RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 NUDT16Q96DE0 195 aaKnown RBP13.64□□□□□ -0.23
SF3B2-204ENST00000525207 SIN3AQ96ST3 1273 aa13.64□□□□□ -0.23
SF3B2-204ENST00000525207 CENPJQ9HC77 1338 aaPredicted RBP13.64□□□□□ -0.23
SF3B2-204ENST00000525207 UNC5CLQ8IV45 518 aa13.63□□□□□ -0.23
SF3B2-204ENST00000525207 NGDNQ8NEJ9 315 aaKnown RBP13.63□□□□□ -0.23
SF3B2-204ENST00000525207 GJD4Q96KN9 370 aaPredicted RBP13.62□□□□□ -0.23
SF3B2-204ENST00000525207 CDK19Q9BWU1 502 aa13.62□□□□□ -0.23
SF3B2-204ENST00000525207 EP400Q96L91 3159 aa13.61□□□□□ -0.23
SF3B2-204ENST00000525207 ROCK2O75116 1388 aaKnown RBP13.61□□□□□ -0.23
SF3B2-204ENST00000525207 PPIP5K1Q6PFW1 1433 aa13.61□□□□□ -0.23
SF3B2-204ENST00000525207 PLEKHG5O94827 1062 aa13.6□□□□□ -0.23
SF3B2-204ENST00000525207 CCDC61Q9Y6R9 512 aa13.6□□□□□ -0.23
SF3B2-204ENST00000525207 AKAP12Q02952 1782 aa13.59□□□□□ -0.23
SF3B2-204ENST00000525207 ACEP12821 1306 aa13.59□□□□□ -0.23
SF3B2-204ENST00000525207 PLEKHG3A1L390 1219 aa13.58□□□□□ -0.24
SF3B2-204ENST00000525207 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.24
SF3B2-204ENST00000525207 NEUROD1Q13562 356 aa13.58□□□□□ -0.24
SF3B2-204ENST00000525207 VPS72Q15906 364 aa13.58□□□□□ -0.24
SF3B2-204ENST00000525207 LMO7Q8WWI1 1683 aa13.58□□□□□ -0.24
SF3B2-204ENST00000525207 THSD7AQ9UPZ6 1657 aa13.58□□□□□ -0.24
SF3B2-204ENST00000525207 PIK3C2AO00443 1686 aa13.57□□□□□ -0.24
SF3B2-204ENST00000525207 SRPK2P78362 688 aaKnown RBP13.57□□□□□ -0.24
SF3B2-204ENST00000525207 USP6P35125 1406 aa13.56□□□□□ -0.24
SF3B2-204ENST00000525207 FAM83GA6ND36 823 aa13.56□□□□□ -0.24
SF3B2-204ENST00000525207 PPP4R3CPQ6ZMV5 832 aa13.56□□□□□ -0.24
SF3B2-204ENST00000525207 SBNO2Q9Y2G9 1366 aa13.56□□□□□ -0.24
SF3B2-204ENST00000525207 MON2Q7Z3U7 1717 aa13.56□□□□□ -0.24
SF3B2-204ENST00000525207 NBPF8Q3BBV2 869 aa13.55□□□□□ -0.24
SF3B2-204ENST00000525207 CABP2Q9NPB3 220 aa13.55□□□□□ -0.24
SF3B2-204ENST00000525207 USP19O94966 1318 aa13.55□□□□□ -0.24
SF3B2-204ENST00000525207 BRD4O60885 1362 aaPredicted RBP13.55□□□□□ -0.24
SF3B2-204ENST00000525207 KIAA0232Q92628 1395 aa13.55□□□□□ -0.24
SF3B2-204ENST00000525207 TONSLQ96HA7 1378 aa13.55□□□□□ -0.24
SF3B2-204ENST00000525207 SLIT3O75094 1523 aa13.54□□□□□ -0.24
SF3B2-204ENST00000525207 PRDM11Q9NQV5 511 aa13.54□□□□□ -0.24
SF3B2-204ENST00000525207 BTG4Q9NY30 223 aa13.54□□□□□ -0.24
SF3B2-204ENST00000525207 CCDC9Q9Y3X0 531 aaKnown RBP13.53□□□□□ -0.24
SF3B2-204ENST00000525207 EVC2Q86UK5 1308 aa13.53□□□□□ -0.24
SF3B2-204ENST00000525207 SSH2Q76I76 1423 aa13.53□□□□□ -0.24
SF3B2-204ENST00000525207 TRIM26Q12899 539 aaPredicted RBP13.52□□□□□ -0.25
SF3B2-204ENST00000525207 SEPT12Q8IYM1 358 aa13.52□□□□□ -0.25
SF3B2-204ENST00000525207 CPDO75976 1380 aa13.52□□□□□ -0.25
SF3B2-204ENST00000525207 BLMP54132 1417 aaPredicted RBP13.52□□□□□ -0.25
SF3B2-204ENST00000525207 USP54Q70EL1 1684 aa13.52□□□□□ -0.25
SF3B2-204ENST00000525207 ONECUT3O60422 494 aaPredicted RBP13.51□□□□□ -0.25
SF3B2-204ENST00000525207 NUTM2GQ5VZR2 741 aa13.51□□□□□ -0.25
SF3B2-204ENST00000525207 RGPD1P0DJD0 1748 aa13.5□□□□□ -0.25
SF3B2-204ENST00000525207 CAMTA1Q9Y6Y1 1673 aa13.5□□□□□ -0.25
SF3B2-204ENST00000525207 SPATA31A5Q5VU36 1347 aa13.5□□□□□ -0.25
SF3B2-204ENST00000525207 SPATA31A7Q8IWB4 1347 aa13.5□□□□□ -0.25
SF3B2-204ENST00000525207 WNK3Q9BYP7 1800 aa13.49□□□□□ -0.25
SF3B2-204ENST00000525207 CHRNA2Q15822 529 aa13.49□□□□□ -0.25
SF3B2-204ENST00000525207 ABTB2Q8N961 1025 aa13.49□□□□□ -0.25
SF3B2-204ENST00000525207 CABP1Q9NZU7 370 aa13.49□□□□□ -0.25
SF3B2-204ENST00000525207 TNS1Q9HBL0 1735 aaKnown RBP13.49□□□□□ -0.25
SF3B2-204ENST00000525207 CPSF1Q10570 1443 aaKnown RBP13.48□□□□□ -0.25
SF3B2-204ENST00000525207 COL18A1P39060 1754 aa13.48□□□□□ -0.25
SF3B2-204ENST00000525207 FAM98CQ17RN3 349 aaKnown RBP13.48□□□□□ -0.25
SF3B2-204ENST00000525207 COL5A2P05997 1499 aaPredicted RBP13.48□□□□□ -0.25
SF3B2-204ENST00000525207 ZC3H6P61129 1189 aaKnown RBP13.47□□□□□ -0.25
SF3B2-204ENST00000525207 KRT27Q7Z3Y8 459 aa13.47□□□□□ -0.25
SF3B2-204ENST00000525207 NLRP13Q86W25 1043 aa13.47□□□□□ -0.25
SF3B2-204ENST00000525207 CCDC125Q86Z20 511 aa13.47□□□□□ -0.25
SF3B2-204ENST00000525207 CARD11Q9BXL7 1154 aa13.47□□□□□ -0.25
SF3B2-204ENST00000525207 PARP4Q9UKK3 1724 aaKnown RBP13.47□□□□□ -0.25
SF3B2-204ENST00000525207 SPATA31A1Q5TZJ5 1347 aa13.46□□□□□ -0.25
SF3B2-204ENST00000525207 NFAT5O94916 1531 aa13.46□□□□□ -0.25
SF3B2-204ENST00000525207 A0A0G2JS52 829 aa13.46□□□□□ -0.25
SF3B2-204ENST00000525207 MYT1Q01538 1121 aa13.46□□□□□ -0.25
SF3B2-204ENST00000525207 CD163L1Q9NR16 1453 aa13.46□□□□□ -0.25
SF3B2-204ENST00000525207 ABCC6O95255 1503 aa13.45□□□□□ -0.26
SF3B2-204ENST00000525207 GCP02774 474 aa13.45□□□□□ -0.26
SF3B2-204ENST00000525207 LRRC37A3O60309 1634 aa13.44□□□□□ -0.26
SF3B2-204ENST00000525207 STRN4Q9NRL3 753 aa13.44□□□□□ -0.26
SF3B2-204ENST00000525207 TTC21AQ8NDW8 1320 aa13.43□□□□□ -0.26
SF3B2-204ENST00000525207 RGPD5Q99666 1765 aa13.43□□□□□ -0.26
SF3B2-204ENST00000525207 NLRP6P59044 892 aa13.43□□□□□ -0.26
SF3B2-204ENST00000525207 AATKQ6ZMQ8 1374 aa13.43□□□□□ -0.26
SF3B2-204ENST00000525207 KTN1Q86UP2 1357 aaKnown RBP13.43□□□□□ -0.26
SF3B2-204ENST00000525207 TTC21BQ7Z4L5 1316 aa13.42□□□□□ -0.26
SF3B2-204ENST00000525207 LTN1O94822 1766 aa13.42□□□□□ -0.26
SF3B2-204ENST00000525207 DISP2A7MBM2 1401 aa13.41□□□□□ -0.26
SF3B2-204ENST00000525207 CRB1P82279 1406 aa13.41□□□□□ -0.26
SF3B2-204ENST00000525207 ZNF692Q9BU19 519 aaPredicted RBP13.41□□□□□ -0.26
SF3B2-204ENST00000525207 LARP1Q6PKG0 1096 aaKnown RBP13.4□□□□□ -0.26
SF3B2-204ENST00000525207 BARGINQ6ZT62 677 aa13.4□□□□□ -0.26
SF3B2-204ENST00000525207 EDC4Q6P2E9 1401 aaKnown RBP13.39□□□□□ -0.27
SF3B2-204ENST00000525207 PEAK1Q9H792 1746 aa13.39□□□□□ -0.27
SF3B2-204ENST00000525207 SF3B2Q13435 895 aaKnown RBP13.39□□□□□ -0.27
SF3B2-204ENST00000525207 DEFB132Q7Z7B7 95 aa13.39□□□□□ -0.27
SF3B2-204ENST00000525207 A0A1W2PP64 1363 aa13.39□□□□□ -0.27
SF3B2-204ENST00000525207 NINLQ9Y2I6 1382 aa13.39□□□□□ -0.27
SF3B2-204ENST00000525207 RREB1Q92766 1687 aa13.38□□□□□ -0.27
SF3B2-204ENST00000525207 USP31Q70CQ4 1352 aa13.38□□□□□ -0.27
SF3B2-204ENST00000525207 EVA1CP58658 441 aa13.38□□□□□ -0.27
SF3B2-204ENST00000525207 TCP11L2Q8N4U5 519 aa13.38□□□□□ -0.27
SF3B2-204ENST00000525207 TESK2Q96S53 571 aa13.38□□□□□ -0.27
SF3B2-204ENST00000525207 USP35Q9P2H5 1018 aa13.38□□□□□ -0.27
SF3B2-204ENST00000525207 OVOS2A0A0J9YW53 1432 aa13.38□□□□□ -0.27
SF3B2-204ENST00000525207 OVOS2Q6IE36 1432 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms