RNA–Protein interactions for RNA: ENST00000529265.5

BEST1-206, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,421 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-206ENST00000529265 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.14■□□□□ 0.65
BEST1-206ENST00000529265 TRPM3Q9HCF6 1732 aaPredicted RBP19.13■□□□□ 0.65
BEST1-206ENST00000529265 COL16A1Q07092 1604 aaPredicted RBP19.13■□□□□ 0.65
BEST1-206ENST00000529265 SBNO1A3KN83 1393 aa19.12■□□□□ 0.65
BEST1-206ENST00000529265 BRD4O60885 1362 aaPredicted RBP19.12■□□□□ 0.65
BEST1-206ENST00000529265 TTC21BQ7Z4L5 1316 aa19.12■□□□□ 0.65
BEST1-206ENST00000529265 EDC4Q6P2E9 1401 aaKnown RBP19.12■□□□□ 0.65
BEST1-206ENST00000529265 SPATA31A3Q5VYP0 1347 aa19.11■□□□□ 0.65
BEST1-206ENST00000529265 DDX10Q13206 875 aaKnown RBP19.11■□□□□ 0.65
BEST1-206ENST00000529265 ABTB2Q8N961 1025 aa19.11■□□□□ 0.65
BEST1-206ENST00000529265 PLEKHG5O94827 1062 aa19.1■□□□□ 0.65
BEST1-206ENST00000529265 CARD14Q9BXL6 1004 aa19.1■□□□□ 0.65
BEST1-206ENST00000529265 TNS3Q68CZ2 1445 aa19.1■□□□□ 0.65
BEST1-206ENST00000529265 NSD3Q9BZ95 1437 aa19.1■□□□□ 0.65
BEST1-206ENST00000529265 TTC21AQ8NDW8 1320 aa19.1■□□□□ 0.65
BEST1-206ENST00000529265 KNSTRNQ9Y448 316 aa19.09■□□□□ 0.65
BEST1-206ENST00000529265 NRKQ7Z2Y5 1582 aa19.09■□□□□ 0.65
BEST1-206ENST00000529265 NUTM2GQ5VZR2 741 aa19.08■□□□□ 0.65
BEST1-206ENST00000529265 ARHGEF10O15013 1369 aa19.08■□□□□ 0.65
BEST1-206ENST00000529265 SSH2Q76I76 1423 aa19.08■□□□□ 0.64
BEST1-206ENST00000529265 ALS2Q96Q42 1657 aa19.08■□□□□ 0.64
BEST1-206ENST00000529265 NLRP6P59044 892 aa19.07■□□□□ 0.64
BEST1-206ENST00000529265 KIF20BQ96Q89 1820 aa19.07■□□□□ 0.64
BEST1-206ENST00000529265 CGNL1Q0VF96 1302 aa19.06■□□□□ 0.64
BEST1-206ENST00000529265 NME9Q86XW9 330 aa19.06■□□□□ 0.64
BEST1-206ENST00000529265 JCADQ9P266 1359 aa19.06■□□□□ 0.64
BEST1-206ENST00000529265 NLRP13Q86W25 1043 aa19.05■□□□□ 0.64
BEST1-206ENST00000529265 PIK3C2AO00443 1686 aa19.04■□□□□ 0.64
BEST1-206ENST00000529265 PNPLA6Q8IY17 1366 aa19.04■□□□□ 0.64
BEST1-206ENST00000529265 HAP1P54257 671 aaPredicted RBP19.04■□□□□ 0.64
BEST1-206ENST00000529265 SHPRHQ149N8 1683 aa19.04■□□□□ 0.64
BEST1-206ENST00000529265 GGNBP2Q9H3C7 697 aa19.03■□□□□ 0.64
BEST1-206ENST00000529265 FYB1O15117 783 aa19.02■□□□□ 0.64
BEST1-206ENST00000529265 CNGB1Q14028 1251 aaPredicted RBP19.02■□□□□ 0.64
BEST1-206ENST00000529265 COG3Q96JB2 828 aa19.02■□□□□ 0.64
BEST1-206ENST00000529265 ZRANB1Q9UGI0 708 aa19.02■□□□□ 0.64
BEST1-206ENST00000529265 PER1O15534 1290 aaPredicted RBP19.01■□□□□ 0.63
BEST1-206ENST00000529265 CABLES1Q8TDN4 633 aa19.01■□□□□ 0.63
BEST1-206ENST00000529265 NUTM2BA6NNL0 878 aaPredicted RBP19■□□□□ 0.63
BEST1-206ENST00000529265 NUTM2EB1AL46 878 aaPredicted RBP19■□□□□ 0.63
BEST1-206ENST00000529265 NUTM2AQ8IVF1 878 aaPredicted RBP19■□□□□ 0.63
BEST1-206ENST00000529265 COL22A1Q8NFW1 1626 aaPredicted RBP19■□□□□ 0.63
BEST1-206ENST00000529265 SOX12O15370 315 aa18.99■□□□□ 0.63
BEST1-206ENST00000529265 CC2D1BQ5T0F9 858 aaKnown RBP18.99■□□□□ 0.63
BEST1-206ENST00000529265 USP31Q70CQ4 1352 aa18.98■□□□□ 0.63
BEST1-206ENST00000529265 SPATA31A6Q5VVP1 1343 aa18.98■□□□□ 0.63
BEST1-206ENST00000529265 ANKRD26Q9UPS8 1709 aa18.97■□□□□ 0.63
BEST1-206ENST00000529265 AMER1Q5JTC6 1135 aaPredicted RBP18.97■□□□□ 0.63
BEST1-206ENST00000529265 MARF1Q9Y4F3 1742 aaKnown RBP18.97■□□□□ 0.63
BEST1-206ENST00000529265 NSD2O96028 1365 aa18.97■□□□□ 0.63
BEST1-206ENST00000529265 MED1Q15648 1581 aaPredicted RBP18.96■□□□□ 0.63
BEST1-206ENST00000529265 KCNH5Q8NCM2 988 aa18.96■□□□□ 0.63
BEST1-206ENST00000529265 PHRF1Q9P1Y6 1649 aaKnown RBP18.95■□□□□ 0.62
BEST1-206ENST00000529265 USP54Q70EL1 1684 aa18.95■□□□□ 0.62
BEST1-206ENST00000529265 ABCA3Q99758 1704 aa18.95■□□□□ 0.62
BEST1-206ENST00000529265 GCP02774 474 aa18.95■□□□□ 0.62
BEST1-206ENST00000529265 MORC1Q86VD1 984 aa18.95■□□□□ 0.62
BEST1-206ENST00000529265 USP19O94966 1318 aa18.95■□□□□ 0.62
BEST1-206ENST00000529265 OVOS2A0A0J9YW53 1432 aa18.95■□□□□ 0.62
BEST1-206ENST00000529265 OVOS2Q6IE36 1432 aa18.95■□□□□ 0.62
BEST1-206ENST00000529265 CRYBG1Q9Y4K1 1723 aa18.95■□□□□ 0.62
BEST1-206ENST00000529265 ZBTB7CA1YPR0 619 aa18.93■□□□□ 0.62
BEST1-206ENST00000529265 ADAMTS2O95450 1211 aa18.93■□□□□ 0.62
BEST1-206ENST00000529265 TNNT2P45379 298 aaPredicted RBP18.93■□□□□ 0.62
BEST1-206ENST00000529265 ZC3H6P61129 1189 aaKnown RBP18.92■□□□□ 0.62
BEST1-206ENST00000529265 MEX3CQ5U5Q3 659 aaKnown RBP18.92■□□□□ 0.62
BEST1-206ENST00000529265 SLIT3O75094 1523 aa18.92■□□□□ 0.62
BEST1-206ENST00000529265 NPC1L1Q9UHC9 1359 aa18.92■□□□□ 0.62
BEST1-206ENST00000529265 MAP2P11137 1827 aaKnown RBP18.91■□□□□ 0.62
BEST1-206ENST00000529265 LTN1O94822 1766 aa18.89■□□□□ 0.61
BEST1-206ENST00000529265 FBLN1P23142 703 aa18.89■□□□□ 0.61
BEST1-206ENST00000529265 PRDM11Q9NQV5 511 aa18.89■□□□□ 0.61
BEST1-206ENST00000529265 KIAA0232Q92628 1395 aa18.87■□□□□ 0.61
BEST1-206ENST00000529265 LRP6O75581 1613 aa18.87■□□□□ 0.61
BEST1-206ENST00000529265 NFAT5O94916 1531 aa18.87■□□□□ 0.61
BEST1-206ENST00000529265 RRS1Q15050 365 aaKnown RBP18.86■□□□□ 0.61
BEST1-206ENST00000529265 C8orf37Q96NL8 207 aa18.86■□□□□ 0.61
BEST1-206ENST00000529265 PPM1GO15355 546 aaPredicted RBP18.85■□□□□ 0.61
BEST1-206ENST00000529265 AMPHP49418 695 aa18.85■□□□□ 0.61
BEST1-206ENST00000529265 CHRNA2Q15822 529 aa18.85■□□□□ 0.61
BEST1-206ENST00000529265 NGLY1Q96IV0 654 aa18.85■□□□□ 0.61
BEST1-206ENST00000529265 FAM83GA6ND36 823 aa18.84■□□□□ 0.61
BEST1-206ENST00000529265 ARHGEF25Q86VW2 580 aa18.84■□□□□ 0.61
BEST1-206ENST00000529265 CPDO75976 1380 aa18.84■□□□□ 0.61
BEST1-206ENST00000529265 RALBP1Q15311 655 aa18.83■□□□□ 0.61
BEST1-206ENST00000529265 AATKQ6ZMQ8 1374 aa18.83■□□□□ 0.61
BEST1-206ENST00000529265 MAP3K19Q56UN5 1328 aa18.83■□□□□ 0.6
BEST1-206ENST00000529265 ANP32CO43423 234 aa18.83■□□□□ 0.6
BEST1-206ENST00000529265 COL14A1Q05707 1796 aaKnown RBP18.82■□□□□ 0.6
BEST1-206ENST00000529265 RGPD5Q99666 1765 aa18.82■□□□□ 0.6
BEST1-206ENST00000529265 EMILIN1Q9Y6C2 1016 aa18.82■□□□□ 0.6
BEST1-206ENST00000529265 PARD3Q8TEW0 1356 aa18.81■□□□□ 0.6
BEST1-206ENST00000529265 DIEXFQ68CQ4 756 aaKnown RBP18.81■□□□□ 0.6
BEST1-206ENST00000529265 POLKQ9UBT6 870 aa18.81■□□□□ 0.6
BEST1-206ENST00000529265 BTG4Q9NY30 223 aa18.8■□□□□ 0.6
BEST1-206ENST00000529265 PLCH1Q4KWH8 1693 aa18.8■□□□□ 0.6
BEST1-206ENST00000529265 EVA1CP58658 441 aa18.79■□□□□ 0.6
BEST1-206ENST00000529265 PRKRIP1Q9H875 184 aaPredicted RBP18.79■□□□□ 0.6
BEST1-206ENST00000529265 COL18A1P39060 1754 aa18.79■□□□□ 0.6
BEST1-206ENST00000529265 PPP2R1AP30153 589 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms