RNA–Protein interactions for RNA: ENST00000530279.5

C11orf54-208, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-208ENST00000530279 HLA-CQ95604 372 aa8.24□□□□□ -1.09
C11orf54-208ENST00000530279 PHOX2BQ99453 314 aa8.24□□□□□ -1.09
C11orf54-208ENST00000530279 UPP2O95045 317 aa8.23□□□□□ -1.09
C11orf54-208ENST00000530279 BMP2P12643 396 aa8.23□□□□□ -1.09
C11orf54-208ENST00000530279 CD46P15529 392 aa8.23□□□□□ -1.09
C11orf54-208ENST00000530279 USP46P62068 366 aa8.23□□□□□ -1.09
C11orf54-208ENST00000530279 PLA2G4EQ3MJ16 856 aa8.23□□□□□ -1.09
C11orf54-208ENST00000530279 RNFT1Q5M7Z0 435 aa8.23□□□□□ -1.09
C11orf54-208ENST00000530279 Q8N3U1 123 aa8.23□□□□□ -1.09
C11orf54-208ENST00000530279 NANOS1Q8WY41 292 aaKnown RBP8.23□□□□□ -1.09
C11orf54-208ENST00000530279 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.23□□□□□ -1.09
C11orf54-208ENST00000530279 ZIC2O95409 532 aaPredicted RBP8.22□□□□□ -1.09
C11orf54-208ENST00000530279 LINC01559Q495D7 138 aa8.22□□□□□ -1.09
C11orf54-208ENST00000530279 DNMT3LQ9UJW3 386 aa8.22□□□□□ -1.09
C11orf54-208ENST00000530279 KCNV2Q8TDN2 545 aa8.21□□□□□ -1.1
C11orf54-208ENST00000530279 BAP1Q92560 729 aa8.21□□□□□ -1.1
C11orf54-208ENST00000530279 ZFAND3Q9H8U3 227 aa8.21□□□□□ -1.1
C11orf54-208ENST00000530279 SOS2Q07890 1332 aaPredicted RBP8.21□□□□□ -1.1
C11orf54-208ENST00000530279 SYMPKQ92797 1274 aaKnown RBP8.2□□□□□ -1.1
C11orf54-208ENST00000530279 UNC93B1Q9H1C4 597 aa8.2□□□□□ -1.1
C11orf54-208ENST00000530279 CCNYL3P0C7X3 344 aa8.19□□□□□ -1.1
C11orf54-208ENST00000530279 ITPKCQ96DU7 683 aa8.19□□□□□ -1.1
C11orf54-208ENST00000530279 K7ELQ4 463 aaPredicted RBP8.18□□□□□ -1.1
C11orf54-208ENST00000530279 HOXA2O43364 376 aa8.18□□□□□ -1.1
C11orf54-208ENST00000530279 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.18□□□□□ -1.1
C11orf54-208ENST00000530279 RETREG3Q86VR2 466 aa8.18□□□□□ -1.1
C11orf54-208ENST00000530279 LINC00528Q8N1L1 170 aa8.18□□□□□ -1.1
C11orf54-208ENST00000530279 ZNF511Q8NB15 262 aa8.18□□□□□ -1.1
C11orf54-208ENST00000530279 GALNT6Q8NCL4 622 aa8.18□□□□□ -1.1
C11orf54-208ENST00000530279 CFAP44Q96MT7 982 aa8.18□□□□□ -1.1
C11orf54-208ENST00000530279 CCDC180Q9P1Z9 1646 aa8.18□□□□□ -1.1
C11orf54-208ENST00000530279 PTSQ03393 145 aa8.17□□□□□ -1.1
C11orf54-208ENST00000530279 DCAF5Q96JK2 942 aa8.17□□□□□ -1.1
C11orf54-208ENST00000530279 PROCP04070 461 aa8.16□□□□□ -1.1
C11orf54-208ENST00000530279 ITGB2P05107 769 aa8.16□□□□□ -1.1
C11orf54-208ENST00000530279 MS4A1P11836 297 aa8.16□□□□□ -1.1
C11orf54-208ENST00000530279 GUCA2AQ02747 115 aa8.16□□□□□ -1.1
C11orf54-208ENST00000530279 FAM174AQ8TBP5 190 aa8.16□□□□□ -1.1
C11orf54-208ENST00000530279 MAP3K10Q02779 954 aa8.15□□□□□ -1.1
C11orf54-208ENST00000530279 PAXIP1Q6ZW49 1069 aaPredicted RBP8.15□□□□□ -1.1
C11orf54-208ENST00000530279 CDK15Q96Q40 435 aa8.15□□□□□ -1.1
C11orf54-208ENST00000530279 EVA1BQ9NVM1 165 aa8.15□□□□□ -1.1
C11orf54-208ENST00000530279 PHF20L1A8MW92 1017 aa8.14□□□□□ -1.11
C11orf54-208ENST00000530279 LYPD4Q6UWN0 246 aa8.14□□□□□ -1.11
C11orf54-208ENST00000530279 MEIOBQ8N635 442 aa8.14□□□□□ -1.11
C11orf54-208ENST00000530279 SEMA3EO15041 775 aa8.13□□□□□ -1.11
C11orf54-208ENST00000530279 NR5A1Q13285 461 aa8.13□□□□□ -1.11
C11orf54-208ENST00000530279 ARID5BQ14865 1188 aa8.13□□□□□ -1.11
C11orf54-208ENST00000530279 RBM26Q5T8P6 1007 aaKnown RBP8.13□□□□□ -1.11
C11orf54-208ENST00000530279 VWA5B2Q8N398 1253 aa8.13□□□□□ -1.11
C11orf54-208ENST00000530279 CCDC155Q8N6L0 562 aa8.13□□□□□ -1.11
C11orf54-208ENST00000530279 SPTLC1O15269 473 aa8.12□□□□□ -1.11
C11orf54-208ENST00000530279 KCNH2Q12809 1159 aa8.12□□□□□ -1.11
C11orf54-208ENST00000530279 PTPRNQ16849 979 aa8.12□□□□□ -1.11
C11orf54-208ENST00000530279 SV2AQ7L0J3 742 aa8.12□□□□□ -1.11
C11orf54-208ENST00000530279 ENAMQ9NRM1 1142 aa8.12□□□□□ -1.11
C11orf54-208ENST00000530279 TTLL8A6PVC2 850 aa8.11□□□□□ -1.11
C11orf54-208ENST00000530279 GPR37O15354 613 aa8.11□□□□□ -1.11
C11orf54-208ENST00000530279 ADAMTS2O95450 1211 aa8.11□□□□□ -1.11
C11orf54-208ENST00000530279 CDC14CA4D256 554 aa8.1□□□□□ -1.11
C11orf54-208ENST00000530279 NR3C2P08235 984 aa8.1□□□□□ -1.11
C11orf54-208ENST00000530279 LCE3BQ5TA77 95 aa8.1□□□□□ -1.11
C11orf54-208ENST00000530279 TSEN34Q9BSV6 310 aaKnown RBP8.1□□□□□ -1.11
C11orf54-208ENST00000530279 CNTNAP5Q8WYK1 1306 aa8.09□□□□□ -1.11
C11orf54-208ENST00000530279 FIGNL2A6NMB9 653 aa8.09□□□□□ -1.11
C11orf54-208ENST00000530279 CELA2BP08218 269 aaPredicted RBP8.09□□□□□ -1.11
C11orf54-208ENST00000530279 ITGA6P23229 1130 aa8.08□□□□□ -1.12
C11orf54-208ENST00000530279 BEND7Q8N7W2 519 aaPredicted RBP8.08□□□□□ -1.12
C11orf54-208ENST00000530279 SLC35F4A4IF30 521 aa8.07□□□□□ -1.12
C11orf54-208ENST00000530279 SRSF11Q05519 484 aaKnown RBP8.07□□□□□ -1.12
C11orf54-208ENST00000530279 C6orf229H3BNL8 230 aa8.06□□□□□ -1.12
C11orf54-208ENST00000530279 GRM5P41594 1212 aa8.06□□□□□ -1.12
C11orf54-208ENST00000530279 BAG6P46379 1132 aa8.06□□□□□ -1.12
C11orf54-208ENST00000530279 PODNQ7Z5L7 613 aa8.05□□□□□ -1.12
C11orf54-208ENST00000530279 SMYD5Q6GMV2 418 aa8.04□□□□□ -1.12
C11orf54-208ENST00000530279 FOXJ1Q92949 421 aa8.03□□□□□ -1.12
C11orf54-208ENST00000530279 FURINP09958 794 aa8.02□□□□□ -1.13
C11orf54-208ENST00000530279 FDX1P10109 184 aa8.02□□□□□ -1.13
C11orf54-208ENST00000530279 SH3RF1Q7Z6J0 888 aa8.02□□□□□ -1.13
C11orf54-208ENST00000530279 NUTM1Q86Y26 1132 aa8.02□□□□□ -1.13
C11orf54-208ENST00000530279 KRTAP4-12Q9BQ66 201 aa8.02□□□□□ -1.13
C11orf54-208ENST00000530279 PCDHGC3Q9UN70 934 aa8.01□□□□□ -1.13
C11orf54-208ENST00000530279 BTBD11A6QL63 1104 aa7.99□□□□□ -1.13
C11orf54-208ENST00000530279 CTHP32929 405 aa7.99□□□□□ -1.13
C11orf54-208ENST00000530279 MDM2Q00987 491 aaPredicted RBP7.99□□□□□ -1.13
C11orf54-208ENST00000530279 P3H3Q8IVL6 736 aa7.99□□□□□ -1.13
C11orf54-208ENST00000530279 NEDD1Q8NHV4 660 aa7.99□□□□□ -1.13
C11orf54-208ENST00000530279 TESPA1A2RU30 521 aaPredicted RBP7.98□□□□□ -1.13
C11orf54-208ENST00000530279 PRR7Q8TB68 274 aa7.98□□□□□ -1.13
C11orf54-208ENST00000530279 EMILIN1Q9Y6C2 1016 aa7.98□□□□□ -1.13
C11orf54-208ENST00000530279 SPINT1O43278 529 aa7.97□□□□□ -1.13
C11orf54-208ENST00000530279 AGERQ15109 404 aa7.97□□□□□ -1.13
C11orf54-208ENST00000530279 DESI1Q6ICB0 168 aa7.97□□□□□ -1.13
C11orf54-208ENST00000530279 GAS6Q14393 721 aa7.96□□□□□ -1.14
C11orf54-208ENST00000530279 FSHRP23945 695 aa7.95□□□□□ -1.14
C11orf54-208ENST00000530279 PLCB2Q00722 1185 aa7.95□□□□□ -1.14
C11orf54-208ENST00000530279 C4orf48Q5BLP8 95 aa7.95□□□□□ -1.14
C11orf54-208ENST00000530279 KRTAP9-9Q9BYP9 154 aa7.95□□□□□ -1.14
C11orf54-208ENST00000530279 KRTAP9-4Q9BYQ2 154 aa7.95□□□□□ -1.14
C11orf54-208ENST00000530279 BCRP11274 1271 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms