RNA–Protein interactions for RNA: ENST00000524203.1

PCM1-221, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-221ENST00000524203 SHANK3Q9BYB0 1731 aa9.96□□□□□ -0.82
PCM1-221ENST00000524203 RGPD8O14715 1765 aaPredicted RBP9.96□□□□□ -0.82
PCM1-221ENST00000524203 USP35Q9P2H5 1018 aa9.95□□□□□ -0.82
PCM1-221ENST00000524203 PHF8Q9UPP1 1060 aa9.95□□□□□ -0.82
PCM1-221ENST00000524203 DLC1Q96QB1 1528 aa9.94□□□□□ -0.82
PCM1-221ENST00000524203 RRBP1Q9P2E9 1410 aaKnown RBP9.94□□□□□ -0.82
PCM1-221ENST00000524203 PDE3BQ13370 1112 aa9.94□□□□□ -0.82
PCM1-221ENST00000524203 FAM50AQ14320 339 aaKnown RBP9.94□□□□□ -0.82
PCM1-221ENST00000524203 GPR162Q16538 588 aa9.94□□□□□ -0.82
PCM1-221ENST00000524203 STRN4Q9NRL3 753 aa9.94□□□□□ -0.82
PCM1-221ENST00000524203 TECPR2O15040 1411 aa9.93□□□□□ -0.82
PCM1-221ENST00000524203 VGFO15240 615 aaPredicted RBP9.93□□□□□ -0.82
PCM1-221ENST00000524203 HSPA6P17066 643 aa9.92□□□□□ -0.82
PCM1-221ENST00000524203 BCL11BQ9C0K0 894 aaPredicted RBP9.92□□□□□ -0.82
PCM1-221ENST00000524203 NRXN1Q9ULB1 1477 aa9.91□□□□□ -0.82
PCM1-221ENST00000524203 CHRNA2Q15822 529 aa9.91□□□□□ -0.82
PCM1-221ENST00000524203 PTF1AQ7RTS3 328 aa9.91□□□□□ -0.82
PCM1-221ENST00000524203 PELP1Q8IZL8 1130 aaKnown RBP9.91□□□□□ -0.82
PCM1-221ENST00000524203 PMFBP1Q8TBY8 1022 aa9.91□□□□□ -0.82
PCM1-221ENST00000524203 SGIP1Q9BQI5 828 aa9.91□□□□□ -0.82
PCM1-221ENST00000524203 PRDM11Q9NQV5 511 aa9.91□□□□□ -0.82
PCM1-221ENST00000524203 KIF1BO60333 1816 aa9.91□□□□□ -0.82
PCM1-221ENST00000524203 IFT172Q9UG01 1749 aa9.9□□□□□ -0.83
PCM1-221ENST00000524203 GOLGB1Q14789 3259 aaKnown RBP9.9□□□□□ -0.83
PCM1-221ENST00000524203 PROM2Q8N271 834 aa9.89□□□□□ -0.83
PCM1-221ENST00000524203 ARXQ96QS3 562 aa9.89□□□□□ -0.83
PCM1-221ENST00000524203 TRPM3Q9HCF6 1732 aaPredicted RBP9.89□□□□□ -0.83
PCM1-221ENST00000524203 CRYBG1Q9Y4K1 1723 aa9.88□□□□□ -0.83
PCM1-221ENST00000524203 ALS2Q96Q42 1657 aa9.88□□□□□ -0.83
PCM1-221ENST00000524203 PLSCR1O15162 318 aa9.88□□□□□ -0.83
PCM1-221ENST00000524203 TMEM132EQ6IEE7 984 aa9.88□□□□□ -0.83
PCM1-221ENST00000524203 BARGINQ6ZT62 677 aa9.88□□□□□ -0.83
PCM1-221ENST00000524203 MTFR1LQ9H019 292 aa9.88□□□□□ -0.83
PCM1-221ENST00000524203 RGPD3A6NKT7 1758 aaPredicted RBP9.88□□□□□ -0.83
PCM1-221ENST00000524203 RGPD4Q7Z3J3 1758 aa9.88□□□□□ -0.83
PCM1-221ENST00000524203 KIAA0232Q92628 1395 aa9.88□□□□□ -0.83
PCM1-221ENST00000524203 COL13A1Q5TAT6 717 aaPredicted RBP9.87□□□□□ -0.83
PCM1-221ENST00000524203 PPLO60437 1756 aa9.86□□□□□ -0.83
PCM1-221ENST00000524203 LARP1Q6PKG0 1096 aaKnown RBP9.86□□□□□ -0.83
PCM1-221ENST00000524203 KLHL34Q8N239 644 aa9.86□□□□□ -0.83
PCM1-221ENST00000524203 STK32BQ9NY57 414 aa9.86□□□□□ -0.83
PCM1-221ENST00000524203 ATP10DQ9P241 1426 aa9.86□□□□□ -0.83
PCM1-221ENST00000524203 ADGRF5Q8IZF2 1346 aa9.85□□□□□ -0.83
PCM1-221ENST00000524203 SSH2Q76I76 1423 aa9.85□□□□□ -0.83
PCM1-221ENST00000524203 SLC34A2O95436 690 aa9.85□□□□□ -0.83
PCM1-221ENST00000524203 EVA1CP58658 441 aa9.85□□□□□ -0.83
PCM1-221ENST00000524203 ZC3H6P61129 1189 aaKnown RBP9.85□□□□□ -0.83
PCM1-221ENST00000524203 SLC15A2Q16348 729 aa9.85□□□□□ -0.83
PCM1-221ENST00000524203 ABCC11Q96J66 1382 aa9.85□□□□□ -0.83
PCM1-221ENST00000524203 MAP3K5Q99683 1374 aa9.85□□□□□ -0.83
PCM1-221ENST00000524203 KNDC1Q76NI1 1749 aa9.85□□□□□ -0.83
PCM1-221ENST00000524203 PEAK1Q9H792 1746 aa9.85□□□□□ -0.83
PCM1-221ENST00000524203 SBF2Q86WG5 1849 aa9.84□□□□□ -0.83
PCM1-221ENST00000524203 SAFB2Q14151 953 aaKnown RBP eCLIP9.84□□□□□ -0.83
PCM1-221ENST00000524203 TCP11L2Q8N4U5 519 aa9.84□□□□□ -0.83
PCM1-221ENST00000524203 ZNF526Q8TF50 670 aaPredicted RBP9.84□□□□□ -0.83
PCM1-221ENST00000524203 RPGRIP1LQ68CZ1 1315 aa9.83□□□□□ -0.84
PCM1-221ENST00000524203 OVOS2A0A0G2JMS6 1433 aa9.83□□□□□ -0.84
PCM1-221ENST00000524203 OVOS2A0A0J9YW53 1432 aa9.83□□□□□ -0.84
PCM1-221ENST00000524203 OVOS2Q6IE36 1432 aa9.83□□□□□ -0.84
PCM1-221ENST00000524203 PAK3O75914 559 aaPredicted RBP9.83□□□□□ -0.84
PCM1-221ENST00000524203 GPBP1L1Q9HC44 474 aaPredicted RBP9.83□□□□□ -0.84
PCM1-221ENST00000524203 ACIN1Q9UKV3 1341 aaKnown RBP9.82□□□□□ -0.84
PCM1-221ENST00000524203 YBX3P16989 372 aaKnown RBP eCLIP9.82□□□□□ -0.84
PCM1-221ENST00000524203 PRELPP51888 382 aa9.82□□□□□ -0.84
PCM1-221ENST00000524203 APLP2Q06481 763 aa9.82□□□□□ -0.84
PCM1-221ENST00000524203 TXNRD1Q16881 649 aa9.82□□□□□ -0.84
PCM1-221ENST00000524203 NLGN2Q8NFZ4 835 aa9.82□□□□□ -0.84
PCM1-221ENST00000524203 ROCK1Q13464 1354 aa9.82□□□□□ -0.84
PCM1-221ENST00000524203 GPRASP1Q5JY77 1395 aa9.82□□□□□ -0.84
PCM1-221ENST00000524203 PARP4Q9UKK3 1724 aaKnown RBP9.82□□□□□ -0.84
PCM1-221ENST00000524203 DNAJC5GQ8N7S2 189 aa9.81□□□□□ -0.84
PCM1-221ENST00000524203 PHRF1Q9P1Y6 1649 aaKnown RBP9.81□□□□□ -0.84
PCM1-221ENST00000524203 YTHDC2Q9H6S0 1430 aaKnown RBP9.81□□□□□ -0.84
PCM1-221ENST00000524203 NUTM2GQ5VZR2 741 aa9.8□□□□□ -0.84
PCM1-221ENST00000524203 TNS4Q8IZW8 715 aa9.8□□□□□ -0.84
PCM1-221ENST00000524203 ITGAEP38570 1179 aa9.79□□□□□ -0.84
PCM1-221ENST00000524203 ATP7BP35670 1465 aa9.79□□□□□ -0.84
PCM1-221ENST00000524203 LRRC37A3O60309 1634 aa9.78□□□□□ -0.84
PCM1-221ENST00000524203 C11orf95C9JLR9 678 aaPredicted RBP9.78□□□□□ -0.84
PCM1-221ENST00000524203 PRAM1Q96QH2 718 aa9.78□□□□□ -0.84
PCM1-221ENST00000524203 THRAP3Q9Y2W1 955 aaKnown RBP9.78□□□□□ -0.84
PCM1-221ENST00000524203 ANKARQ7Z5J8 1434 aa9.78□□□□□ -0.84
PCM1-221ENST00000524203 PRR36Q9H6K5 1346 aa9.78□□□□□ -0.84
PCM1-221ENST00000524203 APLP1P51693 650 aa9.77□□□□□ -0.85
PCM1-221ENST00000524203 MARCH10Q8NA82 808 aaPredicted RBP9.77□□□□□ -0.85
PCM1-221ENST00000524203 HIRIP3Q9BW71 556 aaPredicted RBP9.77□□□□□ -0.85
PCM1-221ENST00000524203 LMO7Q8WWI1 1683 aa9.77□□□□□ -0.85
PCM1-221ENST00000524203 LOC105371045A0A1W2PR82 267 aa9.76□□□□□ -0.85
PCM1-221ENST00000524203 GRIN3BO60391 1043 aa9.76□□□□□ -0.85
PCM1-221ENST00000524203 DDB1Q16531 1140 aa9.76□□□□□ -0.85
PCM1-221ENST00000524203 ZNF827Q17R98 1081 aa9.76□□□□□ -0.85
PCM1-221ENST00000524203 RGL3Q3MIN7 710 aa9.76□□□□□ -0.85
PCM1-221ENST00000524203 NGDNQ8NEJ9 315 aaKnown RBP9.76□□□□□ -0.85
PCM1-221ENST00000524203 SIRT1Q96EB6 747 aa9.76□□□□□ -0.85
PCM1-221ENST00000524203 ADCY9O60503 1353 aa9.75□□□□□ -0.85
PCM1-221ENST00000524203 DHX57Q6P158 1386 aaKnown RBP9.75□□□□□ -0.85
PCM1-221ENST00000524203 KIF3CO14782 793 aa9.75□□□□□ -0.85
PCM1-221ENST00000524203 TOPAZ1Q8N9V7 1692 aa9.74□□□□□ -0.85
PCM1-221ENST00000524203 HTRA3P83110 453 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms