RNA–Protein interactions for RNA: ENST00000529276.1

NDUFS3-207, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-207ENST00000529276 EVC2Q86UK5 1308 aa29.68■■■□□ 2.34
NDUFS3-207ENST00000529276 BCL9LQ86UU0 1499 aa29.68■■■□□ 2.34
NDUFS3-207ENST00000529276 PCGF6Q9BYE7 350 aa29.67■■■□□ 2.34
NDUFS3-207ENST00000529276 ATRNO75882 1429 aa29.67■■■□□ 2.34
NDUFS3-207ENST00000529276 SLIT2O94813 1529 aa29.65■■■□□ 2.34
NDUFS3-207ENST00000529276 RGS12O14924 1447 aa29.63■■■□□ 2.33
NDUFS3-207ENST00000529276 UNC5CLQ8IV45 518 aa29.61■■■□□ 2.33
NDUFS3-207ENST00000529276 CABP1Q9NZU7 370 aa29.59■■■□□ 2.33
NDUFS3-207ENST00000529276 SBNO2Q9Y2G9 1366 aa29.59■■■□□ 2.33
NDUFS3-207ENST00000529276 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.59■■■□□ 2.33
NDUFS3-207ENST00000529276 CLSPNQ9HAW4 1339 aa29.56■■■□□ 2.32
NDUFS3-207ENST00000529276 CRYBG1Q9Y4K1 1723 aa29.56■■■□□ 2.32
NDUFS3-207ENST00000529276 FAM83GA6ND36 823 aa29.55■■■□□ 2.32
NDUFS3-207ENST00000529276 NUTM2GQ5VZR2 741 aa29.55■■■□□ 2.32
NDUFS3-207ENST00000529276 GJD4Q96KN9 370 aaPredicted RBP29.55■■■□□ 2.32
NDUFS3-207ENST00000529276 PLCH1Q4KWH8 1693 aa29.55■■■□□ 2.32
NDUFS3-207ENST00000529276 NWD2Q9ULI1 1742 aa29.53■■■□□ 2.32
NDUFS3-207ENST00000529276 BRD4O60885 1362 aaPredicted RBP29.52■■■□□ 2.32
NDUFS3-207ENST00000529276 ATAD2Q6PL18 1390 aa29.52■■■□□ 2.32
NDUFS3-207ENST00000529276 ABTB2Q8N961 1025 aa29.52■■■□□ 2.32
NDUFS3-207ENST00000529276 USP6P35125 1406 aa29.52■■■□□ 2.32
NDUFS3-207ENST00000529276 VPS72Q15906 364 aa29.49■■■□□ 2.31
NDUFS3-207ENST00000529276 PRDM11Q9NQV5 511 aa29.49■■■□□ 2.31
NDUFS3-207ENST00000529276 COL14A1Q05707 1796 aaKnown RBP29.49■■■□□ 2.31
NDUFS3-207ENST00000529276 PHRF1Q9P1Y6 1649 aaKnown RBP29.49■■■□□ 2.31
NDUFS3-207ENST00000529276 BTG4Q9NY30 223 aa29.47■■■□□ 2.31
NDUFS3-207ENST00000529276 GLI3P10071 1580 aa29.47■■■□□ 2.31
NDUFS3-207ENST00000529276 UPF1Q92900 1129 aaKnown RBP eCLIP29.46■■■□□ 2.31
NDUFS3-207ENST00000529276 TIMELESSQ9UNS1 1208 aa29.46■■■□□ 2.31
NDUFS3-207ENST00000529276 KIAA0232Q92628 1395 aa29.46■■■□□ 2.31
NDUFS3-207ENST00000529276 USP19O94966 1318 aa29.45■■■□□ 2.31
NDUFS3-207ENST00000529276 NLRP13Q86W25 1043 aa29.45■■■□□ 2.31
NDUFS3-207ENST00000529276 CCDC9Q9Y3X0 531 aaKnown RBP29.45■■■□□ 2.31
NDUFS3-207ENST00000529276 ZNF692Q9BU19 519 aaPredicted RBP29.44■■■□□ 2.3
NDUFS3-207ENST00000529276 NRAPQ86VF7 1730 aa29.44■■■□□ 2.3
NDUFS3-207ENST00000529276 SSH2Q76I76 1423 aa29.44■■■□□ 2.3
NDUFS3-207ENST00000529276 ST20-MTHFSA0A0A6YYL1 179 aa29.42■■■□□ 2.3
NDUFS3-207ENST00000529276 ZC3H6P61129 1189 aaKnown RBP29.42■■■□□ 2.3
NDUFS3-207ENST00000529276 NRKQ7Z2Y5 1582 aa29.42■■■□□ 2.3
NDUFS3-207ENST00000529276 CPSF1Q10570 1443 aaKnown RBP29.4■■■□□ 2.3
NDUFS3-207ENST00000529276 CHRNA2Q15822 529 aa29.4■■■□□ 2.3
NDUFS3-207ENST00000529276 AKAP12Q02952 1782 aa29.39■■■□□ 2.3
NDUFS3-207ENST00000529276 CCER1Q8TC90 406 aaPredicted RBP29.39■■■□□ 2.3
NDUFS3-207ENST00000529276 TESK2Q96S53 571 aa29.39■■■□□ 2.3
NDUFS3-207ENST00000529276 NLRP6P59044 892 aa29.38■■■□□ 2.29
NDUFS3-207ENST00000529276 TTC21BQ7Z4L5 1316 aa29.38■■■□□ 2.29
NDUFS3-207ENST00000529276 USP47Q96K76 1375 aa29.38■■■□□ 2.29
NDUFS3-207ENST00000529276 GCP02774 474 aa29.37■■■□□ 2.29
NDUFS3-207ENST00000529276 CPDO75976 1380 aa29.37■■■□□ 2.29
NDUFS3-207ENST00000529276 KTN1Q86UP2 1357 aaKnown RBP29.37■■■□□ 2.29
NDUFS3-207ENST00000529276 TMC1Q8TDI8 760 aa29.36■■■□□ 2.29
NDUFS3-207ENST00000529276 PUS7Q96PZ0 661 aaKnown RBP29.36■■■□□ 2.29
NDUFS3-207ENST00000529276 PIK3C2AO00443 1686 aa29.35■■■□□ 2.29
NDUFS3-207ENST00000529276 SLC24A1O60721 1099 aa29.35■■■□□ 2.29
NDUFS3-207ENST00000529276 SEPT12Q8IYM1 358 aa29.34■■■□□ 2.29
NDUFS3-207ENST00000529276 TTC21AQ8NDW8 1320 aa29.34■■■□□ 2.29
NDUFS3-207ENST00000529276 SLIT3O75094 1523 aa29.32■■■□□ 2.28
NDUFS3-207ENST00000529276 CD163L1Q9NR16 1453 aa29.32■■■□□ 2.28
NDUFS3-207ENST00000529276 ONECUT3O60422 494 aaPredicted RBP29.32■■■□□ 2.28
NDUFS3-207ENST00000529276 SLC12A5Q9H2X9 1139 aa29.32■■■□□ 2.28
NDUFS3-207ENST00000529276 MON2Q7Z3U7 1717 aa29.31■■■□□ 2.28
NDUFS3-207ENST00000529276 SPATA31A5Q5VU36 1347 aa29.31■■■□□ 2.28
NDUFS3-207ENST00000529276 SPATA31A7Q8IWB4 1347 aa29.31■■■□□ 2.28
NDUFS3-207ENST00000529276 HDGFL2Q7Z4V5 671 aaPredicted RBP29.3■■■□□ 2.28
NDUFS3-207ENST00000529276 STRN4Q9NRL3 753 aa29.3■■■□□ 2.28
NDUFS3-207ENST00000529276 FAM98CQ17RN3 349 aaKnown RBP29.29■■■□□ 2.28
NDUFS3-207ENST00000529276 A0A0G2JS52 829 aa29.28■■■□□ 2.28
NDUFS3-207ENST00000529276 MYT1Q01538 1121 aa29.28■■■□□ 2.28
NDUFS3-207ENST00000529276 TERF2IPQ9NYB0 399 aa29.27■■■□□ 2.28
NDUFS3-207ENST00000529276 LMO7Q8WWI1 1683 aa29.27■■■□□ 2.28
NDUFS3-207ENST00000529276 CAMTA1Q9Y6Y1 1673 aa29.27■■■□□ 2.28
NDUFS3-207ENST00000529276 NINLQ9Y2I6 1382 aa29.26■■■□□ 2.28
NDUFS3-207ENST00000529276 EVA1CP58658 441 aa29.26■■■□□ 2.27
NDUFS3-207ENST00000529276 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.26■■■□□ 2.27
NDUFS3-207ENST00000529276 ZBTB7CA1YPR0 619 aa29.25■■■□□ 2.27
NDUFS3-207ENST00000529276 TMF1P82094 1093 aa29.25■■■□□ 2.27
NDUFS3-207ENST00000529276 A0A1W2PP64 1363 aa29.25■■■□□ 2.27
NDUFS3-207ENST00000529276 BRWD3Q6RI45 1802 aa29.24■■■□□ 2.27
NDUFS3-207ENST00000529276 SPATA31A1Q5TZJ5 1347 aa29.24■■■□□ 2.27
NDUFS3-207ENST00000529276 EDC4Q6P2E9 1401 aaKnown RBP29.23■■■□□ 2.27
NDUFS3-207ENST00000529276 KCNH5Q8NCM2 988 aa29.23■■■□□ 2.27
NDUFS3-207ENST00000529276 KRT27Q7Z3Y8 459 aa29.22■■■□□ 2.27
NDUFS3-207ENST00000529276 AATKQ6ZMQ8 1374 aa29.22■■■□□ 2.27
NDUFS3-207ENST00000529276 SOX12O15370 315 aa29.2■■■□□ 2.26
NDUFS3-207ENST00000529276 NME9Q86XW9 330 aa29.2■■■□□ 2.26
NDUFS3-207ENST00000529276 USP31Q70CQ4 1352 aa29.2■■■□□ 2.26
NDUFS3-207ENST00000529276 COL5A2P05997 1499 aaPredicted RBP29.19■■■□□ 2.26
NDUFS3-207ENST00000529276 LARP1Q6PKG0 1096 aaKnown RBP29.19■■■□□ 2.26
NDUFS3-207ENST00000529276 ZRANB1Q9UGI0 708 aa29.19■■■□□ 2.26
NDUFS3-207ENST00000529276 USP35Q9P2H5 1018 aa29.18■■■□□ 2.26
NDUFS3-207ENST00000529276 THSD7AQ9UPZ6 1657 aa29.18■■■□□ 2.26
NDUFS3-207ENST00000529276 ARHGEF25Q86VW2 580 aa29.17■■■□□ 2.26
NDUFS3-207ENST00000529276 NFAT5O94916 1531 aa29.16■■■□□ 2.26
NDUFS3-207ENST00000529276 CDCA8Q53HL2 280 aa29.16■■■□□ 2.26
NDUFS3-207ENST00000529276 CCDC125Q86Z20 511 aa29.16■■■□□ 2.26
NDUFS3-207ENST00000529276 USP54Q70EL1 1684 aa29.15■■■□□ 2.26
NDUFS3-207ENST00000529276 ANKRD36BQ8N2N9 1353 aa29.13■■■□□ 2.25
NDUFS3-207ENST00000529276 BARGINQ6ZT62 677 aa29.13■■■□□ 2.25
NDUFS3-207ENST00000529276 TCP11L2Q8N4U5 519 aa29.13■■■□□ 2.25
NDUFS3-207ENST00000529276 COL18A1P39060 1754 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms