RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 MMP16P51512 607 aa4.9□□□□□ -1.63
CKS1BP7-201ENST00000522230 CCDC24Q8N4L8 307 aa4.9□□□□□ -1.63
CKS1BP7-201ENST00000522230 NUDT12Q9BQG2 462 aa4.9□□□□□ -1.63
CKS1BP7-201ENST00000522230 FKBPLQ9UIM3 349 aa4.9□□□□□ -1.63
CKS1BP7-201ENST00000522230 SERPINA10Q9UK55 444 aa4.9□□□□□ -1.63
CKS1BP7-201ENST00000522230 PPEF1O14829 653 aaPredicted RBP4.89□□□□□ -1.63
CKS1BP7-201ENST00000522230 WASHC4Q2M389 1173 aa4.89□□□□□ -1.63
CKS1BP7-201ENST00000522230 UCN2Q96RP3 112 aa4.89□□□□□ -1.63
CKS1BP7-201ENST00000522230 SLC6A16Q9GZN6 736 aa4.89□□□□□ -1.63
CKS1BP7-201ENST00000522230 ALG2Q9H553 416 aa4.89□□□□□ -1.63
CKS1BP7-201ENST00000522230 IL21Q9HBE4 155 aa4.89□□□□□ -1.63
CKS1BP7-201ENST00000522230 PIK3CDO00329 1044 aa4.88□□□□□ -1.63
CKS1BP7-201ENST00000522230 KCNH2Q12809 1159 aa4.88□□□□□ -1.63
CKS1BP7-201ENST00000522230 OCSTAMPQ9BR26 566 aa4.88□□□□□ -1.63
CKS1BP7-201ENST00000522230 EVA1BQ9NVM1 165 aa4.88□□□□□ -1.63
CKS1BP7-201ENST00000522230 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.87□□□□□ -1.63
CKS1BP7-201ENST00000522230 ZBBXA8MT70 800 aa4.87□□□□□ -1.63
CKS1BP7-201ENST00000522230 NR1H3Q13133 447 aa4.87□□□□□ -1.63
CKS1BP7-201ENST00000522230 LINC01559Q495D7 138 aa4.87□□□□□ -1.63
CKS1BP7-201ENST00000522230 CDCA8Q53HL2 280 aa4.87□□□□□ -1.63
CKS1BP7-201ENST00000522230 CFAP70Q5T0N1 1121 aa4.87□□□□□ -1.63
CKS1BP7-201ENST00000522230 NYAP1Q6ZVC0 841 aa4.87□□□□□ -1.63
CKS1BP7-201ENST00000522230 UNC93B1Q9H1C4 597 aa4.87□□□□□ -1.63
CKS1BP7-201ENST00000522230 FCF1Q9Y324 198 aaKnown RBP4.87□□□□□ -1.63
CKS1BP7-201ENST00000522230 SEMA3FQ13275 785 aa4.86□□□□□ -1.63
CKS1BP7-201ENST00000522230 TBC1D9Q6ZT07 1266 aa4.86□□□□□ -1.63
CKS1BP7-201ENST00000522230 RNF166Q96A37 237 aaPredicted RBP4.86□□□□□ -1.63
CKS1BP7-201ENST00000522230 CARNS1A5YM72 827 aa4.85□□□□□ -1.63
CKS1BP7-201ENST00000522230 PALM3A6NDB9 673 aaPredicted RBP4.85□□□□□ -1.63
CKS1BP7-201ENST00000522230 SPNS2Q8IVW8 549 aa4.85□□□□□ -1.63
CKS1BP7-201ENST00000522230 RETREG2Q8NC44 543 aa4.85□□□□□ -1.63
CKS1BP7-201ENST00000522230 BAP1Q92560 729 aa4.85□□□□□ -1.63
CKS1BP7-201ENST00000522230 FOXJ1Q92949 421 aa4.85□□□□□ -1.63
CKS1BP7-201ENST00000522230 CARD14Q9BXL6 1004 aa4.85□□□□□ -1.63
CKS1BP7-201ENST00000522230 PPP1R12CQ9BZL4 782 aa4.85□□□□□ -1.63
CKS1BP7-201ENST00000522230 TFIP11Q9UBB9 837 aaKnown RBP4.85□□□□□ -1.63
CKS1BP7-201ENST00000522230 MAGEB6P1A0A0J9YX57 407 aa4.84□□□□□ -1.63
CKS1BP7-201ENST00000522230 LMOD1P29536 600 aaPredicted RBP4.84□□□□□ -1.63
CKS1BP7-201ENST00000522230 EIF4G2P78344 907 aaKnown RBP eCLIP4.84□□□□□ -1.63
CKS1BP7-201ENST00000522230 PLA2G2CQ5R387 149 aa4.84□□□□□ -1.63
CKS1BP7-201ENST00000522230 PNMA1Q8ND90 353 aa4.84□□□□□ -1.63
CKS1BP7-201ENST00000522230 FAM174AQ8TBP5 190 aa4.84□□□□□ -1.63
CKS1BP7-201ENST00000522230 ADAM32Q8TC27 787 aa4.84□□□□□ -1.63
CKS1BP7-201ENST00000522230 PCDHB9Q9Y5E1 797 aa4.84□□□□□ -1.63
CKS1BP7-201ENST00000522230 TRIM26Q12899 539 aaPredicted RBP4.83□□□□□ -1.64
CKS1BP7-201ENST00000522230 C4orf48Q5BLP8 95 aa4.83□□□□□ -1.64
CKS1BP7-201ENST00000522230 PDXDC2PQ6P474 469 aa4.83□□□□□ -1.64
CKS1BP7-201ENST00000522230 SH3BP5LQ7L8J4 393 aa4.83□□□□□ -1.64
CKS1BP7-201ENST00000522230 DEPDC4Q8N2C3 294 aa4.83□□□□□ -1.64
CKS1BP7-201ENST00000522230 ARHGAP9Q9BRR9 750 aa4.83□□□□□ -1.64
CKS1BP7-201ENST00000522230 SHROOM4Q9ULL8 1493 aa4.82□□□□□ -1.64
CKS1BP7-201ENST00000522230 ZC3H4Q9UPT8 1303 aaKnown RBP4.82□□□□□ -1.64
CKS1BP7-201ENST00000522230 RNF223E7ERA6 249 aa4.82□□□□□ -1.64
CKS1BP7-201ENST00000522230 SKIP12755 728 aa4.82□□□□□ -1.64
CKS1BP7-201ENST00000522230 SRPK2P78362 688 aaKnown RBP4.82□□□□□ -1.64
CKS1BP7-201ENST00000522230 KCNC4Q03721 635 aa4.82□□□□□ -1.64
CKS1BP7-201ENST00000522230 PTK2Q05397 1052 aa4.82□□□□□ -1.64
CKS1BP7-201ENST00000522230 TSGA10IPQ3SY00 556 aa4.82□□□□□ -1.64
CKS1BP7-201ENST00000522230 NBPF14Q5TI25 921 aa4.82□□□□□ -1.64
CKS1BP7-201ENST00000522230 ARMC2Q8NEN0 867 aa4.82□□□□□ -1.64
CKS1BP7-201ENST00000522230 HCSTQ9UBK5 93 aa4.82□□□□□ -1.64
CKS1BP7-201ENST00000522230 MAFBQ9Y5Q3 323 aaPredicted RBP4.82□□□□□ -1.64
CKS1BP7-201ENST00000522230 ATP9BO43861 1147 aa4.81□□□□□ -1.64
CKS1BP7-201ENST00000522230 SOX11P35716 441 aa4.81□□□□□ -1.64
CKS1BP7-201ENST00000522230 AGERQ15109 404 aa4.81□□□□□ -1.64
CKS1BP7-201ENST00000522230 ZBTB33Q86T24 672 aa4.81□□□□□ -1.64
CKS1BP7-201ENST00000522230 CCDC180Q9P1Z9 1646 aa4.8□□□□□ -1.64
CKS1BP7-201ENST00000522230 ITGBL1O95965 494 aaPredicted RBP4.8□□□□□ -1.64
CKS1BP7-201ENST00000522230 PDIA4P13667 645 aaKnown RBP4.8□□□□□ -1.64
CKS1BP7-201ENST00000522230 SH3BP2P78314 561 aa4.8□□□□□ -1.64
CKS1BP7-201ENST00000522230 SKOR1P84550 965 aa4.8□□□□□ -1.64
CKS1BP7-201ENST00000522230 ERFEQ4G0M1 354 aa4.8□□□□□ -1.64
CKS1BP7-201ENST00000522230 PPP1R18Q6NYC8 613 aa4.8□□□□□ -1.64
CKS1BP7-201ENST00000522230 ZNF511Q8NB15 262 aa4.8□□□□□ -1.64
CKS1BP7-201ENST00000522230 PBXIP1Q96AQ6 731 aa4.8□□□□□ -1.64
CKS1BP7-201ENST00000522230 CEP126Q9P2H0 1117 aa4.8□□□□□ -1.64
CKS1BP7-201ENST00000522230 USP17L3A6NCW0 530 aa4.79□□□□□ -1.64
CKS1BP7-201ENST00000522230 USP17L4A6NCW7 530 aa4.79□□□□□ -1.64
CKS1BP7-201ENST00000522230 USP17L5A8MUK1 530 aa4.79□□□□□ -1.64
CKS1BP7-201ENST00000522230 GIGYF1O75420 1035 aaPredicted RBP4.79□□□□□ -1.64
CKS1BP7-201ENST00000522230 RAB15P59190 212 aa4.79□□□□□ -1.64
CKS1BP7-201ENST00000522230 USP17L2Q6R6M4 530 aa4.79□□□□□ -1.64
CKS1BP7-201ENST00000522230 USP17L1Q7RTZ2 530 aa4.79□□□□□ -1.64
CKS1BP7-201ENST00000522230 SH3RF1Q7Z6J0 888 aa4.79□□□□□ -1.64
CKS1BP7-201ENST00000522230 DZIP3Q86Y13 1208 aaKnown RBP4.79□□□□□ -1.64
CKS1BP7-201ENST00000522230 RNF135Q8IUD6 432 aa4.79□□□□□ -1.64
CKS1BP7-201ENST00000522230 GPKOWQ92917 476 aaPredicted RBP eCLIP4.79□□□□□ -1.64
CKS1BP7-201ENST00000522230 GPSM3Q9Y4H4 160 aa4.79□□□□□ -1.64
CKS1BP7-201ENST00000522230 TRIM32Q13049 653 aa4.78□□□□□ -1.64
CKS1BP7-201ENST00000522230 MMRN1Q13201 1228 aa4.78□□□□□ -1.64
CKS1BP7-201ENST00000522230 SLFNL1Q499Z3 407 aa4.78□□□□□ -1.64
CKS1BP7-201ENST00000522230 PHTF2Q8N3S3 785 aa4.78□□□□□ -1.64
CKS1BP7-201ENST00000522230 EMID1Q96A84 441 aaPredicted RBP4.78□□□□□ -1.64
CKS1BP7-201ENST00000522230 CCDC85AQ96PX6 553 aaPredicted RBP4.78□□□□□ -1.64
CKS1BP7-201ENST00000522230 PPP1R15AO75807 674 aaPredicted RBP4.77□□□□□ -1.65
CKS1BP7-201ENST00000522230 NCOA4Q13772 614 aa4.77□□□□□ -1.65
CKS1BP7-201ENST00000522230 KANK4Q5T7N3 995 aaPredicted RBP4.77□□□□□ -1.65
CKS1BP7-201ENST00000522230 LIAT1Q6ZQX7 453 aa4.77□□□□□ -1.65
CKS1BP7-201ENST00000522230 BPHLQ86WA6 291 aaPredicted RBP4.77□□□□□ -1.65
CKS1BP7-201ENST00000522230 AEBP1Q8IUX7 1158 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms