RNA–Protein interactions for RNA: ENST00000528521.1

CHID1-213, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-213ENST00000528521 NGDNQ8NEJ9 315 aaKnown RBP13.93□□□□□ -0.18
CHID1-213ENST00000528521 CARD11Q9BXL7 1154 aa13.93□□□□□ -0.18
CHID1-213ENST00000528521 MON2Q7Z3U7 1717 aa13.93□□□□□ -0.18
CHID1-213ENST00000528521 RGS12O14924 1447 aa13.92□□□□□ -0.18
CHID1-213ENST00000528521 SSH2Q76I76 1423 aa13.92□□□□□ -0.18
CHID1-213ENST00000528521 COL14A1Q05707 1796 aaKnown RBP13.92□□□□□ -0.18
CHID1-213ENST00000528521 SRPK2P78362 688 aaKnown RBP13.92□□□□□ -0.18
CHID1-213ENST00000528521 CABLES1Q8TDN4 633 aa13.92□□□□□ -0.18
CHID1-213ENST00000528521 NGLY1Q96IV0 654 aa13.92□□□□□ -0.18
CHID1-213ENST00000528521 GLI3P10071 1580 aa13.92□□□□□ -0.18
CHID1-213ENST00000528521 PIK3C2AO00443 1686 aa13.91□□□□□ -0.18
CHID1-213ENST00000528521 EVC2Q86UK5 1308 aa13.91□□□□□ -0.18
CHID1-213ENST00000528521 USP21Q9UK80 565 aa13.91□□□□□ -0.18
CHID1-213ENST00000528521 USP6P35125 1406 aa13.9□□□□□ -0.18
CHID1-213ENST00000528521 BRD4O60885 1362 aaPredicted RBP13.89□□□□□ -0.19
CHID1-213ENST00000528521 RXRBP28702 533 aa13.89□□□□□ -0.19
CHID1-213ENST00000528521 QTRT2Q9H974 415 aaKnown RBP13.89□□□□□ -0.19
CHID1-213ENST00000528521 TIMELESSQ9UNS1 1208 aa13.89□□□□□ -0.19
CHID1-213ENST00000528521 CPSF1Q10570 1443 aaKnown RBP13.89□□□□□ -0.19
CHID1-213ENST00000528521 USP54Q70EL1 1684 aa13.88□□□□□ -0.19
CHID1-213ENST00000528521 CD163L1Q9NR16 1453 aa13.88□□□□□ -0.19
CHID1-213ENST00000528521 ATAD2Q6PL18 1390 aa13.88□□□□□ -0.19
CHID1-213ENST00000528521 RBM6P78332 1123 aaKnown RBP13.88□□□□□ -0.19
CHID1-213ENST00000528521 LMOD2Q6P5Q4 547 aa13.88□□□□□ -0.19
CHID1-213ENST00000528521 TRPC5Q9UL62 973 aaPredicted RBP13.88□□□□□ -0.19
CHID1-213ENST00000528521 LMO7Q8WWI1 1683 aa13.88□□□□□ -0.19
CHID1-213ENST00000528521 SLIT3O75094 1523 aa13.87□□□□□ -0.19
CHID1-213ENST00000528521 TESK2Q96S53 571 aa13.87□□□□□ -0.19
CHID1-213ENST00000528521 CABP1Q9NZU7 370 aa13.87□□□□□ -0.19
CHID1-213ENST00000528521 USP19O94966 1318 aa13.87□□□□□ -0.19
CHID1-213ENST00000528521 PAK3O75914 559 aaPredicted RBP13.85□□□□□ -0.19
CHID1-213ENST00000528521 UNC5CLQ8IV45 518 aa13.85□□□□□ -0.19
CHID1-213ENST00000528521 USP47Q96K76 1375 aa13.84□□□□□ -0.19
CHID1-213ENST00000528521 FAM83GA6ND36 823 aa13.84□□□□□ -0.19
CHID1-213ENST00000528521 BRWD3Q6RI45 1802 aa13.84□□□□□ -0.19
CHID1-213ENST00000528521 ST20-MTHFSA0A0A6YYL1 179 aa13.83□□□□□ -0.2
CHID1-213ENST00000528521 PLEKHG5O94827 1062 aa13.83□□□□□ -0.2
CHID1-213ENST00000528521 HAP1P54257 671 aaPredicted RBP13.83□□□□□ -0.2
CHID1-213ENST00000528521 PUS7Q96PZ0 661 aaKnown RBP13.83□□□□□ -0.2
CHID1-213ENST00000528521 COL18A1P39060 1754 aa13.82□□□□□ -0.2
CHID1-213ENST00000528521 NUTM2GQ5VZR2 741 aa13.82□□□□□ -0.2
CHID1-213ENST00000528521 GJD4Q96KN9 370 aaPredicted RBP13.82□□□□□ -0.2
CHID1-213ENST00000528521 CPDO75976 1380 aa13.82□□□□□ -0.2
CHID1-213ENST00000528521 KIAA0232Q92628 1395 aa13.82□□□□□ -0.2
CHID1-213ENST00000528521 MYOM1P52179 1685 aa13.82□□□□□ -0.2
CHID1-213ENST00000528521 VPS72Q15906 364 aa13.81□□□□□ -0.2
CHID1-213ENST00000528521 ABTB2Q8N961 1025 aa13.81□□□□□ -0.2
CHID1-213ENST00000528521 THSD7AQ9UPZ6 1657 aa13.8□□□□□ -0.2
CHID1-213ENST00000528521 CAMTA1Q9Y6Y1 1673 aa13.8□□□□□ -0.2
CHID1-213ENST00000528521 TTC21BQ7Z4L5 1316 aa13.8□□□□□ -0.2
CHID1-213ENST00000528521 NFAT5O94916 1531 aa13.8□□□□□ -0.2
CHID1-213ENST00000528521 ZNF692Q9BU19 519 aaPredicted RBP13.79□□□□□ -0.2
CHID1-213ENST00000528521 BTG4Q9NY30 223 aa13.79□□□□□ -0.2
CHID1-213ENST00000528521 A0A1W2PP64 1363 aa13.79□□□□□ -0.2
CHID1-213ENST00000528521 KTN1Q86UP2 1357 aaKnown RBP13.79□□□□□ -0.2
CHID1-213ENST00000528521 NLRP13Q86W25 1043 aa13.78□□□□□ -0.2
CHID1-213ENST00000528521 CCER1Q8TC90 406 aaPredicted RBP13.78□□□□□ -0.2
CHID1-213ENST00000528521 PRDM11Q9NQV5 511 aa13.78□□□□□ -0.2
CHID1-213ENST00000528521 TTC21AQ8NDW8 1320 aa13.78□□□□□ -0.2
CHID1-213ENST00000528521 NINLQ9Y2I6 1382 aa13.78□□□□□ -0.2
CHID1-213ENST00000528521 ONECUT3O60422 494 aaPredicted RBP13.77□□□□□ -0.21
CHID1-213ENST00000528521 EDC4Q6P2E9 1401 aaKnown RBP13.77□□□□□ -0.21
CHID1-213ENST00000528521 UPF1Q92900 1129 aaKnown RBP eCLIP13.77□□□□□ -0.21
CHID1-213ENST00000528521 RGPD5Q99666 1765 aa13.76□□□□□ -0.21
CHID1-213ENST00000528521 USP31Q70CQ4 1352 aa13.76□□□□□ -0.21
CHID1-213ENST00000528521 GCP02774 474 aa13.76□□□□□ -0.21
CHID1-213ENST00000528521 ZC3H6P61129 1189 aaKnown RBP13.76□□□□□ -0.21
CHID1-213ENST00000528521 SLC12A5Q9H2X9 1139 aa13.76□□□□□ -0.21
CHID1-213ENST00000528521 WNK3Q9BYP7 1800 aa13.76□□□□□ -0.21
CHID1-213ENST00000528521 ABCC6O95255 1503 aa13.75□□□□□ -0.21
CHID1-213ENST00000528521 COL5A2P05997 1499 aaPredicted RBP13.75□□□□□ -0.21
CHID1-213ENST00000528521 SPATA31A5Q5VU36 1347 aa13.75□□□□□ -0.21
CHID1-213ENST00000528521 SPATA31A7Q8IWB4 1347 aa13.75□□□□□ -0.21
CHID1-213ENST00000528521 SLC24A1O60721 1099 aa13.75□□□□□ -0.21
CHID1-213ENST00000528521 CHRNA2Q15822 529 aa13.75□□□□□ -0.21
CHID1-213ENST00000528521 LTN1O94822 1766 aa13.75□□□□□ -0.21
CHID1-213ENST00000528521 OVOS2A0A0J9YW53 1432 aa13.74□□□□□ -0.21
CHID1-213ENST00000528521 OVOS2Q6IE36 1432 aa13.74□□□□□ -0.21
CHID1-213ENST00000528521 NLRP6P59044 892 aa13.74□□□□□ -0.21
CHID1-213ENST00000528521 AATKQ6ZMQ8 1374 aa13.72□□□□□ -0.21
CHID1-213ENST00000528521 ANKRD36BQ8N2N9 1353 aa13.72□□□□□ -0.21
CHID1-213ENST00000528521 SPATA31A1Q5TZJ5 1347 aa13.72□□□□□ -0.21
CHID1-213ENST00000528521 KIF20BQ96Q89 1820 aa13.72□□□□□ -0.21
CHID1-213ENST00000528521 TMF1P82094 1093 aa13.72□□□□□ -0.21
CHID1-213ENST00000528521 TMC1Q8TDI8 760 aa13.72□□□□□ -0.21
CHID1-213ENST00000528521 EP400Q96L91 3159 aa13.71□□□□□ -0.21
CHID1-213ENST00000528521 PARP4Q9UKK3 1724 aaKnown RBP13.71□□□□□ -0.21
CHID1-213ENST00000528521 HDGFL2Q7Z4V5 671 aaPredicted RBP13.71□□□□□ -0.21
CHID1-213ENST00000528521 NME9Q86XW9 330 aa13.71□□□□□ -0.21
CHID1-213ENST00000528521 SEPT12Q8IYM1 358 aa13.71□□□□□ -0.21
CHID1-213ENST00000528521 TERF2IPQ9NYB0 399 aa13.71□□□□□ -0.21
CHID1-213ENST00000528521 ZRANB1Q9UGI0 708 aa13.71□□□□□ -0.21
CHID1-213ENST00000528521 ARHGEF25Q86VW2 580 aa13.7□□□□□ -0.22
CHID1-213ENST00000528521 FAM98CQ17RN3 349 aaKnown RBP13.69□□□□□ -0.22
CHID1-213ENST00000528521 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.69□□□□□ -0.22
CHID1-213ENST00000528521 KCNH5Q8NCM2 988 aa13.69□□□□□ -0.22
CHID1-213ENST00000528521 CCDC9Q9Y3X0 531 aaKnown RBP13.69□□□□□ -0.22
CHID1-213ENST00000528521 LRRC37A3O60309 1634 aa13.68□□□□□ -0.22
CHID1-213ENST00000528521 LARP1Q6PKG0 1096 aaKnown RBP13.68□□□□□ -0.22
CHID1-213ENST00000528521 STRN4Q9NRL3 753 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms