RNA–Protein interactions for RNA: ENST00000523985.5

CCNC-217, Transcript of cyclin C, humanhuman

TSL 2 BASIC

Gene CCNC, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-217ENST00000523985 NINLQ9Y2I6 1382 aa20.26■□□□□ 0.83
CCNC-217ENST00000523985 EIF4G2P78344 907 aaKnown RBP eCLIP20.24■□□□□ 0.83
CCNC-217ENST00000523985 NLRP13Q86W25 1043 aa20.24■□□□□ 0.83
CCNC-217ENST00000523985 ABTB2Q8N961 1025 aa20.24■□□□□ 0.83
CCNC-217ENST00000523985 TERF2IPQ9NYB0 399 aa20.24■□□□□ 0.83
CCNC-217ENST00000523985 AFF2P51816 1311 aa20.24■□□□□ 0.83
CCNC-217ENST00000523985 TOPAZ1Q8N9V7 1692 aa20.23■□□□□ 0.83
CCNC-217ENST00000523985 HDGFL2Q7Z4V5 671 aaPredicted RBP20.23■□□□□ 0.83
CCNC-217ENST00000523985 POTEAQ6S8J7 498 aa20.22■□□□□ 0.83
CCNC-217ENST00000523985 ILDR2Q71H61 639 aa20.22■□□□□ 0.83
CCNC-217ENST00000523985 TTC21AQ8NDW8 1320 aa20.22■□□□□ 0.83
CCNC-217ENST00000523985 USP6P35125 1406 aa20.21■□□□□ 0.83
CCNC-217ENST00000523985 CPSF1Q10570 1443 aaKnown RBP20.21■□□□□ 0.83
CCNC-217ENST00000523985 TMC1Q8TDI8 760 aa20.21■□□□□ 0.83
CCNC-217ENST00000523985 CABLES1Q8TDN4 633 aa20.2■□□□□ 0.82
CCNC-217ENST00000523985 QTRT2Q9H974 415 aaKnown RBP20.2■□□□□ 0.82
CCNC-217ENST00000523985 USP21Q9UK80 565 aa20.2■□□□□ 0.82
CCNC-217ENST00000523985 RXRBP28702 533 aa20.19■□□□□ 0.82
CCNC-217ENST00000523985 TRPC5Q9UL62 973 aaPredicted RBP20.19■□□□□ 0.82
CCNC-217ENST00000523985 TRPM3Q9HCF6 1732 aaPredicted RBP20.19■□□□□ 0.82
CCNC-217ENST00000523985 SSH2Q76I76 1423 aa20.19■□□□□ 0.82
CCNC-217ENST00000523985 SLC12A5Q9H2X9 1139 aa20.18■□□□□ 0.82
CCNC-217ENST00000523985 KTN1Q86UP2 1357 aaKnown RBP20.18■□□□□ 0.82
CCNC-217ENST00000523985 TTC21BQ7Z4L5 1316 aa20.17■□□□□ 0.82
CCNC-217ENST00000523985 NLRP6P59044 892 aa20.16■□□□□ 0.82
CCNC-217ENST00000523985 RBM6P78332 1123 aaKnown RBP20.16■□□□□ 0.82
CCNC-217ENST00000523985 UNC5CLQ8IV45 518 aa20.16■□□□□ 0.82
CCNC-217ENST00000523985 ALS2Q96Q42 1657 aa20.16■□□□□ 0.82
CCNC-217ENST00000523985 USP19O94966 1318 aa20.15■□□□□ 0.82
CCNC-217ENST00000523985 FAM83GA6ND36 823 aa20.14■□□□□ 0.81
CCNC-217ENST00000523985 KCNH5Q8NCM2 988 aa20.14■□□□□ 0.81
CCNC-217ENST00000523985 GCP02774 474 aa20.13■□□□□ 0.81
CCNC-217ENST00000523985 HSPA5P11021 654 aaKnown RBP20.13■□□□□ 0.81
CCNC-217ENST00000523985 SLIT2O94813 1529 aa20.12■□□□□ 0.81
CCNC-217ENST00000523985 SOCS7O14512 581 aa20.12■□□□□ 0.81
CCNC-217ENST00000523985 NUTM2GQ5VZR2 741 aa20.12■□□□□ 0.81
CCNC-217ENST00000523985 PRDM11Q9NQV5 511 aa20.12■□□□□ 0.81
CCNC-217ENST00000523985 BCL9LQ86UU0 1499 aa20.11■□□□□ 0.81
CCNC-217ENST00000523985 EDC4Q6P2E9 1401 aaKnown RBP20.1■□□□□ 0.81
CCNC-217ENST00000523985 CPDO75976 1380 aa20.1■□□□□ 0.81
CCNC-217ENST00000523985 CD163L1Q9NR16 1453 aa20.1■□□□□ 0.81
CCNC-217ENST00000523985 CDK12Q9NYV4 1490 aaPredicted RBP20.1■□□□□ 0.81
CCNC-217ENST00000523985 USP31Q70CQ4 1352 aa20.09■□□□□ 0.81
CCNC-217ENST00000523985 ANKRD36BQ8N2N9 1353 aa20.09■□□□□ 0.81
CCNC-217ENST00000523985 PLEKHG5O94827 1062 aa20.09■□□□□ 0.81
CCNC-217ENST00000523985 VPS72Q15906 364 aa20.09■□□□□ 0.81
CCNC-217ENST00000523985 ATRNO75882 1429 aa20.09■□□□□ 0.81
CCNC-217ENST00000523985 A0A1W2PP64 1363 aa20.08■□□□□ 0.81
CCNC-217ENST00000523985 GJD4Q96KN9 370 aaPredicted RBP20.08■□□□□ 0.81
CCNC-217ENST00000523985 ZC3H6P61129 1189 aaKnown RBP20.07■□□□□ 0.8
CCNC-217ENST00000523985 BTG4Q9NY30 223 aa20.07■□□□□ 0.8
CCNC-217ENST00000523985 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.06■□□□□ 0.8
CCNC-217ENST00000523985 KIAA0232Q92628 1395 aa20.06■□□□□ 0.8
CCNC-217ENST00000523985 MARF1Q9Y4F3 1742 aaKnown RBP20.05■□□□□ 0.8
CCNC-217ENST00000523985 AKAP12Q02952 1782 aa20.03■□□□□ 0.8
CCNC-217ENST00000523985 ONECUT3O60422 494 aaPredicted RBP20.02■□□□□ 0.8
CCNC-217ENST00000523985 AATKQ6ZMQ8 1374 aa20.02■□□□□ 0.8
CCNC-217ENST00000523985 SLIT3O75094 1523 aa20.02■□□□□ 0.79
CCNC-217ENST00000523985 COL14A1Q05707 1796 aaKnown RBP20.01■□□□□ 0.79
CCNC-217ENST00000523985 EVA1CP58658 441 aa20.01■□□□□ 0.79
CCNC-217ENST00000523985 ARHGEF25Q86VW2 580 aa20.01■□□□□ 0.79
CCNC-217ENST00000523985 NME9Q86XW9 330 aa20.01■□□□□ 0.79
CCNC-217ENST00000523985 ABCA3Q99758 1704 aa20■□□□□ 0.79
CCNC-217ENST00000523985 COG3Q96JB2 828 aa20■□□□□ 0.79
CCNC-217ENST00000523985 NWD2Q9ULI1 1742 aa19.99■□□□□ 0.79
CCNC-217ENST00000523985 CRYBG1Q9Y4K1 1723 aa19.99■□□□□ 0.79
CCNC-217ENST00000523985 CHRNA2Q15822 529 aa19.99■□□□□ 0.79
CCNC-217ENST00000523985 MON2Q7Z3U7 1717 aa19.99■□□□□ 0.79
CCNC-217ENST00000523985 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.99■□□□□ 0.79
CCNC-217ENST00000523985 CCDC9Q9Y3X0 531 aaKnown RBP19.98■□□□□ 0.79
CCNC-217ENST00000523985 NRKQ7Z2Y5 1582 aa19.97■□□□□ 0.79
CCNC-217ENST00000523985 FYB1O15117 783 aa19.97■□□□□ 0.79
CCNC-217ENST00000523985 PHRF1Q9P1Y6 1649 aaKnown RBP19.97■□□□□ 0.79
CCNC-217ENST00000523985 SPATA31A5Q5VU36 1347 aa19.97■□□□□ 0.79
CCNC-217ENST00000523985 SPATA31A7Q8IWB4 1347 aa19.97■□□□□ 0.79
CCNC-217ENST00000523985 PIK3C2AO00443 1686 aa19.96■□□□□ 0.79
CCNC-217ENST00000523985 THRAP3Q9Y2W1 955 aaKnown RBP19.95■□□□□ 0.78
CCNC-217ENST00000523985 POLR3GLQ9BT43 218 aa19.94■□□□□ 0.78
CCNC-217ENST00000523985 CARD14Q9BXL6 1004 aa19.94■□□□□ 0.78
CCNC-217ENST00000523985 ZRANB1Q9UGI0 708 aa19.94■□□□□ 0.78
CCNC-217ENST00000523985 CGNL1Q0VF96 1302 aa19.94■□□□□ 0.78
CCNC-217ENST00000523985 OVOS2A0A0J9YW53 1432 aa19.93■□□□□ 0.78
CCNC-217ENST00000523985 OVOS2Q6IE36 1432 aa19.93■□□□□ 0.78
CCNC-217ENST00000523985 STRN4Q9NRL3 753 aa19.93■□□□□ 0.78
CCNC-217ENST00000523985 SPATA31A1Q5TZJ5 1347 aa19.93■□□□□ 0.78
CCNC-217ENST00000523985 C11orf95C9JLR9 678 aaPredicted RBP19.92■□□□□ 0.78
CCNC-217ENST00000523985 BARGINQ6ZT62 677 aa19.92■□□□□ 0.78
CCNC-217ENST00000523985 RGS12O14924 1447 aa19.92■□□□□ 0.78
CCNC-217ENST00000523985 PLCH1Q4KWH8 1693 aa19.91■□□□□ 0.78
CCNC-217ENST00000523985 SEPT12Q8IYM1 358 aa19.91■□□□□ 0.78
CCNC-217ENST00000523985 ABCC6O95255 1503 aa19.91■□□□□ 0.78
CCNC-217ENST00000523985 USP54Q70EL1 1684 aa19.91■□□□□ 0.78
CCNC-217ENST00000523985 CAMTA1Q9Y6Y1 1673 aa19.91■□□□□ 0.78
CCNC-217ENST00000523985 ZBTB7CA1YPR0 619 aa19.9■□□□□ 0.78
CCNC-217ENST00000523985 SOX12O15370 315 aa19.9■□□□□ 0.78
CCNC-217ENST00000523985 PANK3Q9H999 370 aa19.9■□□□□ 0.78
CCNC-217ENST00000523985 ZEB1P37275 1124 aaPredicted RBP19.89■□□□□ 0.77
CCNC-217ENST00000523985 KIF7Q2M1P5 1343 aa19.89■□□□□ 0.77
CCNC-217ENST00000523985 LARP1Q6PKG0 1096 aaKnown RBP19.89■□□□□ 0.77
CCNC-217ENST00000523985 TCP11L2Q8N4U5 519 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms