RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 HAP1P54257 671 aaPredicted RBP17.81■□□□□ 0.44
VEGFA-223ENST00000523125 CCDC61Q9Y6R9 512 aa17.81■□□□□ 0.44
VEGFA-223ENST00000523125 BRWD3Q6RI45 1802 aa17.81■□□□□ 0.44
VEGFA-223ENST00000523125 ACEP12821 1306 aa17.8■□□□□ 0.44
VEGFA-223ENST00000523125 PLEKHG3A1L390 1219 aa17.8■□□□□ 0.44
VEGFA-223ENST00000523125 FAM83GA6ND36 823 aa17.8■□□□□ 0.44
VEGFA-223ENST00000523125 TRIM26Q12899 539 aaPredicted RBP17.8■□□□□ 0.44
VEGFA-223ENST00000523125 COL14A1Q05707 1796 aaKnown RBP17.79■□□□□ 0.44
VEGFA-223ENST00000523125 NBPF8Q3BBV2 869 aa17.79■□□□□ 0.44
VEGFA-223ENST00000523125 RALGAPBQ86X10 1494 aa17.79■□□□□ 0.44
VEGFA-223ENST00000523125 PHRF1Q9P1Y6 1649 aaKnown RBP17.79■□□□□ 0.44
VEGFA-223ENST00000523125 PAK3O75914 559 aaPredicted RBP17.78■□□□□ 0.44
VEGFA-223ENST00000523125 ROCK2O75116 1388 aaKnown RBP17.77■□□□□ 0.43
VEGFA-223ENST00000523125 SRPK2P78362 688 aaKnown RBP17.76■□□□□ 0.43
VEGFA-223ENST00000523125 CABP2Q9NPB3 220 aa17.76■□□□□ 0.43
VEGFA-223ENST00000523125 PPIP5K1Q6PFW1 1433 aa17.75■□□□□ 0.43
VEGFA-223ENST00000523125 VPS72Q15906 364 aa17.75■□□□□ 0.43
VEGFA-223ENST00000523125 ATAD2Q6PL18 1390 aa17.74■□□□□ 0.43
VEGFA-223ENST00000523125 BTG4Q9NY30 223 aa17.72■□□□□ 0.43
VEGFA-223ENST00000523125 ONECUT3O60422 494 aaPredicted RBP17.71■□□□□ 0.43
VEGFA-223ENST00000523125 NUTM2GQ5VZR2 741 aa17.71■□□□□ 0.43
VEGFA-223ENST00000523125 AKAP12Q02952 1782 aa17.71■□□□□ 0.43
VEGFA-223ENST00000523125 NRKQ7Z2Y5 1582 aa17.7■□□□□ 0.42
VEGFA-223ENST00000523125 CABP1Q9NZU7 370 aa17.7■□□□□ 0.42
VEGFA-223ENST00000523125 EVC2Q86UK5 1308 aa17.7■□□□□ 0.42
VEGFA-223ENST00000523125 KIAA0232Q92628 1395 aa17.69■□□□□ 0.42
VEGFA-223ENST00000523125 TONSLQ96HA7 1378 aa17.68■□□□□ 0.42
VEGFA-223ENST00000523125 USP6P35125 1406 aa17.68■□□□□ 0.42
VEGFA-223ENST00000523125 ABTB2Q8N961 1025 aa17.68■□□□□ 0.42
VEGFA-223ENST00000523125 PRDM11Q9NQV5 511 aa17.68■□□□□ 0.42
VEGFA-223ENST00000523125 CCDC9Q9Y3X0 531 aaKnown RBP17.68■□□□□ 0.42
VEGFA-223ENST00000523125 SEPT12Q8IYM1 358 aa17.67■□□□□ 0.42
VEGFA-223ENST00000523125 PIK3C2AO00443 1686 aa17.67■□□□□ 0.42
VEGFA-223ENST00000523125 USP19O94966 1318 aa17.67■□□□□ 0.42
VEGFA-223ENST00000523125 BRD4O60885 1362 aaPredicted RBP17.66■□□□□ 0.42
VEGFA-223ENST00000523125 SSH2Q76I76 1423 aa17.66■□□□□ 0.42
VEGFA-223ENST00000523125 CHRNA2Q15822 529 aa17.66■□□□□ 0.42
VEGFA-223ENST00000523125 LMO7Q8WWI1 1683 aa17.66■□□□□ 0.42
VEGFA-223ENST00000523125 SBNO2Q9Y2G9 1366 aa17.66■□□□□ 0.42
VEGFA-223ENST00000523125 ZC3H6P61129 1189 aaKnown RBP17.65■□□□□ 0.42
VEGFA-223ENST00000523125 CARD11Q9BXL7 1154 aa17.65■□□□□ 0.42
VEGFA-223ENST00000523125 SPATA31A5Q5VU36 1347 aa17.65■□□□□ 0.42
VEGFA-223ENST00000523125 SPATA31A7Q8IWB4 1347 aa17.65■□□□□ 0.42
VEGFA-223ENST00000523125 THSD7AQ9UPZ6 1657 aa17.64■□□□□ 0.41
VEGFA-223ENST00000523125 NLRP13Q86W25 1043 aa17.63■□□□□ 0.41
VEGFA-223ENST00000523125 CAMTA1Q9Y6Y1 1673 aa17.63■□□□□ 0.41
VEGFA-223ENST00000523125 MON2Q7Z3U7 1717 aa17.63■□□□□ 0.41
VEGFA-223ENST00000523125 CPDO75976 1380 aa17.63■□□□□ 0.41
VEGFA-223ENST00000523125 FAM98CQ17RN3 349 aaKnown RBP17.62■□□□□ 0.41
VEGFA-223ENST00000523125 CPSF1Q10570 1443 aaKnown RBP17.62■□□□□ 0.41
VEGFA-223ENST00000523125 SLIT3O75094 1523 aa17.62■□□□□ 0.41
VEGFA-223ENST00000523125 GCP02774 474 aa17.61■□□□□ 0.41
VEGFA-223ENST00000523125 CCDC125Q86Z20 511 aa17.61■□□□□ 0.41
VEGFA-223ENST00000523125 ZNF692Q9BU19 519 aaPredicted RBP17.6■□□□□ 0.41
VEGFA-223ENST00000523125 SPATA31A1Q5TZJ5 1347 aa17.6■□□□□ 0.41
VEGFA-223ENST00000523125 COL18A1P39060 1754 aa17.6■□□□□ 0.41
VEGFA-223ENST00000523125 NLRP6P59044 892 aa17.59■□□□□ 0.41
VEGFA-223ENST00000523125 KRT27Q7Z3Y8 459 aa17.59■□□□□ 0.41
VEGFA-223ENST00000523125 RGPD5Q99666 1765 aa17.58■□□□□ 0.41
VEGFA-223ENST00000523125 BLMP54132 1417 aaPredicted RBP17.58■□□□□ 0.41
VEGFA-223ENST00000523125 TTC21BQ7Z4L5 1316 aa17.58■□□□□ 0.4
VEGFA-223ENST00000523125 STRN4Q9NRL3 753 aa17.58■□□□□ 0.4
VEGFA-223ENST00000523125 CD163L1Q9NR16 1453 aa17.57■□□□□ 0.4
VEGFA-223ENST00000523125 A0A0G2JS52 829 aa17.56■□□□□ 0.4
VEGFA-223ENST00000523125 MYT1Q01538 1121 aa17.56■□□□□ 0.4
VEGFA-223ENST00000523125 KTN1Q86UP2 1357 aaKnown RBP17.55■□□□□ 0.4
VEGFA-223ENST00000523125 USP54Q70EL1 1684 aa17.55■□□□□ 0.4
VEGFA-223ENST00000523125 TESK2Q96S53 571 aa17.55■□□□□ 0.4
VEGFA-223ENST00000523125 COL5A2P05997 1499 aaPredicted RBP17.55■□□□□ 0.4
VEGFA-223ENST00000523125 TTC21AQ8NDW8 1320 aa17.54■□□□□ 0.4
VEGFA-223ENST00000523125 EVA1CP58658 441 aa17.54■□□□□ 0.4
VEGFA-223ENST00000523125 LARP1Q6PKG0 1096 aaKnown RBP17.54■□□□□ 0.4
VEGFA-223ENST00000523125 AATKQ6ZMQ8 1374 aa17.53■□□□□ 0.4
VEGFA-223ENST00000523125 FAM182BQ5T319 152 aa17.53■□□□□ 0.4
VEGFA-223ENST00000523125 RGPD1P0DJD0 1748 aa17.52■□□□□ 0.4
VEGFA-223ENST00000523125 ST20-MTHFSA0A0A6YYL1 179 aa17.52■□□□□ 0.4
VEGFA-223ENST00000523125 PUS7Q96PZ0 661 aaKnown RBP17.52■□□□□ 0.4
VEGFA-223ENST00000523125 SLC12A5Q9H2X9 1139 aa17.52■□□□□ 0.4
VEGFA-223ENST00000523125 USP35Q9P2H5 1018 aa17.52■□□□□ 0.4
VEGFA-223ENST00000523125 NFAT5O94916 1531 aa17.52■□□□□ 0.39
VEGFA-223ENST00000523125 BARGINQ6ZT62 677 aa17.51■□□□□ 0.39
VEGFA-223ENST00000523125 DEFB132Q7Z7B7 95 aa17.51■□□□□ 0.39
VEGFA-223ENST00000523125 TNS1Q9HBL0 1735 aaKnown RBP17.51■□□□□ 0.39
VEGFA-223ENST00000523125 PARP4Q9UKK3 1724 aaKnown RBP17.51■□□□□ 0.39
VEGFA-223ENST00000523125 SRCAPQ6ZRS2 3230 aa17.5■□□□□ 0.39
VEGFA-223ENST00000523125 ARHGEF25Q86VW2 580 aa17.5■□□□□ 0.39
VEGFA-223ENST00000523125 ZRANB1Q9UGI0 708 aa17.5■□□□□ 0.39
VEGFA-223ENST00000523125 AXIN2Q9Y2T1 843 aa17.5■□□□□ 0.39
VEGFA-223ENST00000523125 WNK3Q9BYP7 1800 aa17.49■□□□□ 0.39
VEGFA-223ENST00000523125 LTN1O94822 1766 aa17.49■□□□□ 0.39
VEGFA-223ENST00000523125 ZBTB7CA1YPR0 619 aa17.49■□□□□ 0.39
VEGFA-223ENST00000523125 TCP11L2Q8N4U5 519 aa17.49■□□□□ 0.39
VEGFA-223ENST00000523125 TMC1Q8TDI8 760 aa17.49■□□□□ 0.39
VEGFA-223ENST00000523125 CRB1P82279 1406 aa17.48■□□□□ 0.39
VEGFA-223ENST00000523125 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.48■□□□□ 0.39
VEGFA-223ENST00000523125 KCNH5Q8NCM2 988 aa17.48■□□□□ 0.39
VEGFA-223ENST00000523125 USP31Q70CQ4 1352 aa17.48■□□□□ 0.39
VEGFA-223ENST00000523125 SF3B2Q13435 895 aaKnown RBP17.47■□□□□ 0.39
VEGFA-223ENST00000523125 PCGF6Q9BYE7 350 aa17.47■□□□□ 0.39
VEGFA-223ENST00000523125 THRAP3Q9Y2W1 955 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms