PPIP5K1Q6PFW1 1433 aa21.62■■□□□ 1.05
CAPN1-219ENST00000530495 CENPJQ9HC77 1338 aaPredicted RBP21.61■■□□□ 1.05
CAPN1-219ENST00000530495 APBA3O96018 575 aa21.61■■□□□ 1.05
CAPN1-219ENST00000530495 TCP11L2Q8N4U5 519 aa21.61■■□□□ 1.05
CAPN1-219ENST00000530495 BRD4O60885 1362 aaPredicted RBP21.61■■□□□ 1.05
CAPN1-219ENST00000530495 CABP2Q9NPB3 220 aa21.6■■□□□ 1.05
CAPN1-219ENST00000530495 THRAP3Q9Y2W1 955 aaKnown RBP21.6■■□□□ 1.05
CAPN1-219ENST00000530495 PARD3Q8TEW0 1356 aa21.6■■□□□ 1.05
CAPN1-219ENST00000530495 CABP1Q9NZU7 370 aa21.56■■□□□ 1.04
CAPN1-219ENST00000530495 QRICH2Q9H0J4 1663 aa21.56■■□□□ 1.04
CAPN1-219ENST00000530495 COL5A2P05997 1499 aaPredicted RBP21.54■■□□□ 1.04
CAPN1-219ENST00000530495 USP6P35125 1406 aa21.54■■□□□ 1.04
CAPN1-219ENST00000530495 PARP4Q9UKK3 1724 aaKnown RBP21.53■■□□□ 1.04
CAPN1-219ENST00000530495 NLRP6P59044 892 aa21.53■■□□□ 1.04
CAPN1-219ENST00000530495 RREB1Q92766 1687 aa21.53■■□□□ 1.04
CAPN1-219ENST00000530495 AATKQ6ZMQ8 1374 aa21.52■■□□□ 1.04
CAPN1-219ENST00000530495 C11orf95C9JLR9 678 aaPredicted RBP21.52■■□□□ 1.04
CAPN1-219ENST00000530495 L3MBTL2Q969R5 705 aa21.52■■□□□ 1.04
CAPN1-219ENST00000530495 CRB1P82279 1406 aa21.52■■□□□ 1.04
CAPN1-219ENST00000530495 SLIT3O75094 1523 aa21.5■■□□□ 1.03
CAPN1-219ENST00000530495 NUP188Q5SRE5 1749 aa21.49■■□□□ 1.03
CAPN1-219ENST00000530495 NBPF14Q5TI25 921 aa21.49■■□□□ 1.03
CAPN1-219ENST00000530495 EVC2Q86UK5 1308 aa21.49■■□□□ 1.03
CAPN1-219ENST00000530495 COL18A1P39060 1754 aa21.47■■□□□ 1.03
CAPN1-219ENST00000530495 ZBTB7CA1YPR0 619 aa21.47■■□□□ 1.03
CAPN1-219ENST00000530495 ZNF692Q9BU19 519 aaPredicted RBP21.47■■□□□ 1.03
CAPN1-219ENST00000530495 PIK3C2AO00443 1686 aa21.46■■□□□ 1.03
CAPN1-219ENST00000530495 PEAK1Q9H792 1746 aa21.46■■□□□ 1.03
CAPN1-219ENST00000530495 TRPM1Q7Z4N2 1603 aa21.45■■□□□ 1.02
CAPN1-219ENST00000530495 AXIN2Q9Y2T1 843 aa21.45■■□□□ 1.02
CAPN1-219ENST00000530495 SBF2Q86WG5 1849 aa21.44■■□□□ 1.02
CAPN1-219ENST00000530495 TOM1L2Q6ZVM7 507 aa21.44■■□□□ 1.02
CAPN1-219ENST00000530495 OVOS2A0A0G2JMS6 1433 aa21.44■■□□□ 1.02
CAPN1-219ENST00000530495 OVOS2A0A0J9YW53 1432 aa21.44■■□□□ 1.02
CAPN1-219ENST00000530495 OVOS2Q6IE36 1432 aa21.44■■□□□ 1.02
CAPN1-219ENST00000530495 PLSCR1O15162 318 aa21.43■■□□□ 1.02
CAPN1-219ENST00000530495 DDB1Q16531 1140 aa21.43■■□□□ 1.02
CAPN1-219ENST00000530495 KCNH5Q8NCM2 988 aa21.43■■□□□ 1.02
CAPN1-219ENST00000530495 SIN3AQ96ST3 1273 aa21.43■■□□□ 1.02
CAPN1-219ENST00000530495 LRRC37A3O60309 1634 aa21.42■■□□□ 1.02
CAPN1-219ENST00000530495 TTC21BQ7Z4L5 1316 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms