RNA–Protein interactions for RNA: ENST00000529945.2

PDE4DIP-227, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-227ENST00000529945 DHX8Q14562 1220 aaKnown RBP14.99□□□□□ -0.01
PDE4DIP-227ENST00000529945 CCDC6Q16204 474 aa14.99□□□□□ -0.01
PDE4DIP-227ENST00000529945 GIGYF2Q6Y7W6 1299 aaKnown RBP14.99□□□□□ -0.01
PDE4DIP-227ENST00000529945 PLCD3Q8N3E9 789 aa14.98□□□□□ -0.01
PDE4DIP-227ENST00000529945 KIF7Q2M1P5 1343 aa14.98□□□□□ -0.01
PDE4DIP-227ENST00000529945 NFKBIBQ15653 356 aa14.98□□□□□ -0.01
PDE4DIP-227ENST00000529945 CCDC174Q6PII3 467 aa14.98□□□□□ -0.01
PDE4DIP-227ENST00000529945 WHAMMQ8TF30 809 aa14.98□□□□□ -0.01
PDE4DIP-227ENST00000529945 PAK3O75914 559 aaPredicted RBP14.97□□□□□ -0.01
PDE4DIP-227ENST00000529945 VPS37DQ86XT2 251 aa14.97□□□□□ -0.01
PDE4DIP-227ENST00000529945 PLEKHD1A6NEE1 506 aa14.97□□□□□ -0.01
PDE4DIP-227ENST00000529945 ABCC9O60706 1549 aa14.97□□□□□ -0.01
PDE4DIP-227ENST00000529945 XBP1P17861 261 aa14.97□□□□□ -0.01
PDE4DIP-227ENST00000529945 KCNH8Q96L42 1107 aa14.97□□□□□ -0.01
PDE4DIP-227ENST00000529945 RBM28Q9NW13 759 aaKnown RBP14.97□□□□□ -0.01
PDE4DIP-227ENST00000529945 GTF2F1P35269 517 aaKnown RBP eCLIP14.97□□□□□ -0.01
PDE4DIP-227ENST00000529945 CCDC27Q2M243 656 aa14.97□□□□□ -0.01
PDE4DIP-227ENST00000529945 CCDC148Q8NFR7 591 aa14.97□□□□□ -0.01
PDE4DIP-227ENST00000529945 CFAP58Q5T655 872 aa14.97□□□□□ -0.01
PDE4DIP-227ENST00000529945 CEP120Q8N960 986 aa14.96□□□□□ -0.01
PDE4DIP-227ENST00000529945 PAXIP1Q6ZW49 1069 aaPredicted RBP14.96□□□□□ -0.01
PDE4DIP-227ENST00000529945 FERP16591 822 aa14.96□□□□□ -0.01
PDE4DIP-227ENST00000529945 SPECC1LQ69YQ0 1117 aa14.96□□□□□ -0.01
PDE4DIP-227ENST00000529945 APBB1IPQ7Z5R6 666 aaPredicted RBP14.96□□□□□ -0.01
PDE4DIP-227ENST00000529945 TMCO4Q5TGY1 634 aa14.96□□□□□ -0.01
PDE4DIP-227ENST00000529945 CSB-PGBD3P0DP91 1061 aa14.96□□□□□ -0.02
PDE4DIP-227ENST00000529945 ZFYP08048 801 aaPredicted RBP14.95□□□□□ -0.02
PDE4DIP-227ENST00000529945 UBXN4Q92575 508 aa14.95□□□□□ -0.02
PDE4DIP-227ENST00000529945 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.95□□□□□ -0.02
PDE4DIP-227ENST00000529945 TRAK2O60296 914 aa14.95□□□□□ -0.02
PDE4DIP-227ENST00000529945 MCM3P25205 808 aa14.95□□□□□ -0.02
PDE4DIP-227ENST00000529945 TANGO6Q9C0B7 1094 aa14.95□□□□□ -0.02
PDE4DIP-227ENST00000529945 KRT18P05783 430 aaKnown RBP14.95□□□□□ -0.02
PDE4DIP-227ENST00000529945 PIP4K2AP48426 406 aaPredicted RBP14.95□□□□□ -0.02
PDE4DIP-227ENST00000529945 PDE1CQ14123 709 aaPredicted RBP14.95□□□□□ -0.02
PDE4DIP-227ENST00000529945 GBP7Q8N8V2 638 aaPredicted RBP14.95□□□□□ -0.02
PDE4DIP-227ENST00000529945 PSMD1Q99460 953 aa14.95□□□□□ -0.02
PDE4DIP-227ENST00000529945 RPUSD2Q8IZ73 545 aaKnown RBP14.94□□□□□ -0.02
PDE4DIP-227ENST00000529945 FBF1Q8TES7 1133 aa14.94□□□□□ -0.02
PDE4DIP-227ENST00000529945 CCNB3Q8WWL7 1395 aa14.94□□□□□ -0.02
PDE4DIP-227ENST00000529945 GBP3Q9H0R5 595 aa14.94□□□□□ -0.02
PDE4DIP-227ENST00000529945 GSTTP1A0A1W2PQM5 241 aa14.94□□□□□ -0.02
PDE4DIP-227ENST00000529945 ZMYND15Q9H091 742 aa14.94□□□□□ -0.02
PDE4DIP-227ENST00000529945 RFC1P35251 1148 aaPredicted RBP14.94□□□□□ -0.02
PDE4DIP-227ENST00000529945 NUP133Q8WUM0 1156 aa14.93□□□□□ -0.02
PDE4DIP-227ENST00000529945 SEPT8Q92599 483 aa14.93□□□□□ -0.02
PDE4DIP-227ENST00000529945 STIM1Q13586 685 aa14.93□□□□□ -0.02
PDE4DIP-227ENST00000529945 HSPA4P34932 840 aa14.93□□□□□ -0.02
PDE4DIP-227ENST00000529945 MPNDQ8N594 471 aa14.92□□□□□ -0.02
PDE4DIP-227ENST00000529945 TNIKQ9UKE5 1360 aa14.92□□□□□ -0.02
PDE4DIP-227ENST00000529945 SAFB2Q14151 953 aaKnown RBP eCLIP14.92□□□□□ -0.02
PDE4DIP-227ENST00000529945 CWC25Q9NXE8 425 aaPredicted RBP14.92□□□□□ -0.02
PDE4DIP-227ENST00000529945 KDM4AO75164 1064 aa14.92□□□□□ -0.02
PDE4DIP-227ENST00000529945 CCDC158Q5M9N0 1113 aa14.92□□□□□ -0.02
PDE4DIP-227ENST00000529945 RNF168Q8IYW5 571 aaPredicted RBP14.91□□□□□ -0.02
PDE4DIP-227ENST00000529945 CASQ1P31415 396 aa14.91□□□□□ -0.02
PDE4DIP-227ENST00000529945 MSL1Q68DK7 614 aa14.91□□□□□ -0.02
PDE4DIP-227ENST00000529945 UBE2Q2Q8WVN8 375 aa14.91□□□□□ -0.02
PDE4DIP-227ENST00000529945 COMMD10Q9Y6G5 202 aa14.91□□□□□ -0.02
PDE4DIP-227ENST00000529945 CTR9Q6PD62 1173 aa14.91□□□□□ -0.02
PDE4DIP-227ENST00000529945 DNAI2Q9GZS0 605 aa14.91□□□□□ -0.02
PDE4DIP-227ENST00000529945 CCDC192P0DO97 292 aa14.91□□□□□ -0.02
PDE4DIP-227ENST00000529945 CEP57Q86XR8 500 aa14.9□□□□□ -0.02
PDE4DIP-227ENST00000529945 TAF4BQ92750 862 aa14.9□□□□□ -0.02
PDE4DIP-227ENST00000529945 NAA25Q14CX7 972 aa14.9□□□□□ -0.02
PDE4DIP-227ENST00000529945 GOLIM4O00461 696 aa14.9□□□□□ -0.02
PDE4DIP-227ENST00000529945 RALYLQ86SE5 291 aaKnown RBP14.9□□□□□ -0.02
PDE4DIP-227ENST00000529945 MRVI1Q9Y6F6 885 aa14.9□□□□□ -0.02
PDE4DIP-227ENST00000529945 PDIA4P13667 645 aaKnown RBP14.89□□□□□ -0.03
PDE4DIP-227ENST00000529945 LMAN1P49257 510 aa14.89□□□□□ -0.03
PDE4DIP-227ENST00000529945 MBD3O95983 291 aa14.89□□□□□ -0.03
PDE4DIP-227ENST00000529945 CFAP65Q6ZU64 1925 aaKnown RBP14.89□□□□□ -0.03
PDE4DIP-227ENST00000529945 HOOK3Q86VS8 718 aa14.89□□□□□ -0.03
PDE4DIP-227ENST00000529945 RAB3IL1Q8TBN0 382 aa14.89□□□□□ -0.03
PDE4DIP-227ENST00000529945 DCAF11Q8TEB1 546 aa14.89□□□□□ -0.03
PDE4DIP-227ENST00000529945 EPB41L2O43491 1005 aaKnown RBP14.89□□□□□ -0.03
PDE4DIP-227ENST00000529945 MXRA7P84157 204 aa14.89□□□□□ -0.03
PDE4DIP-227ENST00000529945 CEBPZQ03701 1054 aaKnown RBP14.89□□□□□ -0.03
PDE4DIP-227ENST00000529945 SMC6Q96SB8 1091 aa14.89□□□□□ -0.03
PDE4DIP-227ENST00000529945 IKQ13123 557 aaPredicted RBP14.88□□□□□ -0.03
PDE4DIP-227ENST00000529945 TPD52P55327 224 aaPredicted RBP14.88□□□□□ -0.03
PDE4DIP-227ENST00000529945 HOMER2Q9NSB8 354 aa14.88□□□□□ -0.03
PDE4DIP-227ENST00000529945 CBFA2T2O43439 604 aa14.88□□□□□ -0.03
PDE4DIP-227ENST00000529945 ERCC3P19447 782 aa14.88□□□□□ -0.03
PDE4DIP-227ENST00000529945 SCLT1Q96NL6 688 aa14.88□□□□□ -0.03
PDE4DIP-227ENST00000529945 PSMC4P43686 418 aa14.88□□□□□ -0.03
PDE4DIP-227ENST00000529945 INTS3Q68E01 1043 aaKnown RBP14.88□□□□□ -0.03
PDE4DIP-227ENST00000529945 SPECC1Q5M775 1068 aa14.87□□□□□ -0.03
PDE4DIP-227ENST00000529945 HDGFL2Q7Z4V5 671 aaPredicted RBP14.87□□□□□ -0.03
PDE4DIP-227ENST00000529945 C10orf67Q8IYJ2 551 aa14.87□□□□□ -0.03
PDE4DIP-227ENST00000529945 DACH1Q9UI36 760 aa14.87□□□□□ -0.03
PDE4DIP-227ENST00000529945 IFIT2P09913 472 aaKnown RBP14.87□□□□□ -0.03
PDE4DIP-227ENST00000529945 SETD5Q9C0A6 1442 aa14.87□□□□□ -0.03
PDE4DIP-227ENST00000529945 ARHGAP29Q52LW3 1261 aa14.87□□□□□ -0.03
PDE4DIP-227ENST00000529945 CCDC178Q5BJE1 867 aa14.87□□□□□ -0.03
PDE4DIP-227ENST00000529945 FAM114A2Q9NRY5 505 aa14.87□□□□□ -0.03
PDE4DIP-227ENST00000529945 PRPF31Q8WWY3 499 aaKnown RBP14.87□□□□□ -0.03
PDE4DIP-227ENST00000529945 PPP4R3BQ5MIZ7 849 aa14.87□□□□□ -0.03
PDE4DIP-227ENST00000529945 MTMR7Q9Y216 660 aa14.87□□□□□ -0.03
PDE4DIP-227ENST00000529945 PPP1R9BQ96SB3 815 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms