RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 TRPC5Q9UL62 973 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC4-205ENST00000525079 POLR3AO14802 1390 aaPredicted RBP18.27■□□□□ 0.51
TRAPPC4-205ENST00000525079 BCL9LQ86UU0 1499 aa18.26■□□□□ 0.51
TRAPPC4-205ENST00000525079 CABP1Q9NZU7 370 aa18.26■□□□□ 0.51
TRAPPC4-205ENST00000525079 ATRNO75882 1429 aa18.23■□□□□ 0.51
TRAPPC4-205ENST00000525079 FAM83GA6ND36 823 aa18.23■□□□□ 0.51
TRAPPC4-205ENST00000525079 SLIT2O94813 1529 aa18.23■□□□□ 0.51
TRAPPC4-205ENST00000525079 RGS12O14924 1447 aa18.23■□□□□ 0.51
TRAPPC4-205ENST00000525079 UNC5CLQ8IV45 518 aa18.22■□□□□ 0.51
TRAPPC4-205ENST00000525079 CDK12Q9NYV4 1490 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC4-205ENST00000525079 PLCH1Q4KWH8 1693 aa18.2■□□□□ 0.5
TRAPPC4-205ENST00000525079 ABTB2Q8N961 1025 aa18.2■□□□□ 0.5
TRAPPC4-205ENST00000525079 CRYBG1Q9Y4K1 1723 aa18.2■□□□□ 0.5
TRAPPC4-205ENST00000525079 GJD4Q96KN9 370 aaPredicted RBP18.19■□□□□ 0.5
TRAPPC4-205ENST00000525079 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.18■□□□□ 0.5
TRAPPC4-205ENST00000525079 CCER1Q8TC90 406 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC4-205ENST00000525079 ZC3H6P61129 1189 aaKnown RBP18.17■□□□□ 0.5
TRAPPC4-205ENST00000525079 BTG4Q9NY30 223 aa18.17■□□□□ 0.5
TRAPPC4-205ENST00000525079 CCDC9Q9Y3X0 531 aaKnown RBP18.17■□□□□ 0.5
TRAPPC4-205ENST00000525079 PHRF1Q9P1Y6 1649 aaKnown RBP18.16■□□□□ 0.5
TRAPPC4-205ENST00000525079 ST20-MTHFSA0A0A6YYL1 179 aa18.16■□□□□ 0.5
TRAPPC4-205ENST00000525079 CLSPNQ9HAW4 1339 aa18.16■□□□□ 0.5
TRAPPC4-205ENST00000525079 SBNO2Q9Y2G9 1366 aa18.16■□□□□ 0.5
TRAPPC4-205ENST00000525079 USP6P35125 1406 aa18.15■□□□□ 0.5
TRAPPC4-205ENST00000525079 CHRNA2Q15822 529 aa18.15■□□□□ 0.5
TRAPPC4-205ENST00000525079 PRDM11Q9NQV5 511 aa18.15■□□□□ 0.5
TRAPPC4-205ENST00000525079 ATAD2Q6PL18 1390 aa18.15■□□□□ 0.5
TRAPPC4-205ENST00000525079 NWD2Q9ULI1 1742 aa18.15■□□□□ 0.5
TRAPPC4-205ENST00000525079 COL14A1Q05707 1796 aaKnown RBP18.14■□□□□ 0.5
TRAPPC4-205ENST00000525079 GLI3P10071 1580 aa18.14■□□□□ 0.49
TRAPPC4-205ENST00000525079 VPS72Q15906 364 aa18.14■□□□□ 0.49
TRAPPC4-205ENST00000525079 NLRP13Q86W25 1043 aa18.14■□□□□ 0.49
TRAPPC4-205ENST00000525079 UPF1Q92900 1129 aaKnown RBP eCLIP18.14■□□□□ 0.49
TRAPPC4-205ENST00000525079 KIAA0232Q92628 1395 aa18.14■□□□□ 0.49
TRAPPC4-205ENST00000525079 TMC1Q8TDI8 760 aa18.13■□□□□ 0.49
TRAPPC4-205ENST00000525079 NLRP6P59044 892 aa18.12■□□□□ 0.49
TRAPPC4-205ENST00000525079 ZNF692Q9BU19 519 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC4-205ENST00000525079 TIMELESSQ9UNS1 1208 aa18.12■□□□□ 0.49
TRAPPC4-205ENST00000525079 NRAPQ86VF7 1730 aa18.12■□□□□ 0.49
TRAPPC4-205ENST00000525079 AKAP12Q02952 1782 aa18.12■□□□□ 0.49
TRAPPC4-205ENST00000525079 TESK2Q96S53 571 aa18.11■□□□□ 0.49
TRAPPC4-205ENST00000525079 USP19O94966 1318 aa18.11■□□□□ 0.49
TRAPPC4-205ENST00000525079 BRD4O60885 1362 aaPredicted RBP18.11■□□□□ 0.49
TRAPPC4-205ENST00000525079 SSH2Q76I76 1423 aa18.11■□□□□ 0.49
TRAPPC4-205ENST00000525079 KTN1Q86UP2 1357 aaKnown RBP18.1■□□□□ 0.49
TRAPPC4-205ENST00000525079 TTC21BQ7Z4L5 1316 aa18.1■□□□□ 0.49
TRAPPC4-205ENST00000525079 GCP02774 474 aa18.1■□□□□ 0.49
TRAPPC4-205ENST00000525079 SLC12A5Q9H2X9 1139 aa18.1■□□□□ 0.49
TRAPPC4-205ENST00000525079 NRKQ7Z2Y5 1582 aa18.09■□□□□ 0.49
TRAPPC4-205ENST00000525079 CPSF1Q10570 1443 aaKnown RBP18.09■□□□□ 0.49
TRAPPC4-205ENST00000525079 USP47Q96K76 1375 aa18.09■□□□□ 0.49
TRAPPC4-205ENST00000525079 ZBTB7CA1YPR0 619 aa18.09■□□□□ 0.49
TRAPPC4-205ENST00000525079 SEPT12Q8IYM1 358 aa18.08■□□□□ 0.48
TRAPPC4-205ENST00000525079 STRN4Q9NRL3 753 aa18.08■□□□□ 0.48
TRAPPC4-205ENST00000525079 PIK3C2AO00443 1686 aa18.08■□□□□ 0.48
TRAPPC4-205ENST00000525079 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.07■□□□□ 0.48
TRAPPC4-205ENST00000525079 A0A0G2JS52 829 aa18.06■□□□□ 0.48
TRAPPC4-205ENST00000525079 MYT1Q01538 1121 aa18.06■□□□□ 0.48
TRAPPC4-205ENST00000525079 FAM98CQ17RN3 349 aaKnown RBP18.06■□□□□ 0.48
TRAPPC4-205ENST00000525079 CD163L1Q9NR16 1453 aa18.06■□□□□ 0.48
TRAPPC4-205ENST00000525079 BRWD3Q6RI45 1802 aa18.05■□□□□ 0.48
TRAPPC4-205ENST00000525079 SOX12O15370 315 aa18.05■□□□□ 0.48
TRAPPC4-205ENST00000525079 EVA1CP58658 441 aa18.05■□□□□ 0.48
TRAPPC4-205ENST00000525079 HDGFL2Q7Z4V5 671 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC4-205ENST00000525079 ZRANB1Q9UGI0 708 aa18.05■□□□□ 0.48
TRAPPC4-205ENST00000525079 MON2Q7Z3U7 1717 aa18.05■□□□□ 0.48
TRAPPC4-205ENST00000525079 SPATA31A5Q5VU36 1347 aa18.04■□□□□ 0.48
TRAPPC4-205ENST00000525079 SPATA31A7Q8IWB4 1347 aa18.04■□□□□ 0.48
TRAPPC4-205ENST00000525079 TTC21AQ8NDW8 1320 aa18.04■□□□□ 0.48
TRAPPC4-205ENST00000525079 PUS7Q96PZ0 661 aaKnown RBP18.04■□□□□ 0.48
TRAPPC4-205ENST00000525079 CPDO75976 1380 aa18.04■□□□□ 0.48
TRAPPC4-205ENST00000525079 SLIT3O75094 1523 aa18.03■□□□□ 0.48
TRAPPC4-205ENST00000525079 CAMTA1Q9Y6Y1 1673 aa18.03■□□□□ 0.48
TRAPPC4-205ENST00000525079 ONECUT3O60422 494 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC4-205ENST00000525079 SLC24A1O60721 1099 aa18.02■□□□□ 0.48
TRAPPC4-205ENST00000525079 TMF1P82094 1093 aa18.02■□□□□ 0.48
TRAPPC4-205ENST00000525079 NME9Q86XW9 330 aa18.02■□□□□ 0.48
TRAPPC4-205ENST00000525079 TERF2IPQ9NYB0 399 aa18.02■□□□□ 0.48
TRAPPC4-205ENST00000525079 USP35Q9P2H5 1018 aa18.02■□□□□ 0.48
TRAPPC4-205ENST00000525079 LMO7Q8WWI1 1683 aa18.01■□□□□ 0.47
TRAPPC4-205ENST00000525079 A0A1W2PP64 1363 aa18.01■□□□□ 0.47
TRAPPC4-205ENST00000525079 SPATA31A1Q5TZJ5 1347 aa18■□□□□ 0.47
TRAPPC4-205ENST00000525079 LARP1Q6PKG0 1096 aaKnown RBP18■□□□□ 0.47
TRAPPC4-205ENST00000525079 KRT27Q7Z3Y8 459 aa17.99■□□□□ 0.47
TRAPPC4-205ENST00000525079 KCNH5Q8NCM2 988 aa17.98■□□□□ 0.47
TRAPPC4-205ENST00000525079 EDC4Q6P2E9 1401 aaKnown RBP17.98■□□□□ 0.47
TRAPPC4-205ENST00000525079 AATKQ6ZMQ8 1374 aa17.96■□□□□ 0.47
TRAPPC4-205ENST00000525079 FAM182BQ5T319 152 aa17.96■□□□□ 0.47
TRAPPC4-205ENST00000525079 ARHGEF25Q86VW2 580 aa17.96■□□□□ 0.47
TRAPPC4-205ENST00000525079 AXIN2Q9Y2T1 843 aa17.96■□□□□ 0.47
TRAPPC4-205ENST00000525079 COL5A2P05997 1499 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC4-205ENST00000525079 USP31Q70CQ4 1352 aa17.95■□□□□ 0.46
TRAPPC4-205ENST00000525079 NINLQ9Y2I6 1382 aa17.95■□□□□ 0.46
TRAPPC4-205ENST00000525079 COL18A1P39060 1754 aa17.95■□□□□ 0.46
TRAPPC4-205ENST00000525079 NFAT5O94916 1531 aa17.94■□□□□ 0.46
TRAPPC4-205ENST00000525079 RGPD5Q99666 1765 aa17.94■□□□□ 0.46
TRAPPC4-205ENST00000525079 THSD7AQ9UPZ6 1657 aa17.93■□□□□ 0.46
TRAPPC4-205ENST00000525079 CDCA8Q53HL2 280 aa17.93■□□□□ 0.46
TRAPPC4-205ENST00000525079 TCP11L2Q8N4U5 519 aa17.93■□□□□ 0.46
TRAPPC4-205ENST00000525079 HSPA5P11021 654 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms