RNA–Protein interactions for RNA: ENST00000530296.5

CTSB-217, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-217ENST00000530296 CENPJQ9HC77 1338 aaPredicted RBP19.92■□□□□ 0.78
CTSB-217ENST00000530296 ADGRB2O60241 1585 aa19.91■□□□□ 0.78
CTSB-217ENST00000530296 MINK1Q8N4C8 1332 aaPredicted RBP19.89■□□□□ 0.77
CTSB-217ENST00000530296 ABCA3Q99758 1704 aa19.88■□□□□ 0.77
CTSB-217ENST00000530296 BAG6P46379 1132 aa19.88■□□□□ 0.77
CTSB-217ENST00000530296 CABLES1Q8TDN4 633 aa19.88■□□□□ 0.77
CTSB-217ENST00000530296 SLC24A1O60721 1099 aa19.87■□□□□ 0.77
CTSB-217ENST00000530296 FAM83GA6ND36 823 aa19.86■□□□□ 0.77
CTSB-217ENST00000530296 WASLO00401 505 aaPredicted RBP19.86■□□□□ 0.77
CTSB-217ENST00000530296 A0A0G2JS52 829 aa19.85■□□□□ 0.77
CTSB-217ENST00000530296 MYT1Q01538 1121 aa19.85■□□□□ 0.77
CTSB-217ENST00000530296 DEFB132Q7Z7B7 95 aa19.85■□□□□ 0.77
CTSB-217ENST00000530296 HIRIP3Q9BW71 556 aaPredicted RBP19.85■□□□□ 0.77
CTSB-217ENST00000530296 PMFBP1Q8TBY8 1022 aa19.84■□□□□ 0.77
CTSB-217ENST00000530296 COL14A1Q05707 1796 aaKnown RBP19.83■□□□□ 0.77
CTSB-217ENST00000530296 BTG4Q9NY30 223 aa19.83■□□□□ 0.77
CTSB-217ENST00000530296 QRICH2Q9H0J4 1663 aa19.83■□□□□ 0.76
CTSB-217ENST00000530296 LRP5O75197 1615 aa19.83■□□□□ 0.76
CTSB-217ENST00000530296 SBNO2Q9Y2G9 1366 aa19.83■□□□□ 0.76
CTSB-217ENST00000530296 TRPM3Q9HCF6 1732 aaPredicted RBP19.82■□□□□ 0.76
CTSB-217ENST00000530296 TULP4Q9NRJ4 1543 aa19.81■□□□□ 0.76
CTSB-217ENST00000530296 EVC2Q86UK5 1308 aa19.81■□□□□ 0.76
CTSB-217ENST00000530296 ALS2Q96Q42 1657 aa19.81■□□□□ 0.76
CTSB-217ENST00000530296 NRAPQ86VF7 1730 aa19.8■□□□□ 0.76
CTSB-217ENST00000530296 FAM98CQ17RN3 349 aaKnown RBP19.8■□□□□ 0.76
CTSB-217ENST00000530296 CDK19Q9BWU1 502 aa19.8■□□□□ 0.76
CTSB-217ENST00000530296 PLEKHG5O94827 1062 aa19.79■□□□□ 0.76
CTSB-217ENST00000530296 NGDNQ8NEJ9 315 aaKnown RBP19.79■□□□□ 0.76
CTSB-217ENST00000530296 SRPK2P78362 688 aaKnown RBP19.78■□□□□ 0.76
CTSB-217ENST00000530296 USP47Q96K76 1375 aa19.78■□□□□ 0.76
CTSB-217ENST00000530296 SPATA31A5Q5VU36 1347 aa19.77■□□□□ 0.76
CTSB-217ENST00000530296 SPATA31A7Q8IWB4 1347 aa19.77■□□□□ 0.76
CTSB-217ENST00000530296 RGPD1P0DJD0 1748 aa19.77■□□□□ 0.76
CTSB-217ENST00000530296 ST20-MTHFSA0A0A6YYL1 179 aa19.75■□□□□ 0.75
CTSB-217ENST00000530296 NUDT16Q96DE0 195 aaKnown RBP19.75■□□□□ 0.75
CTSB-217ENST00000530296 PRDM11Q9NQV5 511 aa19.75■□□□□ 0.75
CTSB-217ENST00000530296 CCDC61Q9Y6R9 512 aa19.75■□□□□ 0.75
CTSB-217ENST00000530296 ITSN1Q15811 1721 aa19.75■□□□□ 0.75
CTSB-217ENST00000530296 DISP2A7MBM2 1401 aa19.75■□□□□ 0.75
CTSB-217ENST00000530296 PAK3O75914 559 aaPredicted RBP19.74■□□□□ 0.75
CTSB-217ENST00000530296 PRR36Q9H6K5 1346 aa19.74■□□□□ 0.75
CTSB-217ENST00000530296 ATP7BP35670 1465 aa19.73■□□□□ 0.75
CTSB-217ENST00000530296 PUS7Q96PZ0 661 aaKnown RBP19.72■□□□□ 0.75
CTSB-217ENST00000530296 THSD7AQ9UPZ6 1657 aa19.71■□□□□ 0.75
CTSB-217ENST00000530296 CRYBG1Q9Y4K1 1723 aa19.71■□□□□ 0.75
CTSB-217ENST00000530296 EIF4G2P78344 907 aaKnown RBP eCLIP19.71■□□□□ 0.75
CTSB-217ENST00000530296 CDCA8Q53HL2 280 aa19.7■□□□□ 0.74
CTSB-217ENST00000530296 FAM196AQ6ZSG2 479 aa19.7■□□□□ 0.74
CTSB-217ENST00000530296 CABP2Q9NPB3 220 aa19.7■□□□□ 0.74
CTSB-217ENST00000530296 PARD3Q8TEW0 1356 aa19.7■□□□□ 0.74
CTSB-217ENST00000530296 TMF1P82094 1093 aa19.69■□□□□ 0.74
CTSB-217ENST00000530296 EN1Q05925 392 aaPredicted RBP19.69■□□□□ 0.74
CTSB-217ENST00000530296 TESK2Q96S53 571 aa19.69■□□□□ 0.74
CTSB-217ENST00000530296 SPATA31A1Q5TZJ5 1347 aa19.69■□□□□ 0.74
CTSB-217ENST00000530296 PLEKHG3A1L390 1219 aa19.68■□□□□ 0.74
CTSB-217ENST00000530296 PSDA5PKW4 1024 aaPredicted RBP19.67■□□□□ 0.74
CTSB-217ENST00000530296 TOPAZ1Q8N9V7 1692 aa19.67■□□□□ 0.74
CTSB-217ENST00000530296 KIAA0232Q92628 1395 aa19.67■□□□□ 0.74
CTSB-217ENST00000530296 PPIP5K1Q6PFW1 1433 aa19.67■□□□□ 0.74
CTSB-217ENST00000530296 C11orf95C9JLR9 678 aaPredicted RBP19.66■□□□□ 0.74
CTSB-217ENST00000530296 BARGINQ6ZT62 677 aa19.65■□□□□ 0.74
CTSB-217ENST00000530296 POLR3AO14802 1390 aaPredicted RBP19.65■□□□□ 0.74
CTSB-217ENST00000530296 PHRF1Q9P1Y6 1649 aaKnown RBP19.64■□□□□ 0.73
CTSB-217ENST00000530296 TNS1Q9HBL0 1735 aaKnown RBP19.64■□□□□ 0.73
CTSB-217ENST00000530296 BRD4O60885 1362 aaPredicted RBP19.63■□□□□ 0.73
CTSB-217ENST00000530296 NINLQ9Y2I6 1382 aa19.63■□□□□ 0.73
CTSB-217ENST00000530296 EVA1CP58658 441 aa19.63■□□□□ 0.73
CTSB-217ENST00000530296 ACEP12821 1306 aa19.62■□□□□ 0.73
CTSB-217ENST00000530296 PDE3BQ13370 1112 aa19.62■□□□□ 0.73
CTSB-217ENST00000530296 R3HDM1Q15032 1099 aaKnown RBP19.62■□□□□ 0.73
CTSB-217ENST00000530296 FAM182BQ5T319 152 aa19.62■□□□□ 0.73
CTSB-217ENST00000530296 ZNF692Q9BU19 519 aaPredicted RBP19.62■□□□□ 0.73
CTSB-217ENST00000530296 STRN4Q9NRL3 753 aa19.62■□□□□ 0.73
CTSB-217ENST00000530296 CABP1Q9NZU7 370 aa19.62■□□□□ 0.73
CTSB-217ENST00000530296 THRAP3Q9Y2W1 955 aaKnown RBP19.62■□□□□ 0.73
CTSB-217ENST00000530296 HSPA5P11021 654 aaKnown RBP19.61■□□□□ 0.73
CTSB-217ENST00000530296 ZEB1P37275 1124 aaPredicted RBP19.61■□□□□ 0.73
CTSB-217ENST00000530296 CAMKK2Q96RR4 588 aa19.61■□□□□ 0.73
CTSB-217ENST00000530296 CPDO75976 1380 aa19.6■□□□□ 0.73
CTSB-217ENST00000530296 TRIM37O94972 964 aa19.6■□□□□ 0.73
CTSB-217ENST00000530296 ZC3H6P61129 1189 aaKnown RBP19.6■□□□□ 0.73
CTSB-217ENST00000530296 CHRNA2Q15822 529 aa19.6■□□□□ 0.73
CTSB-217ENST00000530296 EZH2Q15910 746 aaKnown RBP19.6■□□□□ 0.73
CTSB-217ENST00000530296 APBA3O96018 575 aa19.59■□□□□ 0.73
CTSB-217ENST00000530296 ABTB2Q8N961 1025 aa19.59■□□□□ 0.73
CTSB-217ENST00000530296 SSH2Q76I76 1423 aa19.59■□□□□ 0.73
CTSB-217ENST00000530296 NBPF14Q5TI25 921 aa19.58■□□□□ 0.72
CTSB-217ENST00000530296 NLRP13Q86W25 1043 aa19.58■□□□□ 0.72
CTSB-217ENST00000530296 TCP11L2Q8N4U5 519 aa19.58■□□□□ 0.72
CTSB-217ENST00000530296 TMC1Q8TDI8 760 aa19.58■□□□□ 0.72
CTSB-217ENST00000530296 TERF2IPQ9NYB0 399 aa19.58■□□□□ 0.72
CTSB-217ENST00000530296 HDGFL2Q7Z4V5 671 aaPredicted RBP19.57■□□□□ 0.72
CTSB-217ENST00000530296 USP19O94966 1318 aa19.56■□□□□ 0.72
CTSB-217ENST00000530296 USP35Q9P2H5 1018 aa19.55■□□□□ 0.72
CTSB-217ENST00000530296 NRKQ7Z2Y5 1582 aa19.54■□□□□ 0.72
CTSB-217ENST00000530296 USP6P35125 1406 aa19.54■□□□□ 0.72
CTSB-217ENST00000530296 NUTM2GQ5VZR2 741 aa19.54■□□□□ 0.72
CTSB-217ENST00000530296 CPSF1Q10570 1443 aaKnown RBP19.53■□□□□ 0.72
CTSB-217ENST00000530296 KTN1Q86UP2 1357 aaKnown RBP19.53■□□□□ 0.72
CTSB-217ENST00000530296 LMO7Q8WWI1 1683 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms