RNA–Protein interactions for RNA: ENST00000529520.5

GPATCH4-214, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-214ENST00000529520 BTG4Q9NY30 223 aa11.94□□□□□ -0.5
GPATCH4-214ENST00000529520 CCDC9Q9Y3X0 531 aaKnown RBP11.94□□□□□ -0.5
GPATCH4-214ENST00000529520 TOPAZ1Q8N9V7 1692 aa11.94□□□□□ -0.5
GPATCH4-214ENST00000529520 GPRASP1Q5JY77 1395 aa11.93□□□□□ -0.5
GPATCH4-214ENST00000529520 COL14A1Q05707 1796 aaKnown RBP11.93□□□□□ -0.5
GPATCH4-214ENST00000529520 NUTM2GQ5VZR2 741 aa11.92□□□□□ -0.5
GPATCH4-214ENST00000529520 DEFB132Q7Z7B7 95 aa11.92□□□□□ -0.5
GPATCH4-214ENST00000529520 SIN3AQ96ST3 1273 aa11.92□□□□□ -0.5
GPATCH4-214ENST00000529520 EIF3AQ14152 1382 aaKnown RBP11.92□□□□□ -0.5
GPATCH4-214ENST00000529520 PHRF1Q9P1Y6 1649 aaKnown RBP11.91□□□□□ -0.5
GPATCH4-214ENST00000529520 ACEP12821 1306 aa11.9□□□□□ -0.5
GPATCH4-214ENST00000529520 FAM98CQ17RN3 349 aaKnown RBP11.9□□□□□ -0.5
GPATCH4-214ENST00000529520 NBPF8Q3BBV2 869 aa11.9□□□□□ -0.5
GPATCH4-214ENST00000529520 CCDC125Q86Z20 511 aa11.9□□□□□ -0.5
GPATCH4-214ENST00000529520 CHRNA2Q15822 529 aa11.89□□□□□ -0.51
GPATCH4-214ENST00000529520 FAM182BQ5T319 152 aa11.89□□□□□ -0.51
GPATCH4-214ENST00000529520 KRT27Q7Z3Y8 459 aa11.89□□□□□ -0.51
GPATCH4-214ENST00000529520 L3MBTL2Q969R5 705 aa11.89□□□□□ -0.51
GPATCH4-214ENST00000529520 QRICH2Q9H0J4 1663 aa11.89□□□□□ -0.51
GPATCH4-214ENST00000529520 POLR3AO14802 1390 aaPredicted RBP11.89□□□□□ -0.51
GPATCH4-214ENST00000529520 BLMP54132 1417 aaPredicted RBP11.88□□□□□ -0.51
GPATCH4-214ENST00000529520 PLEKHG3A1L390 1219 aa11.88□□□□□ -0.51
GPATCH4-214ENST00000529520 ZC3H6P61129 1189 aaKnown RBP11.88□□□□□ -0.51
GPATCH4-214ENST00000529520 CABP2Q9NPB3 220 aa11.88□□□□□ -0.51
GPATCH4-214ENST00000529520 CCDC61Q9Y6R9 512 aa11.88□□□□□ -0.51
GPATCH4-214ENST00000529520 KIAA0232Q92628 1395 aa11.88□□□□□ -0.51
GPATCH4-214ENST00000529520 SPATA31A5Q5VU36 1347 aa11.87□□□□□ -0.51
GPATCH4-214ENST00000529520 SPATA31A7Q8IWB4 1347 aa11.87□□□□□ -0.51
GPATCH4-214ENST00000529520 PRDM11Q9NQV5 511 aa11.87□□□□□ -0.51
GPATCH4-214ENST00000529520 ZRANB1Q9UGI0 708 aa11.87□□□□□ -0.51
GPATCH4-214ENST00000529520 TRPM1Q7Z4N2 1603 aa11.86□□□□□ -0.51
GPATCH4-214ENST00000529520 A0A0G2JS52 829 aa11.86□□□□□ -0.51
GPATCH4-214ENST00000529520 MYT1Q01538 1121 aa11.86□□□□□ -0.51
GPATCH4-214ENST00000529520 CENPJQ9HC77 1338 aaPredicted RBP11.86□□□□□ -0.51
GPATCH4-214ENST00000529520 THSD7AQ9UPZ6 1657 aa11.85□□□□□ -0.51
GPATCH4-214ENST00000529520 SRPK2P78362 688 aaKnown RBP11.85□□□□□ -0.51
GPATCH4-214ENST00000529520 NEUROD1Q13562 356 aa11.85□□□□□ -0.51
GPATCH4-214ENST00000529520 ABTB2Q8N961 1025 aa11.85□□□□□ -0.51
GPATCH4-214ENST00000529520 STRN4Q9NRL3 753 aa11.85□□□□□ -0.51
GPATCH4-214ENST00000529520 PPIP5K1Q6PFW1 1433 aa11.85□□□□□ -0.51
GPATCH4-214ENST00000529520 NRKQ7Z2Y5 1582 aa11.84□□□□□ -0.51
GPATCH4-214ENST00000529520 CAMTA1Q9Y6Y1 1673 aa11.84□□□□□ -0.51
GPATCH4-214ENST00000529520 SPATA31A1Q5TZJ5 1347 aa11.84□□□□□ -0.51
GPATCH4-214ENST00000529520 CABP1Q9NZU7 370 aa11.83□□□□□ -0.52
GPATCH4-214ENST00000529520 LMO7Q8WWI1 1683 aa11.83□□□□□ -0.52
GPATCH4-214ENST00000529520 RGPD5Q99666 1765 aa11.82□□□□□ -0.52
GPATCH4-214ENST00000529520 USP35Q9P2H5 1018 aa11.82□□□□□ -0.52
GPATCH4-214ENST00000529520 RGPD1P0DJD0 1748 aa11.82□□□□□ -0.52
GPATCH4-214ENST00000529520 TNS1Q9HBL0 1735 aaKnown RBP11.82□□□□□ -0.52
GPATCH4-214ENST00000529520 EN1Q05925 392 aaPredicted RBP11.81□□□□□ -0.52
GPATCH4-214ENST00000529520 SF3B2Q13435 895 aaKnown RBP11.81□□□□□ -0.52
GPATCH4-214ENST00000529520 LARP1Q6PKG0 1096 aaKnown RBP11.81□□□□□ -0.52
GPATCH4-214ENST00000529520 USP19O94966 1318 aa11.81□□□□□ -0.52
GPATCH4-214ENST00000529520 AKAP12Q02952 1782 aa11.8□□□□□ -0.52
GPATCH4-214ENST00000529520 GCP02774 474 aa11.8□□□□□ -0.52
GPATCH4-214ENST00000529520 EVA1CP58658 441 aa11.8□□□□□ -0.52
GPATCH4-214ENST00000529520 COL18A1P39060 1754 aa11.79□□□□□ -0.52
GPATCH4-214ENST00000529520 SSH2Q76I76 1423 aa11.79□□□□□ -0.52
GPATCH4-214ENST00000529520 PIK3C2AO00443 1686 aa11.79□□□□□ -0.52
GPATCH4-214ENST00000529520 PSDA5PKW4 1024 aaPredicted RBP11.79□□□□□ -0.52
GPATCH4-214ENST00000529520 NLRP13Q86W25 1043 aa11.79□□□□□ -0.52
GPATCH4-214ENST00000529520 USP6P35125 1406 aa11.78□□□□□ -0.52
GPATCH4-214ENST00000529520 BAG6P46379 1132 aa11.78□□□□□ -0.52
GPATCH4-214ENST00000529520 CPDO75976 1380 aa11.78□□□□□ -0.52
GPATCH4-214ENST00000529520 TRIM37O94972 964 aa11.77□□□□□ -0.53
GPATCH4-214ENST00000529520 NLRP6P59044 892 aa11.77□□□□□ -0.53
GPATCH4-214ENST00000529520 EZH2Q15910 746 aaKnown RBP11.77□□□□□ -0.53
GPATCH4-214ENST00000529520 ROCK2O75116 1388 aaKnown RBP11.77□□□□□ -0.53
GPATCH4-214ENST00000529520 ZBTB7CA1YPR0 619 aa11.76□□□□□ -0.53
GPATCH4-214ENST00000529520 BARGINQ6ZT62 677 aa11.76□□□□□ -0.53
GPATCH4-214ENST00000529520 AXIN2Q9Y2T1 843 aa11.76□□□□□ -0.53
GPATCH4-214ENST00000529520 EVC2Q86UK5 1308 aa11.76□□□□□ -0.53
GPATCH4-214ENST00000529520 SBF2Q86WG5 1849 aa11.76□□□□□ -0.53
GPATCH4-214ENST00000529520 COL5A2P05997 1499 aaPredicted RBP11.76□□□□□ -0.53
GPATCH4-214ENST00000529520 SLIT3O75094 1523 aa11.76□□□□□ -0.53
GPATCH4-214ENST00000529520 PARP4Q9UKK3 1724 aaKnown RBP11.74□□□□□ -0.53
GPATCH4-214ENST00000529520 FAM196AQ6ZSG2 479 aa11.74□□□□□ -0.53
GPATCH4-214ENST00000529520 TCP11L2Q8N4U5 519 aa11.74□□□□□ -0.53
GPATCH4-214ENST00000529520 CAMKK2Q96RR4 588 aa11.74□□□□□ -0.53
GPATCH4-214ENST00000529520 TTC21BQ7Z4L5 1316 aa11.74□□□□□ -0.53
GPATCH4-214ENST00000529520 BRD4O60885 1362 aaPredicted RBP11.73□□□□□ -0.53
GPATCH4-214ENST00000529520 PDE3BQ13370 1112 aa11.73□□□□□ -0.53
GPATCH4-214ENST00000529520 MON2Q7Z3U7 1717 aa11.73□□□□□ -0.53
GPATCH4-214ENST00000529520 WNK3Q9BYP7 1800 aa11.73□□□□□ -0.53
GPATCH4-214ENST00000529520 DISP2A7MBM2 1401 aa11.72□□□□□ -0.53
GPATCH4-214ENST00000529520 CPSF1Q10570 1443 aaKnown RBP11.72□□□□□ -0.53
GPATCH4-214ENST00000529520 SOX12O15370 315 aa11.72□□□□□ -0.53
GPATCH4-214ENST00000529520 APBA3O96018 575 aa11.72□□□□□ -0.53
GPATCH4-214ENST00000529520 R3HDM1Q15032 1099 aaKnown RBP11.72□□□□□ -0.53
GPATCH4-214ENST00000529520 NUP188Q5SRE5 1749 aa11.72□□□□□ -0.53
GPATCH4-214ENST00000529520 PEAK1Q9H792 1746 aa11.72□□□□□ -0.53
GPATCH4-214ENST00000529520 RREB1Q92766 1687 aa11.71□□□□□ -0.53
GPATCH4-214ENST00000529520 LRP5O75197 1615 aa11.71□□□□□ -0.53
GPATCH4-214ENST00000529520 CRB1P82279 1406 aa11.71□□□□□ -0.53
GPATCH4-214ENST00000529520 AATKQ6ZMQ8 1374 aa11.71□□□□□ -0.53
GPATCH4-214ENST00000529520 ARHGEF25Q86VW2 580 aa11.71□□□□□ -0.53
GPATCH4-214ENST00000529520 ZNF692Q9BU19 519 aaPredicted RBP11.71□□□□□ -0.53
GPATCH4-214ENST00000529520 THRAP3Q9Y2W1 955 aaKnown RBP11.71□□□□□ -0.53
GPATCH4-214ENST00000529520 CD163L1Q9NR16 1453 aa11.7□□□□□ -0.54
GPATCH4-214ENST00000529520 PTF1AQ7RTS3 328 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms