RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 NME9Q86XW9 330 aa22.67■■□□□ 1.22
PCDHA6-202ENST00000527624 TBX22Q9Y458 520 aa22.67■■□□□ 1.22
PCDHA6-202ENST00000527624 RIMS1Q86UR5 1692 aaKnown RBP22.67■■□□□ 1.22
PCDHA6-202ENST00000527624 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.67■■□□□ 1.22
PCDHA6-202ENST00000527624 EDC4Q6P2E9 1401 aaKnown RBP22.67■■□□□ 1.22
PCDHA6-202ENST00000527624 IQSEC2Q5JU85 1478 aa22.67■■□□□ 1.22
PCDHA6-202ENST00000527624 TRMT2AQ8IZ69 625 aaKnown RBP22.67■■□□□ 1.22
PCDHA6-202ENST00000527624 COL3A1P02461 1466 aaPredicted RBP22.66■■□□□ 1.22
PCDHA6-202ENST00000527624 CDC42BPGQ6DT37 1551 aa22.66■■□□□ 1.22
PCDHA6-202ENST00000527624 E9PSI1 815 aa22.66■■□□□ 1.22
PCDHA6-202ENST00000527624 ZRANB1Q9UGI0 708 aa22.65■■□□□ 1.22
PCDHA6-202ENST00000527624 PPM1GO15355 546 aaPredicted RBP22.65■■□□□ 1.22
PCDHA6-202ENST00000527624 ANP32EQ9BTT0 268 aa22.65■■□□□ 1.22
PCDHA6-202ENST00000527624 CEP170BQ9Y4F5 1589 aaPredicted RBP22.64■■□□□ 1.22
PCDHA6-202ENST00000527624 ADGRB2O60241 1585 aa22.63■■□□□ 1.21
PCDHA6-202ENST00000527624 POLKQ9UBT6 870 aa22.62■■□□□ 1.21
PCDHA6-202ENST00000527624 FANCIQ9NVI1 1328 aa22.61■■□□□ 1.21
PCDHA6-202ENST00000527624 NKTRP30414 1462 aaKnown RBP22.61■■□□□ 1.21
PCDHA6-202ENST00000527624 DIAPH1O60610 1272 aaKnown RBP22.61■■□□□ 1.21
PCDHA6-202ENST00000527624 PNPLA6Q8IY17 1366 aa22.6■■□□□ 1.21
PCDHA6-202ENST00000527624 PTCH1Q13635 1447 aa22.59■■□□□ 1.21
PCDHA6-202ENST00000527624 C20orf194Q5TEA3 1177 aa22.59■■□□□ 1.21
PCDHA6-202ENST00000527624 PHF23Q9BUL5 403 aaPredicted RBP22.59■■□□□ 1.21
PCDHA6-202ENST00000527624 ZNF692Q9BU19 519 aaPredicted RBP22.58■■□□□ 1.21
PCDHA6-202ENST00000527624 COG3Q96JB2 828 aa22.58■■□□□ 1.2
PCDHA6-202ENST00000527624 EMILIN1Q9Y6C2 1016 aa22.58■■□□□ 1.2
PCDHA6-202ENST00000527624 DIP2AQ14689 1571 aa22.58■■□□□ 1.2
PCDHA6-202ENST00000527624 MON2Q7Z3U7 1717 aa22.58■■□□□ 1.2
PCDHA6-202ENST00000527624 ACEP12821 1306 aa22.57■■□□□ 1.2
PCDHA6-202ENST00000527624 PLEKHF1Q96S99 279 aa22.57■■□□□ 1.2
PCDHA6-202ENST00000527624 CRBNQ96SW2 442 aa22.57■■□□□ 1.2
PCDHA6-202ENST00000527624 ITSN1Q15811 1721 aa22.56■■□□□ 1.2
PCDHA6-202ENST00000527624 KCNA6P17658 529 aa22.56■■□□□ 1.2
PCDHA6-202ENST00000527624 AKAP12Q02952 1782 aa22.55■■□□□ 1.2
PCDHA6-202ENST00000527624 CCDC27Q2M243 656 aa22.55■■□□□ 1.2
PCDHA6-202ENST00000527624 PLEKHG3A1L390 1219 aa22.54■■□□□ 1.2
PCDHA6-202ENST00000527624 MAPK8IP3Q9UPT6 1336 aa22.54■■□□□ 1.2
PCDHA6-202ENST00000527624 ADAMTSL3P82987 1691 aa22.54■■□□□ 1.2
PCDHA6-202ENST00000527624 WDR63Q8IWG1 891 aa22.54■■□□□ 1.2
PCDHA6-202ENST00000527624 RRS1Q15050 365 aaKnown RBP22.53■■□□□ 1.2
PCDHA6-202ENST00000527624 TOPAZ1Q8N9V7 1692 aa22.53■■□□□ 1.2
PCDHA6-202ENST00000527624 BCAR3O75815 825 aa22.53■■□□□ 1.2
PCDHA6-202ENST00000527624 ANKLE2Q86XL3 938 aa22.53■■□□□ 1.2
PCDHA6-202ENST00000527624 TTC21BQ7Z4L5 1316 aa22.53■■□□□ 1.2
PCDHA6-202ENST00000527624 PMFBP1Q8TBY8 1022 aa22.52■■□□□ 1.2
PCDHA6-202ENST00000527624 XRN1Q8IZH2 1706 aaKnown RBP22.52■■□□□ 1.19
PCDHA6-202ENST00000527624 MSH5O43196 834 aa22.51■■□□□ 1.19
PCDHA6-202ENST00000527624 TMPOP42166 694 aaKnown RBP22.51■■□□□ 1.19
PCDHA6-202ENST00000527624 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.51■■□□□ 1.19
PCDHA6-202ENST00000527624 MAP2P11137 1827 aaKnown RBP22.5■■□□□ 1.19
PCDHA6-202ENST00000527624 AATKQ6ZMQ8 1374 aa22.5■■□□□ 1.19
PCDHA6-202ENST00000527624 USP6P35125 1406 aa22.5■■□□□ 1.19
PCDHA6-202ENST00000527624 NCBP3Q53F19 620 aaKnown RBP22.48■■□□□ 1.19
PCDHA6-202ENST00000527624 HMOX1P09601 288 aa22.47■■□□□ 1.19
PCDHA6-202ENST00000527624 CDK12Q9NYV4 1490 aaPredicted RBP22.47■■□□□ 1.19
PCDHA6-202ENST00000527624 PIK3R4Q99570 1358 aa22.47■■□□□ 1.19
PCDHA6-202ENST00000527624 NRKQ7Z2Y5 1582 aa22.47■■□□□ 1.19
PCDHA6-202ENST00000527624 FCHSD2O94868 740 aa22.47■■□□□ 1.19
PCDHA6-202ENST00000527624 PRKAR2BP31323 418 aa22.47■■□□□ 1.19
PCDHA6-202ENST00000527624 TRIM35Q9UPQ4 493 aa22.47■■□□□ 1.19
PCDHA6-202ENST00000527624 ZNF142P52746 1687 aaPredicted RBP22.46■■□□□ 1.19
PCDHA6-202ENST00000527624 RSPH6AQ9H0K4 717 aa22.46■■□□□ 1.19
PCDHA6-202ENST00000527624 LRRC7Q96NW7 1537 aa22.46■■□□□ 1.19
PCDHA6-202ENST00000527624 IL13P35225 146 aa22.46■■□□□ 1.19
PCDHA6-202ENST00000527624 PNNQ9H307 717 aaKnown RBP22.46■■□□□ 1.19
PCDHA6-202ENST00000527624 RIPK4P57078 832 aa22.45■■□□□ 1.18
PCDHA6-202ENST00000527624 NGDNQ8NEJ9 315 aaKnown RBP22.45■■□□□ 1.18
PCDHA6-202ENST00000527624 MYH16Q9H6N6 1097 aa22.45■■□□□ 1.18
PCDHA6-202ENST00000527624 RBM33Q96EV2 1170 aaKnown RBP22.44■■□□□ 1.18
PCDHA6-202ENST00000527624 SOX12O15370 315 aa22.43■■□□□ 1.18
PCDHA6-202ENST00000527624 TSR2Q969E8 191 aaKnown RBP22.43■■□□□ 1.18
PCDHA6-202ENST00000527624 OVOS2A0A0J9YW53 1432 aa22.43■■□□□ 1.18
PCDHA6-202ENST00000527624 OVOS2Q6IE36 1432 aa22.43■■□□□ 1.18
PCDHA6-202ENST00000527624 SSH2Q76I76 1423 aa22.42■■□□□ 1.18
PCDHA6-202ENST00000527624 RARSP54136 660 aaKnown RBP22.41■■□□□ 1.18
PCDHA6-202ENST00000527624 PHACTR3Q96KR7 559 aa22.41■■□□□ 1.18
PCDHA6-202ENST00000527624 RGPD8O14715 1765 aaPredicted RBP22.4■■□□□ 1.18
PCDHA6-202ENST00000527624 NEFMP07197 916 aa22.4■■□□□ 1.18
PCDHA6-202ENST00000527624 CANXP27824 592 aaKnown RBP22.39■■□□□ 1.18
PCDHA6-202ENST00000527624 BCL2L13Q9BXK5 485 aa22.39■■□□□ 1.17
PCDHA6-202ENST00000527624 SETD1BQ9UPS6 1966 aaKnown RBP22.39■■□□□ 1.17
PCDHA6-202ENST00000527624 FRAT1Q92837 279 aaPredicted RBP22.38■■□□□ 1.17
PCDHA6-202ENST00000527624 ANKARQ7Z5J8 1434 aa22.37■■□□□ 1.17
PCDHA6-202ENST00000527624 TTC21AQ8NDW8 1320 aa22.37■■□□□ 1.17
PCDHA6-202ENST00000527624 NPHP4O75161 1426 aaPredicted RBP22.35■■□□□ 1.17
PCDHA6-202ENST00000527624 CHD2O14647 1828 aaKnown RBP22.35■■□□□ 1.17
PCDHA6-202ENST00000527624 USP31Q70CQ4 1352 aa22.35■■□□□ 1.17
PCDHA6-202ENST00000527624 EIF4A2Q14240 407 aaKnown RBP22.35■■□□□ 1.17
PCDHA6-202ENST00000527624 EXOSC9Q06265 439 aaKnown RBP22.34■■□□□ 1.17
PCDHA6-202ENST00000527624 NFE2L2Q16236 605 aa22.34■■□□□ 1.17
PCDHA6-202ENST00000527624 PANK1Q8TE04 598 aa22.34■■□□□ 1.17
PCDHA6-202ENST00000527624 IL16Q14005 1332 aa22.34■■□□□ 1.17
PCDHA6-202ENST00000527624 HSP90AB2PQ58FF8 381 aa22.34■■□□□ 1.17
PCDHA6-202ENST00000527624 FMN2Q9NZ56 1722 aa22.33■■□□□ 1.17
PCDHA6-202ENST00000527624 NALCNQ8IZF0 1738 aa22.32■■□□□ 1.16
PCDHA6-202ENST00000527624 PDE3AQ14432 1141 aa22.32■■□□□ 1.16
PCDHA6-202ENST00000527624 THUMPD2Q9BTF0 503 aaKnown RBP22.32■■□□□ 1.16
PCDHA6-202ENST00000527624 NUTM2GQ5VZR2 741 aa22.31■■□□□ 1.16
PCDHA6-202ENST00000527624 AEBP1Q8IUX7 1158 aa22.31■■□□□ 1.16
PCDHA6-202ENST00000527624 MAP3K19Q56UN5 1328 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms