RNA–Protein interactions for RNA: ENST00000529073.5

CCDC90B-211, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5 BASIC

Gene CCDC90B, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-211ENST00000529073 PSME1Q06323 249 aa16.22■□□□□ 0.19
CCDC90B-211ENST00000529073 MEX3CQ5U5Q3 659 aaKnown RBP16.22■□□□□ 0.19
CCDC90B-211ENST00000529073 LMOD2Q6P5Q4 547 aa16.22■□□□□ 0.19
CCDC90B-211ENST00000529073 NGDNQ8NEJ9 315 aaKnown RBP16.22■□□□□ 0.19
CCDC90B-211ENST00000529073 POLR3AO14802 1390 aaPredicted RBP16.22■□□□□ 0.19
CCDC90B-211ENST00000529073 PHRF1Q9P1Y6 1649 aaKnown RBP16.22■□□□□ 0.19
CCDC90B-211ENST00000529073 NRKQ7Z2Y5 1582 aa16.21■□□□□ 0.19
CCDC90B-211ENST00000529073 AKAP12Q02952 1782 aa16.21■□□□□ 0.19
CCDC90B-211ENST00000529073 C1QBPQ07021 282 aaKnown RBP16.21■□□□□ 0.19
CCDC90B-211ENST00000529073 C8orf37Q96NL8 207 aa16.21■□□□□ 0.19
CCDC90B-211ENST00000529073 CABP1Q9NZU7 370 aa16.21■□□□□ 0.19
CCDC90B-211ENST00000529073 SBNO1A3KN83 1393 aa16.2■□□□□ 0.18
CCDC90B-211ENST00000529073 CD163L1Q9NR16 1453 aa16.2■□□□□ 0.18
CCDC90B-211ENST00000529073 AFF2P51816 1311 aa16.19■□□□□ 0.18
CCDC90B-211ENST00000529073 EVC2Q86UK5 1308 aa16.19■□□□□ 0.18
CCDC90B-211ENST00000529073 PIK3C2AO00443 1686 aa16.19■□□□□ 0.18
CCDC90B-211ENST00000529073 SBNO2Q9Y2G9 1366 aa16.19■□□□□ 0.18
CCDC90B-211ENST00000529073 PLEKHG3A1L390 1219 aa16.18■□□□□ 0.18
CCDC90B-211ENST00000529073 PAK3O75914 559 aaPredicted RBP16.18■□□□□ 0.18
CCDC90B-211ENST00000529073 CCDC61Q9Y6R9 512 aa16.18■□□□□ 0.18
CCDC90B-211ENST00000529073 PLCH1Q4KWH8 1693 aa16.18■□□□□ 0.18
CCDC90B-211ENST00000529073 MON2Q7Z3U7 1717 aa16.17■□□□□ 0.18
CCDC90B-211ENST00000529073 MYOM1P52179 1685 aa16.17■□□□□ 0.18
CCDC90B-211ENST00000529073 USP6P35125 1406 aa16.16■□□□□ 0.18
CCDC90B-211ENST00000529073 SSH2Q76I76 1423 aa16.15■□□□□ 0.18
CCDC90B-211ENST00000529073 ZRANB1Q9UGI0 708 aa16.15■□□□□ 0.18
CCDC90B-211ENST00000529073 SLC12A5Q9H2X9 1139 aa16.14■□□□□ 0.17
CCDC90B-211ENST00000529073 NRAPQ86VF7 1730 aa16.13■□□□□ 0.17
CCDC90B-211ENST00000529073 CPSF1Q10570 1443 aaKnown RBP16.12■□□□□ 0.17
CCDC90B-211ENST00000529073 BCL9LQ86UU0 1499 aa16.12■□□□□ 0.17
CCDC90B-211ENST00000529073 HSPA5P11021 654 aaKnown RBP16.12■□□□□ 0.17
CCDC90B-211ENST00000529073 TIMELESSQ9UNS1 1208 aa16.12■□□□□ 0.17
CCDC90B-211ENST00000529073 ARHGEF10O15013 1369 aa16.12■□□□□ 0.17
CCDC90B-211ENST00000529073 NGLY1Q96IV0 654 aa16.11■□□□□ 0.17
CCDC90B-211ENST00000529073 A0A1W2PP64 1363 aa16.11■□□□□ 0.17
CCDC90B-211ENST00000529073 ATAD2Q6PL18 1390 aa16.11■□□□□ 0.17
CCDC90B-211ENST00000529073 SLIT2O94813 1529 aa16.1■□□□□ 0.17
CCDC90B-211ENST00000529073 TMC1Q8TDI8 760 aa16.1■□□□□ 0.17
CCDC90B-211ENST00000529073 GLI3P10071 1580 aa16.09■□□□□ 0.17
CCDC90B-211ENST00000529073 FAM83GA6ND36 823 aa16.08■□□□□ 0.16
CCDC90B-211ENST00000529073 HAP1P54257 671 aaPredicted RBP16.08■□□□□ 0.16
CCDC90B-211ENST00000529073 CHRNA2Q15822 529 aa16.08■□□□□ 0.16
CCDC90B-211ENST00000529073 RGS12O14924 1447 aa16.08■□□□□ 0.16
CCDC90B-211ENST00000529073 SLIT3O75094 1523 aa16.08■□□□□ 0.16
CCDC90B-211ENST00000529073 C11orf95C9JLR9 678 aaPredicted RBP16.07■□□□□ 0.16
CCDC90B-211ENST00000529073 NME9Q86XW9 330 aa16.07■□□□□ 0.16
CCDC90B-211ENST00000529073 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.07■□□□□ 0.163e-6■■■■□ 25.7
CCDC90B-211ENST00000529073 USP21Q9UK80 565 aa16.07■□□□□ 0.16
CCDC90B-211ENST00000529073 USP19O94966 1318 aa16.07■□□□□ 0.16
CCDC90B-211ENST00000529073 TTC21BQ7Z4L5 1316 aa16.07■□□□□ 0.16
CCDC90B-211ENST00000529073 KTN1Q86UP2 1357 aaKnown RBP16.07■□□□□ 0.16
CCDC90B-211ENST00000529073 KIAA0232Q92628 1395 aa16.07■□□□□ 0.16
CCDC90B-211ENST00000529073 ATRNO75882 1429 aa16.07■□□□□ 0.16
CCDC90B-211ENST00000529073 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.07■□□□□ 0.16
CCDC90B-211ENST00000529073 COL14A1Q05707 1796 aaKnown RBP16.06■□□□□ 0.16
CCDC90B-211ENST00000529073 SOX12O15370 315 aa16.06■□□□□ 0.16
CCDC90B-211ENST00000529073 ZC3H6P61129 1189 aaKnown RBP16.06■□□□□ 0.16
CCDC90B-211ENST00000529073 FNBP4Q8N3X1 1017 aaPredicted RBP16.06■□□□□ 0.16
CCDC90B-211ENST00000529073 ABTB2Q8N961 1025 aa16.06■□□□□ 0.16
CCDC90B-211ENST00000529073 LMO7Q8WWI1 1683 aa16.05■□□□□ 0.16
CCDC90B-211ENST00000529073 QTRT2Q9H974 415 aaKnown RBP16.05■□□□□ 0.16
CCDC90B-211ENST00000529073 NWD2Q9ULI1 1742 aa16.04■□□□□ 0.16
CCDC90B-211ENST00000529073 NFAT5O94916 1531 aa16.04■□□□□ 0.16
CCDC90B-211ENST00000529073 ZBTB7CA1YPR0 619 aa16.03■□□□□ 0.16
CCDC90B-211ENST00000529073 POLR3GLQ9BT43 218 aa16.03■□□□□ 0.16
CCDC90B-211ENST00000529073 USP54Q70EL1 1684 aa16.02■□□□□ 0.16
CCDC90B-211ENST00000529073 CAMTA1Q9Y6Y1 1673 aa16.02■□□□□ 0.16
CCDC90B-211ENST00000529073 TMF1P82094 1093 aa16.02■□□□□ 0.16
CCDC90B-211ENST00000529073 ZNF772Q68DY9 489 aaPredicted RBP16.02■□□□□ 0.16
CCDC90B-211ENST00000529073 COL18A1P39060 1754 aa16.02■□□□□ 0.15
CCDC90B-211ENST00000529073 RGPD5Q99666 1765 aa16.01■□□□□ 0.15
CCDC90B-211ENST00000529073 FBLN1P23142 703 aa16.01■□□□□ 0.15
CCDC90B-211ENST00000529073 NLRP6P59044 892 aa16.01■□□□□ 0.15
CCDC90B-211ENST00000529073 BTG4Q9NY30 223 aa16.01■□□□□ 0.15
CCDC90B-211ENST00000529073 SLC4A2P04920 1241 aa16■□□□□ 0.15
CCDC90B-211ENST00000529073 EIF4G2P78344 907 aaKnown RBP eCLIP16■□□□□ 0.15
CCDC90B-211ENST00000529073 PRDM11Q9NQV5 511 aa16■□□□□ 0.15
CCDC90B-211ENST00000529073 EDC4Q6P2E9 1401 aaKnown RBP16■□□□□ 0.15
CCDC90B-211ENST00000529073 GCP02774 474 aa15.99■□□□□ 0.15
CCDC90B-211ENST00000529073 UNC5CLQ8IV45 518 aa15.99■□□□□ 0.15
CCDC90B-211ENST00000529073 CARD14Q9BXL6 1004 aa15.99■□□□□ 0.15
CCDC90B-211ENST00000529073 U3KPZ7 1027 aaPredicted RBP15.99■□□□□ 0.15
CCDC90B-211ENST00000529073 OVOS2A0A0J9YW53 1432 aa15.99■□□□□ 0.15
CCDC90B-211ENST00000529073 OVOS2Q6IE36 1432 aa15.99■□□□□ 0.15
CCDC90B-211ENST00000529073 BRWD3Q6RI45 1802 aa15.98■□□□□ 0.15
CCDC90B-211ENST00000529073 SOCS7O14512 581 aa15.98■□□□□ 0.15
CCDC90B-211ENST00000529073 RXRBP28702 533 aa15.98■□□□□ 0.15
CCDC90B-211ENST00000529073 KIF20BQ96Q89 1820 aa15.98■□□□□ 0.15
CCDC90B-211ENST00000529073 ANKRD36BQ8N2N9 1353 aa15.98■□□□□ 0.15
CCDC90B-211ENST00000529073 LTN1O94822 1766 aa15.97■□□□□ 0.15
CCDC90B-211ENST00000529073 NSD3Q9BZ95 1437 aa15.96■□□□□ 0.15
CCDC90B-211ENST00000529073 HDGFL2Q7Z4V5 671 aaPredicted RBP15.96■□□□□ 0.15
CCDC90B-211ENST00000529073 NLRP13Q86W25 1043 aa15.96■□□□□ 0.15
CCDC90B-211ENST00000529073 STRN4Q9NRL3 753 aa15.96■□□□□ 0.15
CCDC90B-211ENST00000529073 TRPC5Q9UL62 973 aaPredicted RBP15.96■□□□□ 0.15
CCDC90B-211ENST00000529073 TTC21AQ8NDW8 1320 aa15.95■□□□□ 0.14
CCDC90B-211ENST00000529073 RBM6P78332 1123 aaKnown RBP15.95■□□□□ 0.14
CCDC90B-211ENST00000529073 PUS7Q96PZ0 661 aaKnown RBP15.95■□□□□ 0.14
CCDC90B-211ENST00000529073 ZNF692Q9BU19 519 aaPredicted RBP15.95■□□□□ 0.14
CCDC90B-211ENST00000529073 AXIN2Q9Y2T1 843 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms