RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 ALS2Q96Q42 1657 aa24.85■■□□□ 1.57
NR1H3-228ENST00000525441 CDK12Q9NYV4 1490 aaPredicted RBP24.84■■□□□ 1.57
NR1H3-228ENST00000525441 TIMELESSQ9UNS1 1208 aa24.83■■□□□ 1.57
NR1H3-228ENST00000525441 SBNO2Q9Y2G9 1366 aa24.82■■□□□ 1.56
NR1H3-228ENST00000525441 ATRNO75882 1429 aa24.8■■□□□ 1.56
NR1H3-228ENST00000525441 CABP1Q9NZU7 370 aa24.8■■□□□ 1.56
NR1H3-228ENST00000525441 BCL9LQ86UU0 1499 aa24.8■■□□□ 1.56
NR1H3-228ENST00000525441 ABCA3Q99758 1704 aa24.79■■□□□ 1.56
NR1H3-228ENST00000525441 UNC5CLQ8IV45 518 aa24.79■■□□□ 1.56
NR1H3-228ENST00000525441 SLIT2O94813 1529 aa24.79■■□□□ 1.56
NR1H3-228ENST00000525441 BRD4O60885 1362 aaPredicted RBP24.79■■□□□ 1.56
NR1H3-228ENST00000525441 ATAD2Q6PL18 1390 aa24.79■■□□□ 1.56
NR1H3-228ENST00000525441 ABTB2Q8N961 1025 aa24.75■■□□□ 1.55
NR1H3-228ENST00000525441 CCER1Q8TC90 406 aaPredicted RBP24.74■■□□□ 1.55
NR1H3-228ENST00000525441 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.74■■□□□ 1.55
NR1H3-228ENST00000525441 RGS12O14924 1447 aa24.73■■□□□ 1.55
NR1H3-228ENST00000525441 FAM83GA6ND36 823 aa24.73■■□□□ 1.55
NR1H3-228ENST00000525441 NUTM2GQ5VZR2 741 aa24.73■■□□□ 1.55
NR1H3-228ENST00000525441 USP6P35125 1406 aa24.72■■□□□ 1.55
NR1H3-228ENST00000525441 SLC24A1O60721 1099 aa24.72■■□□□ 1.55
NR1H3-228ENST00000525441 GJD4Q96KN9 370 aaPredicted RBP24.72■■□□□ 1.55
NR1H3-228ENST00000525441 ZNF692Q9BU19 519 aaPredicted RBP24.72■■□□□ 1.55
NR1H3-228ENST00000525441 NWD2Q9ULI1 1742 aa24.7■■□□□ 1.54
NR1H3-228ENST00000525441 NLRP13Q86W25 1043 aa24.7■■□□□ 1.54
NR1H3-228ENST00000525441 PRDM11Q9NQV5 511 aa24.7■■□□□ 1.54
NR1H3-228ENST00000525441 CRYBG1Q9Y4K1 1723 aa24.69■■□□□ 1.54
NR1H3-228ENST00000525441 ST20-MTHFSA0A0A6YYL1 179 aa24.69■■□□□ 1.54
NR1H3-228ENST00000525441 PLCH1Q4KWH8 1693 aa24.69■■□□□ 1.54
NR1H3-228ENST00000525441 VPS72Q15906 364 aa24.68■■□□□ 1.54
NR1H3-228ENST00000525441 PUS7Q96PZ0 661 aaKnown RBP24.68■■□□□ 1.54
NR1H3-228ENST00000525441 COL14A1Q05707 1796 aaKnown RBP24.67■■□□□ 1.54
NR1H3-228ENST00000525441 BTG4Q9NY30 223 aa24.67■■□□□ 1.54
NR1H3-228ENST00000525441 USP19O94966 1318 aa24.66■■□□□ 1.54
NR1H3-228ENST00000525441 CCDC9Q9Y3X0 531 aaKnown RBP24.66■■□□□ 1.54
NR1H3-228ENST00000525441 PHRF1Q9P1Y6 1649 aaKnown RBP24.65■■□□□ 1.54
NR1H3-228ENST00000525441 TESK2Q96S53 571 aa24.65■■□□□ 1.54
NR1H3-228ENST00000525441 KIAA0232Q92628 1395 aa24.65■■□□□ 1.54
NR1H3-228ENST00000525441 USP47Q96K76 1375 aa24.65■■□□□ 1.54
NR1H3-228ENST00000525441 SSH2Q76I76 1423 aa24.64■■□□□ 1.54
NR1H3-228ENST00000525441 ZC3H6P61129 1189 aaKnown RBP24.64■■□□□ 1.54
NR1H3-228ENST00000525441 TMC1Q8TDI8 760 aa24.64■■□□□ 1.54
NR1H3-228ENST00000525441 CPSF1Q10570 1443 aaKnown RBP24.63■■□□□ 1.53
NR1H3-228ENST00000525441 NLRP6P59044 892 aa24.63■■□□□ 1.53
NR1H3-228ENST00000525441 KTN1Q86UP2 1357 aaKnown RBP24.63■■□□□ 1.53
NR1H3-228ENST00000525441 TTC21BQ7Z4L5 1316 aa24.62■■□□□ 1.53
NR1H3-228ENST00000525441 TTC21AQ8NDW8 1320 aa24.62■■□□□ 1.53
NR1H3-228ENST00000525441 GCP02774 474 aa24.61■■□□□ 1.53
NR1H3-228ENST00000525441 HDGFL2Q7Z4V5 671 aaPredicted RBP24.61■■□□□ 1.53
NR1H3-228ENST00000525441 GLI3P10071 1580 aa24.61■■□□□ 1.53
NR1H3-228ENST00000525441 AKAP12Q02952 1782 aa24.61■■□□□ 1.53
NR1H3-228ENST00000525441 NRKQ7Z2Y5 1582 aa24.6■■□□□ 1.53
NR1H3-228ENST00000525441 CPDO75976 1380 aa24.6■■□□□ 1.53
NR1H3-228ENST00000525441 CHRNA2Q15822 529 aa24.6■■□□□ 1.53
NR1H3-228ENST00000525441 UPF1Q92900 1129 aaKnown RBP eCLIP24.6■■□□□ 1.53
NR1H3-228ENST00000525441 NRAPQ86VF7 1730 aa24.59■■□□□ 1.53
NR1H3-228ENST00000525441 TERF2IPQ9NYB0 399 aa24.59■■□□□ 1.53
NR1H3-228ENST00000525441 NINLQ9Y2I6 1382 aa24.58■■□□□ 1.53
NR1H3-228ENST00000525441 TMF1P82094 1093 aa24.58■■□□□ 1.53
NR1H3-228ENST00000525441 SLC12A5Q9H2X9 1139 aa24.58■■□□□ 1.53
NR1H3-228ENST00000525441 PIK3C2AO00443 1686 aa24.56■■□□□ 1.52
NR1H3-228ENST00000525441 SLIT3O75094 1523 aa24.55■■□□□ 1.52
NR1H3-228ENST00000525441 CD163L1Q9NR16 1453 aa24.54■■□□□ 1.52
NR1H3-228ENST00000525441 ONECUT3O60422 494 aaPredicted RBP24.54■■□□□ 1.52
NR1H3-228ENST00000525441 CDCA8Q53HL2 280 aa24.54■■□□□ 1.52
NR1H3-228ENST00000525441 SEPT12Q8IYM1 358 aa24.54■■□□□ 1.52
NR1H3-228ENST00000525441 MON2Q7Z3U7 1717 aa24.54■■□□□ 1.52
NR1H3-228ENST00000525441 SPATA31A5Q5VU36 1347 aa24.54■■□□□ 1.52
NR1H3-228ENST00000525441 SPATA31A7Q8IWB4 1347 aa24.54■■□□□ 1.52
NR1H3-228ENST00000525441 EVA1CP58658 441 aa24.53■■□□□ 1.52
NR1H3-228ENST00000525441 KCNH5Q8NCM2 988 aa24.53■■□□□ 1.52
NR1H3-228ENST00000525441 STRN4Q9NRL3 753 aa24.53■■□□□ 1.52
NR1H3-228ENST00000525441 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.52■■□□□ 1.52
NR1H3-228ENST00000525441 EDC4Q6P2E9 1401 aaKnown RBP24.52■■□□□ 1.52
NR1H3-228ENST00000525441 A0A0G2JS52 829 aa24.51■■□□□ 1.51
NR1H3-228ENST00000525441 MYT1Q01538 1121 aa24.51■■□□□ 1.51
NR1H3-228ENST00000525441 A0A1W2PP64 1363 aa24.51■■□□□ 1.51
NR1H3-228ENST00000525441 ZBTB7CA1YPR0 619 aa24.5■■□□□ 1.51
NR1H3-228ENST00000525441 FAM98CQ17RN3 349 aaKnown RBP24.5■■□□□ 1.51
NR1H3-228ENST00000525441 SPATA31A1Q5TZJ5 1347 aa24.48■■□□□ 1.51
NR1H3-228ENST00000525441 AATKQ6ZMQ8 1374 aa24.48■■□□□ 1.51
NR1H3-228ENST00000525441 USP31Q70CQ4 1352 aa24.48■■□□□ 1.51
NR1H3-228ENST00000525441 CAMTA1Q9Y6Y1 1673 aa24.47■■□□□ 1.51
NR1H3-228ENST00000525441 LMO7Q8WWI1 1683 aa24.46■■□□□ 1.51
NR1H3-228ENST00000525441 NME9Q86XW9 330 aa24.46■■□□□ 1.51
NR1H3-228ENST00000525441 SOX12O15370 315 aa24.45■■□□□ 1.5
NR1H3-228ENST00000525441 KRT27Q7Z3Y8 459 aa24.45■■□□□ 1.5
NR1H3-228ENST00000525441 ARHGEF25Q86VW2 580 aa24.44■■□□□ 1.5
NR1H3-228ENST00000525441 ANKRD36BQ8N2N9 1353 aa24.43■■□□□ 1.5
NR1H3-228ENST00000525441 LARP1Q6PKG0 1096 aaKnown RBP24.43■■□□□ 1.5
NR1H3-228ENST00000525441 CCDC125Q86Z20 511 aa24.43■■□□□ 1.5
NR1H3-228ENST00000525441 ZRANB1Q9UGI0 708 aa24.43■■□□□ 1.5
NR1H3-228ENST00000525441 COL5A2P05997 1499 aaPredicted RBP24.43■■□□□ 1.5
NR1H3-228ENST00000525441 EIF4G2P78344 907 aaKnown RBP eCLIP24.42■■□□□ 1.5
NR1H3-228ENST00000525441 USP35Q9P2H5 1018 aa24.42■■□□□ 1.5
NR1H3-228ENST00000525441 BRWD3Q6RI45 1802 aa24.42■■□□□ 1.5
NR1H3-228ENST00000525441 NFAT5O94916 1531 aa24.4■■□□□ 1.5
NR1H3-228ENST00000525441 USP54Q70EL1 1684 aa24.4■■□□□ 1.5
NR1H3-228ENST00000525441 BARGINQ6ZT62 677 aa24.4■■□□□ 1.5
NR1H3-228ENST00000525441 TCP11L2Q8N4U5 519 aa24.4■■□□□ 1.5
NR1H3-228ENST00000525441 THRAP3Q9Y2W1 955 aaKnown RBP24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms