RNA–Protein interactions for RNA: ENST00000528426.5

CHID1-212, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-212ENST00000528426 ST20-MTHFSA0A0A6YYL1 179 aa40.44■■■■■ 4.06
CHID1-212ENST00000528426 PUS7Q96PZ0 661 aaKnown RBP40.44■■■■■ 4.06
CHID1-212ENST00000528426 QTRT2Q9H974 415 aaKnown RBP40.42■■■■■ 4.06
CHID1-212ENST00000528426 TESK2Q96S53 571 aa40.41■■■■■ 4.06
CHID1-212ENST00000528426 USP21Q9UK80 565 aa40.41■■■■■ 4.06
CHID1-212ENST00000528426 ZNF692Q9BU19 519 aaPredicted RBP40.4■■■■■ 4.06
CHID1-212ENST00000528426 ALS2Q96Q42 1657 aa40.4■■■■■ 4.06
CHID1-212ENST00000528426 RXRBP28702 533 aa40.39■■■■■ 4.06
CHID1-212ENST00000528426 TRPC5Q9UL62 973 aaPredicted RBP40.34■■■■■ 4.05
CHID1-212ENST00000528426 USP47Q96K76 1375 aa40.34■■■■■ 4.05
CHID1-212ENST00000528426 PLEKHG5O94827 1062 aa40.33■■■■■ 4.05
CHID1-212ENST00000528426 ABTB2Q8N961 1025 aa40.33■■■■■ 4.05
CHID1-212ENST00000528426 RBM6P78332 1123 aaKnown RBP40.32■■■■■ 4.05
CHID1-212ENST00000528426 USP6P35125 1406 aa40.32■■■■■ 4.04
CHID1-212ENST00000528426 MARF1Q9Y4F3 1742 aaKnown RBP40.3■■■■■ 4.04
CHID1-212ENST00000528426 BCL9LQ86UU0 1499 aa40.3■■■■■ 4.04
CHID1-212ENST00000528426 SLIT2O94813 1529 aa40.27■■■■■ 4.04
CHID1-212ENST00000528426 FAM83GA6ND36 823 aa40.27■■■■■ 4.04
CHID1-212ENST00000528426 UNC5CLQ8IV45 518 aa40.27■■■■■ 4.04
CHID1-212ENST00000528426 CPSF1Q10570 1443 aaKnown RBP40.26■■■■■ 4.04
CHID1-212ENST00000528426 SSH2Q76I76 1423 aa40.26■■■■■ 4.04
CHID1-212ENST00000528426 NLRP13Q86W25 1043 aa40.26■■■■■ 4.04
CHID1-212ENST00000528426 NUTM2GQ5VZR2 741 aa40.24■■■■■ 4.03
CHID1-212ENST00000528426 ATRNO75882 1429 aa40.24■■■■■ 4.03
CHID1-212ENST00000528426 CDK12Q9NYV4 1490 aaPredicted RBP40.23■■■■■ 4.03
CHID1-212ENST00000528426 TMF1P82094 1093 aa40.22■■■■■ 4.03
CHID1-212ENST00000528426 ABCA3Q99758 1704 aa40.22■■■■■ 4.03
CHID1-212ENST00000528426 TMC1Q8TDI8 760 aa40.21■■■■■ 4.03
CHID1-212ENST00000528426 SLC12A5Q9H2X9 1139 aa40.2■■■■■ 4.03
CHID1-212ENST00000528426 USP19O94966 1318 aa40.19■■■■■ 4.02
CHID1-212ENST00000528426 TTC21BQ7Z4L5 1316 aa40.18■■■■■ 4.02
CHID1-212ENST00000528426 KTN1Q86UP2 1357 aaKnown RBP40.18■■■■■ 4.02
CHID1-212ENST00000528426 TTC21AQ8NDW8 1320 aa40.17■■■■■ 4.02
CHID1-212ENST00000528426 NINLQ9Y2I6 1382 aa40.16■■■■■ 4.02
CHID1-212ENST00000528426 NLRP6P59044 892 aa40.16■■■■■ 4.02
CHID1-212ENST00000528426 GJD4Q96KN9 370 aaPredicted RBP40.16■■■■■ 4.02
CHID1-212ENST00000528426 CDCA8Q53HL2 280 aa40.15■■■■■ 4.02
CHID1-212ENST00000528426 HDGFL2Q7Z4V5 671 aaPredicted RBP40.15■■■■■ 4.02
CHID1-212ENST00000528426 TERF2IPQ9NYB0 399 aa40.15■■■■■ 4.02
CHID1-212ENST00000528426 CRYBG1Q9Y4K1 1723 aa40.14■■■■■ 4.02
CHID1-212ENST00000528426 PRDM11Q9NQV5 511 aa40.14■■■■■ 4.02
CHID1-212ENST00000528426 GCP02774 474 aa40.13■■■■■ 4.01
CHID1-212ENST00000528426 VPS72Q15906 364 aa40.12■■■■■ 4.01
CHID1-212ENST00000528426 BTG4Q9NY30 223 aa40.11■■■■■ 4.01
CHID1-212ENST00000528426 CD163L1Q9NR16 1453 aa40.11■■■■■ 4.01
CHID1-212ENST00000528426 ZC3H6P61129 1189 aaKnown RBP40.1■■■■■ 4.01
CHID1-212ENST00000528426 KIAA0232Q92628 1395 aa40.1■■■■■ 4.01
CHID1-212ENST00000528426 TNKS1BP1Q9C0C2 1729 aaKnown RBP40.09■■■■■ 4.01
CHID1-212ENST00000528426 AKAP12Q02952 1782 aa40.09■■■■■ 4.01
CHID1-212ENST00000528426 CPDO75976 1380 aa40.08■■■■■ 4.01
CHID1-212ENST00000528426 NWD2Q9ULI1 1742 aa40.07■■■■■ 4
CHID1-212ENST00000528426 EIF4G2P78344 907 aaKnown RBP eCLIP40.06■■■■■ 48e-8■■■■■ 31.9
CHID1-212ENST00000528426 COL14A1Q05707 1796 aaKnown RBP40.05■■■■■ 4
CHID1-212ENST00000528426 PHRF1Q9P1Y6 1649 aaKnown RBP40.05■■■■■ 4
CHID1-212ENST00000528426 RGS12O14924 1447 aa40.03■■■■■ 4
CHID1-212ENST00000528426 A0A1W2PP64 1363 aa40.01■■■■■ 4
CHID1-212ENST00000528426 CHRNA2Q15822 529 aa40.01■■■■■ 4
CHID1-212ENST00000528426 PLCH1Q4KWH8 1693 aa40.01■■■■■ 4
CHID1-212ENST00000528426 EDC4Q6P2E9 1401 aaKnown RBP40■■■■□ 3.99
CHID1-212ENST00000528426 KCNH5Q8NCM2 988 aa40■■■■□ 3.99
CHID1-212ENST00000528426 SUGP2Q8IX01 1082 aaKnown RBP eCLIP39.99■■■■□ 3.99
CHID1-212ENST00000528426 USP31Q70CQ4 1352 aa39.98■■■■□ 3.99
CHID1-212ENST00000528426 NRKQ7Z2Y5 1582 aa39.98■■■■□ 3.99
CHID1-212ENST00000528426 MON2Q7Z3U7 1717 aa39.98■■■■□ 3.99
CHID1-212ENST00000528426 PIK3C2AO00443 1686 aa39.98■■■■□ 3.99
CHID1-212ENST00000528426 SLIT3O75094 1523 aa39.97■■■■□ 3.99
CHID1-212ENST00000528426 ONECUT3O60422 494 aaPredicted RBP39.97■■■■□ 3.99
CHID1-212ENST00000528426 CCDC9Q9Y3X0 531 aaKnown RBP39.97■■■■□ 3.99
CHID1-212ENST00000528426 HSPA5P11021 654 aaKnown RBP39.95■■■■□ 3.99
CHID1-212ENST00000528426 ANKRD36BQ8N2N9 1353 aa39.94■■■■□ 3.98
CHID1-212ENST00000528426 NME9Q86XW9 330 aa39.91■■■■□ 3.98
CHID1-212ENST00000528426 GLI3P10071 1580 aa39.91■■■■□ 3.98
CHID1-212ENST00000528426 SPATA31A5Q5VU36 1347 aa39.9■■■■□ 3.98
CHID1-212ENST00000528426 SPATA31A7Q8IWB4 1347 aa39.9■■■■□ 3.98
CHID1-212ENST00000528426 AATKQ6ZMQ8 1374 aa39.89■■■■□ 3.98
CHID1-212ENST00000528426 NRAPQ86VF7 1730 aa39.89■■■■□ 3.98
CHID1-212ENST00000528426 EVA1CP58658 441 aa39.89■■■■□ 3.98
CHID1-212ENST00000528426 ARHGEF25Q86VW2 580 aa39.88■■■■□ 3.97
CHID1-212ENST00000528426 ZRANB1Q9UGI0 708 aa39.88■■■■□ 3.97
CHID1-212ENST00000528426 STRN4Q9NRL3 753 aa39.85■■■■□ 3.97
CHID1-212ENST00000528426 CAMTA1Q9Y6Y1 1673 aa39.84■■■■□ 3.97
CHID1-212ENST00000528426 SEPT12Q8IYM1 358 aa39.83■■■■□ 3.97
CHID1-212ENST00000528426 UPF1Q92900 1129 aaKnown RBP eCLIP39.82■■■■□ 3.97
CHID1-212ENST00000528426 SPATA31A1Q5TZJ5 1347 aa39.81■■■■□ 3.96
CHID1-212ENST00000528426 LMO7Q8WWI1 1683 aa39.8■■■■□ 3.96
CHID1-212ENST00000528426 ZBTB7CA1YPR0 619 aa39.78■■■■□ 3.96
CHID1-212ENST00000528426 SOX12O15370 315 aa39.78■■■■□ 3.96
CHID1-212ENST00000528426 FAM98CQ17RN3 349 aaKnown RBP39.78■■■■□ 3.96
CHID1-212ENST00000528426 USP54Q70EL1 1684 aa39.77■■■■□ 3.96
CHID1-212ENST00000528426 OVOS2A0A0J9YW53 1432 aa39.76■■■■□ 3.96
CHID1-212ENST00000528426 OVOS2Q6IE36 1432 aa39.76■■■■□ 3.96
CHID1-212ENST00000528426 LARP1Q6PKG0 1096 aaKnown RBP39.76■■■■□ 3.96
CHID1-212ENST00000528426 NFAT5O94916 1531 aa39.75■■■■□ 3.95
CHID1-212ENST00000528426 COG3Q96JB2 828 aa39.75■■■■□ 3.95
CHID1-212ENST00000528426 AXIN2Q9Y2T1 843 aa39.75■■■■□ 3.95
CHID1-212ENST00000528426 FYB1O15117 783 aa39.73■■■■□ 3.95
CHID1-212ENST00000528426 COL5A2P05997 1499 aaPredicted RBP39.73■■■■□ 3.95
CHID1-212ENST00000528426 CARD14Q9BXL6 1004 aa39.72■■■■□ 3.95
CHID1-212ENST00000528426 BARGINQ6ZT62 677 aa39.71■■■■□ 3.95
CHID1-212ENST00000528426 THRAP3Q9Y2W1 955 aaKnown RBP39.71■■■■□ 3.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms