RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 NLRP13Q86W25 1043 aa10.82□□□□□ -0.68
SSBP3-211ENST00000528787 PANK3Q9H999 370 aa10.82□□□□□ -0.68
SSBP3-211ENST00000528787 ABTB2Q8N961 1025 aa10.81□□□□□ -0.68
SSBP3-211ENST00000528787 KCNH5Q8NCM2 988 aa10.81□□□□□ -0.68
SSBP3-211ENST00000528787 TNS3Q68CZ2 1445 aa10.81□□□□□ -0.68
SSBP3-211ENST00000528787 KIF20BQ96Q89 1820 aa10.81□□□□□ -0.68
SSBP3-211ENST00000528787 COG3Q96JB2 828 aa10.8□□□□□ -0.68
SSBP3-211ENST00000528787 PXDNQ92626 1479 aa10.8□□□□□ -0.68
SSBP3-211ENST00000528787 NRKQ7Z2Y5 1582 aa10.79□□□□□ -0.68
SSBP3-211ENST00000528787 NSD3Q9BZ95 1437 aa10.79□□□□□ -0.68
SSBP3-211ENST00000528787 C11orf95C9JLR9 678 aaPredicted RBP10.79□□□□□ -0.68
SSBP3-211ENST00000528787 HAP1P54257 671 aaPredicted RBP10.79□□□□□ -0.68
SSBP3-211ENST00000528787 CD163L1Q9NR16 1453 aa10.79□□□□□ -0.68
SSBP3-211ENST00000528787 SPATA31A3Q5VYP0 1347 aa10.79□□□□□ -0.68
SSBP3-211ENST00000528787 TTC21BQ7Z4L5 1316 aa10.79□□□□□ -0.68
SSBP3-211ENST00000528787 JCADQ9P266 1359 aa10.78□□□□□ -0.68
SSBP3-211ENST00000528787 TRPM3Q9HCF6 1732 aaPredicted RBP10.78□□□□□ -0.68
SSBP3-211ENST00000528787 ANKRD26Q9UPS8 1709 aa10.78□□□□□ -0.68
SSBP3-211ENST00000528787 DDX10Q13206 875 aaKnown RBP10.78□□□□□ -0.68
SSBP3-211ENST00000528787 LMOD2Q6P5Q4 547 aa10.78□□□□□ -0.68
SSBP3-211ENST00000528787 SHPRHQ149N8 1683 aa10.78□□□□□ -0.68
SSBP3-211ENST00000528787 USP54Q70EL1 1684 aa10.78□□□□□ -0.68
SSBP3-211ENST00000528787 SPATA31A6Q5VVP1 1343 aa10.78□□□□□ -0.68
SSBP3-211ENST00000528787 USP31Q70CQ4 1352 aa10.77□□□□□ -0.68
SSBP3-211ENST00000528787 COL16A1Q07092 1604 aaPredicted RBP10.77□□□□□ -0.68
SSBP3-211ENST00000528787 SSH2Q76I76 1423 aa10.77□□□□□ -0.68
SSBP3-211ENST00000528787 ALS2Q96Q42 1657 aa10.77□□□□□ -0.69
SSBP3-211ENST00000528787 COL22A1Q8NFW1 1626 aaPredicted RBP10.76□□□□□ -0.69
SSBP3-211ENST00000528787 NLRP6P59044 892 aa10.76□□□□□ -0.69
SSBP3-211ENST00000528787 RALBP1Q15311 655 aa10.76□□□□□ -0.69
SSBP3-211ENST00000528787 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.76□□□□□ -0.69
SSBP3-211ENST00000528787 MED1Q15648 1581 aaPredicted RBP10.76□□□□□ -0.69
SSBP3-211ENST00000528787 ANP32CO43423 234 aa10.75□□□□□ -0.69
SSBP3-211ENST00000528787 KIF24Q5T7B8 1368 aa10.75□□□□□ -0.69
SSBP3-211ENST00000528787 PER1O15534 1290 aaPredicted RBP10.74□□□□□ -0.69
SSBP3-211ENST00000528787 MORC1Q86VD1 984 aa10.74□□□□□ -0.69
SSBP3-211ENST00000528787 ABCC6O95255 1503 aa10.74□□□□□ -0.69
SSBP3-211ENST00000528787 PIK3C2AO00443 1686 aa10.73□□□□□ -0.69
SSBP3-211ENST00000528787 FYB1O15117 783 aa10.73□□□□□ -0.69
SSBP3-211ENST00000528787 CARD14Q9BXL6 1004 aa10.73□□□□□ -0.69
SSBP3-211ENST00000528787 XPCQ01831 940 aaPredicted RBP10.72□□□□□ -0.69
SSBP3-211ENST00000528787 AMER1Q5JTC6 1135 aaPredicted RBP10.72□□□□□ -0.69
SSBP3-211ENST00000528787 USP19O94966 1318 aa10.72□□□□□ -0.69
SSBP3-211ENST00000528787 AATKQ6ZMQ8 1374 aa10.72□□□□□ -0.69
SSBP3-211ENST00000528787 PNPLA6Q8IY17 1366 aa10.72□□□□□ -0.69
SSBP3-211ENST00000528787 OVOS2A0A0J9YW53 1432 aa10.71□□□□□ -0.69
SSBP3-211ENST00000528787 SLIT3O75094 1523 aa10.71□□□□□ -0.69
SSBP3-211ENST00000528787 HSPA1LP34931 641 aa10.71□□□□□ -0.69
SSBP3-211ENST00000528787 OVOS2Q6IE36 1432 aa10.71□□□□□ -0.69
SSBP3-211ENST00000528787 CFAP53Q96M91 514 aa10.71□□□□□ -0.69
SSBP3-211ENST00000528787 RTL1A6NKG5 1358 aa10.7□□□□□ -0.7
SSBP3-211ENST00000528787 CPDO75976 1380 aa10.7□□□□□ -0.7
SSBP3-211ENST00000528787 GCP02774 474 aa10.7□□□□□ -0.7
SSBP3-211ENST00000528787 NME9Q86XW9 330 aa10.7□□□□□ -0.7
SSBP3-211ENST00000528787 MARF1Q9Y4F3 1742 aaKnown RBP10.7□□□□□ -0.7
SSBP3-211ENST00000528787 PHRF1Q9P1Y6 1649 aaKnown RBP10.69□□□□□ -0.7
SSBP3-211ENST00000528787 SMG6Q86US8 1419 aaKnown RBP10.69□□□□□ -0.7
SSBP3-211ENST00000528787 CC2D1BQ5T0F9 858 aaKnown RBP10.69□□□□□ -0.7
SSBP3-211ENST00000528787 MEX3CQ5U5Q3 659 aaKnown RBP10.69□□□□□ -0.7
SSBP3-211ENST00000528787 DIEXFQ68CQ4 756 aaKnown RBP10.69□□□□□ -0.7
SSBP3-211ENST00000528787 DDX17Q92841 729 aaKnown RBP10.69□□□□□ -0.7
SSBP3-211ENST00000528787 GGNBP2Q9H3C7 697 aa10.69□□□□□ -0.7
SSBP3-211ENST00000528787 MAP2P11137 1827 aaKnown RBP10.69□□□□□ -0.7
SSBP3-211ENST00000528787 ABCA3Q99758 1704 aa10.68□□□□□ -0.7
SSBP3-211ENST00000528787 BLMP54132 1417 aaPredicted RBP10.67□□□□□ -0.7
SSBP3-211ENST00000528787 LTN1O94822 1766 aa10.67□□□□□ -0.7
SSBP3-211ENST00000528787 COL14A1Q05707 1796 aaKnown RBP10.67□□□□□ -0.7
SSBP3-211ENST00000528787 CRYBG1Q9Y4K1 1723 aa10.67□□□□□ -0.7
SSBP3-211ENST00000528787 PARD3Q8TEW0 1356 aa10.67□□□□□ -0.7
SSBP3-211ENST00000528787 MYBBP1AQ9BQG0 1328 aaKnown RBP10.67□□□□□ -0.7
SSBP3-211ENST00000528787 AMPHP49418 695 aa10.67□□□□□ -0.7
SSBP3-211ENST00000528787 PRDM11Q9NQV5 511 aa10.67□□□□□ -0.7
SSBP3-211ENST00000528787 FAM208AQ9UK61 1670 aaKnown RBP10.66□□□□□ -0.7
SSBP3-211ENST00000528787 FLT4P35916 1363 aa10.66□□□□□ -0.7
SSBP3-211ENST00000528787 NUTM2GQ5VZR2 741 aa10.66□□□□□ -0.7
SSBP3-211ENST00000528787 PRKRIP1Q9H875 184 aaPredicted RBP10.66□□□□□ -0.7
SSBP3-211ENST00000528787 NUDCQ9Y266 331 aa10.66□□□□□ -0.7
SSBP3-211ENST00000528787 NWD2Q9ULI1 1742 aa10.66□□□□□ -0.7
SSBP3-211ENST00000528787 NFAT5O94916 1531 aa10.65□□□□□ -0.7
SSBP3-211ENST00000528787 ARHGEF25Q86VW2 580 aa10.65□□□□□ -0.7
SSBP3-211ENST00000528787 PNNQ9H307 717 aaKnown RBP10.65□□□□□ -0.7
SSBP3-211ENST00000528787 CDK12Q9NYV4 1490 aaPredicted RBP10.64□□□□□ -0.71
SSBP3-211ENST00000528787 NUTM2BA6NNL0 878 aaPredicted RBP10.63□□□□□ -0.71
SSBP3-211ENST00000528787 NUTM2EB1AL46 878 aaPredicted RBP10.63□□□□□ -0.71
SSBP3-211ENST00000528787 NEFMP07197 916 aa10.63□□□□□ -0.71
SSBP3-211ENST00000528787 EVA1CP58658 441 aa10.63□□□□□ -0.71
SSBP3-211ENST00000528787 NUTM2AQ8IVF1 878 aaPredicted RBP10.63□□□□□ -0.71
SSBP3-211ENST00000528787 IP6K1Q92551 441 aa10.63□□□□□ -0.71
SSBP3-211ENST00000528787 NGLY1Q96IV0 654 aa10.63□□□□□ -0.71
SSBP3-211ENST00000528787 INSRP06213 1382 aa10.63□□□□□ -0.71
SSBP3-211ENST00000528787 KIAA0232Q92628 1395 aa10.63□□□□□ -0.71
SSBP3-211ENST00000528787 PPM1GO15355 546 aaPredicted RBP10.62□□□□□ -0.71
SSBP3-211ENST00000528787 SOX12O15370 315 aa10.62□□□□□ -0.71
SSBP3-211ENST00000528787 PPP2R1AP30153 589 aa10.62□□□□□ -0.71
SSBP3-211ENST00000528787 TNNT2P45379 298 aaPredicted RBP10.62□□□□□ -0.71
SSBP3-211ENST00000528787 ZC3H6P61129 1189 aaKnown RBP10.62□□□□□ -0.71
SSBP3-211ENST00000528787 ZNF772Q68DY9 489 aaPredicted RBP10.62□□□□□ -0.71
SSBP3-211ENST00000528787 PLEKHG2Q9H7P9 1386 aa10.62□□□□□ -0.71
SSBP3-211ENST00000528787 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.61□□□□□ -0.71
SSBP3-211ENST00000528787 CCER2I3L3R5 266 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 265.7 ms