RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 BRD4O60885 1362 aaPredicted RBP33.07■■■□□ 2.88
PKP3-206ENST00000528036 ALS2Q96Q42 1657 aa33.07■■■□□ 2.88
PKP3-206ENST00000528036 FAM83GA6ND36 823 aa33.06■■■□□ 2.88
PKP3-206ENST00000528036 EVC2Q86UK5 1308 aa33.04■■■□□ 2.88
PKP3-206ENST00000528036 RALGAPBQ86X10 1494 aa33.04■■■□□ 2.88
PKP3-206ENST00000528036 NWD2Q9ULI1 1742 aa33.03■■■□□ 2.88
PKP3-206ENST00000528036 CCDC125Q86Z20 511 aa33.01■■■□□ 2.87
PKP3-206ENST00000528036 ABCA3Q99758 1704 aa33.01■■■□□ 2.87
PKP3-206ENST00000528036 TRPM1Q7Z4N2 1603 aa33.01■■■□□ 2.87
PKP3-206ENST00000528036 CABP2Q9NPB3 220 aa33■■■□□ 2.87
PKP3-206ENST00000528036 CCDC9Q9Y3X0 531 aaKnown RBP33■■■□□ 2.87
PKP3-206ENST00000528036 PPIP5K1Q6PFW1 1433 aa33■■■□□ 2.87
PKP3-206ENST00000528036 TOPAZ1Q8N9V7 1692 aa33■■■□□ 2.87
PKP3-206ENST00000528036 TONSLQ96HA7 1378 aa32.99■■■□□ 2.87
PKP3-206ENST00000528036 ONECUT3O60422 494 aaPredicted RBP32.98■■■□□ 2.87
PKP3-206ENST00000528036 PRDM11Q9NQV5 511 aa32.98■■■□□ 2.87
PKP3-206ENST00000528036 BTG4Q9NY30 223 aa32.98■■■□□ 2.87
PKP3-206ENST00000528036 ABTB2Q8N961 1025 aa32.96■■■□□ 2.87
PKP3-206ENST00000528036 QRICH2Q9H0J4 1663 aa32.95■■■□□ 2.87
PKP3-206ENST00000528036 COL14A1Q05707 1796 aaKnown RBP32.94■■■□□ 2.86
PKP3-206ENST00000528036 GLI3P10071 1580 aa32.94■■■□□ 2.86
PKP3-206ENST00000528036 PLCH1Q4KWH8 1693 aa32.94■■■□□ 2.86
PKP3-206ENST00000528036 NLRP13Q86W25 1043 aa32.93■■■□□ 2.86
PKP3-206ENST00000528036 SEPT12Q8IYM1 358 aa32.92■■■□□ 2.86
PKP3-206ENST00000528036 CABP1Q9NZU7 370 aa32.92■■■□□ 2.86
PKP3-206ENST00000528036 ZNF692Q9BU19 519 aaPredicted RBP32.9■■■□□ 2.86
PKP3-206ENST00000528036 CARD11Q9BXL7 1154 aa32.9■■■□□ 2.86
PKP3-206ENST00000528036 SBNO2Q9Y2G9 1366 aa32.89■■■□□ 2.86
PKP3-206ENST00000528036 KIAA0232Q92628 1395 aa32.87■■■□□ 2.85
PKP3-206ENST00000528036 USP19O94966 1318 aa32.86■■■□□ 2.85
PKP3-206ENST00000528036 NUTM2GQ5VZR2 741 aa32.86■■■□□ 2.85
PKP3-206ENST00000528036 CRYBG1Q9Y4K1 1723 aa32.85■■■□□ 2.85
PKP3-206ENST00000528036 USP6P35125 1406 aa32.85■■■□□ 2.85
PKP3-206ENST00000528036 CPDO75976 1380 aa32.83■■■□□ 2.85
PKP3-206ENST00000528036 SPATA31A5Q5VU36 1347 aa32.83■■■□□ 2.85
PKP3-206ENST00000528036 SPATA31A7Q8IWB4 1347 aa32.83■■■□□ 2.85
PKP3-206ENST00000528036 SLC24A1O60721 1099 aa32.83■■■□□ 2.85
PKP3-206ENST00000528036 ZC3H6P61129 1189 aaKnown RBP32.83■■■□□ 2.85
PKP3-206ENST00000528036 KRT27Q7Z3Y8 459 aa32.82■■■□□ 2.84
PKP3-206ENST00000528036 NRAPQ86VF7 1730 aa32.81■■■□□ 2.84
PKP3-206ENST00000528036 A0A0G2JS52 829 aa32.8■■■□□ 2.84
PKP3-206ENST00000528036 GCP02774 474 aa32.8■■■□□ 2.84
PKP3-206ENST00000528036 MYT1Q01538 1121 aa32.8■■■□□ 2.84
PKP3-206ENST00000528036 FAM98CQ17RN3 349 aaKnown RBP32.79■■■□□ 2.84
PKP3-206ENST00000528036 BLMP54132 1417 aaPredicted RBP32.78■■■□□ 2.84
PKP3-206ENST00000528036 PHRF1Q9P1Y6 1649 aaKnown RBP32.78■■■□□ 2.84
PKP3-206ENST00000528036 EVA1CP58658 441 aa32.78■■■□□ 2.84
PKP3-206ENST00000528036 NLRP6P59044 892 aa32.78■■■□□ 2.84
PKP3-206ENST00000528036 CHRNA2Q15822 529 aa32.78■■■□□ 2.84
PKP3-206ENST00000528036 SF3B2Q13435 895 aaKnown RBP32.77■■■□□ 2.84
PKP3-206ENST00000528036 PUS7Q96PZ0 661 aaKnown RBP32.76■■■□□ 2.83
PKP3-206ENST00000528036 SSH2Q76I76 1423 aa32.76■■■□□ 2.83
PKP3-206ENST00000528036 TTC21AQ8NDW8 1320 aa32.75■■■□□ 2.83
PKP3-206ENST00000528036 SPATA31A1Q5TZJ5 1347 aa32.74■■■□□ 2.83
PKP3-206ENST00000528036 STRN4Q9NRL3 753 aa32.73■■■□□ 2.83
PKP3-206ENST00000528036 NRKQ7Z2Y5 1582 aa32.71■■■□□ 2.83
PKP3-206ENST00000528036 TTC21BQ7Z4L5 1316 aa32.71■■■□□ 2.83
PKP3-206ENST00000528036 KCNH5Q8NCM2 988 aa32.7■■■□□ 2.83
PKP3-206ENST00000528036 CPSF1Q10570 1443 aaKnown RBP32.69■■■□□ 2.82
PKP3-206ENST00000528036 BARGINQ6ZT62 677 aa32.68■■■□□ 2.82
PKP3-206ENST00000528036 TIMELESSQ9UNS1 1208 aa32.68■■■□□ 2.82
PKP3-206ENST00000528036 THRAP3Q9Y2W1 955 aaKnown RBP32.67■■■□□ 2.82
PKP3-206ENST00000528036 KTN1Q86UP2 1357 aaKnown RBP32.67■■■□□ 2.82
PKP3-206ENST00000528036 ZRANB1Q9UGI0 708 aa32.66■■■□□ 2.82
PKP3-206ENST00000528036 CLSPNQ9HAW4 1339 aa32.66■■■□□ 2.82
PKP3-206ENST00000528036 BRWD3Q6RI45 1802 aa32.65■■■□□ 2.82
PKP3-206ENST00000528036 AATKQ6ZMQ8 1374 aa32.65■■■□□ 2.82
PKP3-206ENST00000528036 SLIT3O75094 1523 aa32.64■■■□□ 2.82
PKP3-206ENST00000528036 HDGFL2Q7Z4V5 671 aaPredicted RBP32.64■■■□□ 2.82
PKP3-206ENST00000528036 EP400Q96L91 3159 aa32.64■■■□□ 2.82
PKP3-206ENST00000528036 TCP11L2Q8N4U5 519 aa32.63■■■□□ 2.81
PKP3-206ENST00000528036 CAMTA1Q9Y6Y1 1673 aa32.62■■■□□ 2.81
PKP3-206ENST00000528036 TERF2IPQ9NYB0 399 aa32.62■■■□□ 2.81
PKP3-206ENST00000528036 LARP1Q6PKG0 1096 aaKnown RBP32.6■■■□□ 2.81
PKP3-206ENST00000528036 TMC1Q8TDI8 760 aa32.6■■■□□ 2.81
PKP3-206ENST00000528036 LMO7Q8WWI1 1683 aa32.59■■■□□ 2.81
PKP3-206ENST00000528036 NINLQ9Y2I6 1382 aa32.59■■■□□ 2.81
PKP3-206ENST00000528036 THSD7AQ9UPZ6 1657 aa32.59■■■□□ 2.81
PKP3-206ENST00000528036 BAG6P46379 1132 aa32.58■■■□□ 2.81
PKP3-206ENST00000528036 USP35Q9P2H5 1018 aa32.58■■■□□ 2.81
PKP3-206ENST00000528036 AKAP12Q02952 1782 aa32.58■■■□□ 2.81
PKP3-206ENST00000528036 COL5A2P05997 1499 aaPredicted RBP32.57■■■□□ 2.8
PKP3-206ENST00000528036 FAM196AQ6ZSG2 479 aa32.57■■■□□ 2.8
PKP3-206ENST00000528036 ST20-MTHFSA0A0A6YYL1 179 aa32.56■■■□□ 2.8
PKP3-206ENST00000528036 C11orf95C9JLR9 678 aaPredicted RBP32.56■■■□□ 2.8
PKP3-206ENST00000528036 ARHGEF25Q86VW2 580 aa32.56■■■□□ 2.8
PKP3-206ENST00000528036 PIK3C2AO00443 1686 aa32.56■■■□□ 2.8
PKP3-206ENST00000528036 PDE3BQ13370 1112 aa32.55■■■□□ 2.8
PKP3-206ENST00000528036 TESK2Q96S53 571 aa32.55■■■□□ 2.8
PKP3-206ENST00000528036 CRB1P82279 1406 aa32.54■■■□□ 2.8
PKP3-206ENST00000528036 ZBTB7CA1YPR0 619 aa32.54■■■□□ 2.8
PKP3-206ENST00000528036 USP31Q70CQ4 1352 aa32.54■■■□□ 2.8
PKP3-206ENST00000528036 SLC12A5Q9H2X9 1139 aa32.53■■■□□ 2.8
PKP3-206ENST00000528036 DEFB132Q7Z7B7 95 aa32.51■■■□□ 2.79
PKP3-206ENST00000528036 EDC4Q6P2E9 1401 aaKnown RBP32.51■■■□□ 2.79
PKP3-206ENST00000528036 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.49■■■□□ 2.79
PKP3-206ENST00000528036 TOM1L2Q6ZVM7 507 aa32.48■■■□□ 2.79
PKP3-206ENST00000528036 CDCA7Q9BWT1 371 aaPredicted RBP32.48■■■□□ 2.79
PKP3-206ENST00000528036 WDR17Q8IZU2 1322 aa32.48■■■□□ 2.79
PKP3-206ENST00000528036 CD163L1Q9NR16 1453 aa32.48■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms