RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 ADGRF5Q8IZF2 1346 aa11.95□□□□□ -0.5
CTNNA1-230ENST00000521724 CLTCL1P53675 1640 aa11.95□□□□□ -0.5
CTNNA1-230ENST00000521724 ZCCHC11Q5TAX3 1644 aaKnown RBP11.95□□□□□ -0.5
CTNNA1-230ENST00000521724 DYNC1I1O14576 645 aa11.95□□□□□ -0.5
CTNNA1-230ENST00000521724 ABCC1P33527 1531 aa11.94□□□□□ -0.5
CTNNA1-230ENST00000521724 SSFA2P28290 1259 aa11.94□□□□□ -0.5
CTNNA1-230ENST00000521724 UGGT1Q9NYU2 1555 aa11.94□□□□□ -0.5
CTNNA1-230ENST00000521724 MYOM1P52179 1685 aa11.94□□□□□ -0.5
CTNNA1-230ENST00000521724 KIF3BO15066 747 aa11.94□□□□□ -0.5
CTNNA1-230ENST00000521724 ZKSCAN2Q63HK3 967 aa11.94□□□□□ -0.5
CTNNA1-230ENST00000521724 DZIP1LQ8IYY4 767 aaKnown RBP11.94□□□□□ -0.5
CTNNA1-230ENST00000521724 DNAJC5Q9H3Z4 198 aa11.94□□□□□ -0.5
CTNNA1-230ENST00000521724 ZHX1Q9UKY1 873 aaPredicted RBP11.94□□□□□ -0.5
CTNNA1-230ENST00000521724 PTPRTO14522 1441 aa11.94□□□□□ -0.5
CTNNA1-230ENST00000521724 NCLP19338 710 aaKnown RBP11.93□□□□□ -0.5
CTNNA1-230ENST00000521724 CSPP1Q1MSJ5 1256 aa11.93□□□□□ -0.5
CTNNA1-230ENST00000521724 CNKSR2Q8WXI2 1034 aa11.93□□□□□ -0.5
CTNNA1-230ENST00000521724 NECTIN2Q92692 538 aa11.93□□□□□ -0.5
CTNNA1-230ENST00000521724 PRDM10Q9NQV6 1147 aa11.93□□□□□ -0.5
CTNNA1-230ENST00000521724 K7ELQ4 463 aaPredicted RBP11.93□□□□□ -0.5
CTNNA1-230ENST00000521724 VASPP50552 380 aaPredicted RBP11.93□□□□□ -0.5
CTNNA1-230ENST00000521724 AK9Q5TCS8 1911 aa11.93□□□□□ -0.5
CTNNA1-230ENST00000521724 HDAC1Q13547 482 aaPredicted RBP11.92□□□□□ -0.5
CTNNA1-230ENST00000521724 TCP11L2Q8N4U5 519 aa11.92□□□□□ -0.5
CTNNA1-230ENST00000521724 SPHKAPQ2M3C7 1700 aa11.92□□□□□ -0.5
CTNNA1-230ENST00000521724 TRPM2O94759 1503 aa11.92□□□□□ -0.5
CTNNA1-230ENST00000521724 CD2BP2O95400 341 aaKnown RBP11.92□□□□□ -0.5
CTNNA1-230ENST00000521724 BAG4O95429 457 aaKnown RBP11.91□□□□□ -0.5
CTNNA1-230ENST00000521724 ZNF445P59923 1031 aa11.91□□□□□ -0.5
CTNNA1-230ENST00000521724 CAVIN1Q6NZI2 390 aaKnown RBP11.91□□□□□ -0.5
CTNNA1-230ENST00000521724 WDR63Q8IWG1 891 aa11.91□□□□□ -0.5
CTNNA1-230ENST00000521724 RUNDC1Q96C34 613 aa11.91□□□□□ -0.5
CTNNA1-230ENST00000521724 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.91□□□□□ -0.5
CTNNA1-230ENST00000521724 TNNT2P45379 298 aaPredicted RBP11.91□□□□□ -0.5
CTNNA1-230ENST00000521724 SAMD1Q6SPF0 538 aaPredicted RBP11.91□□□□□ -0.5
CTNNA1-230ENST00000521724 ZKSCAN5Q9Y2L8 839 aa11.91□□□□□ -0.5
CTNNA1-230ENST00000521724 CLEC17AQ6ZS10 378 aa11.9□□□□□ -0.5
CTNNA1-230ENST00000521724 ITPRIPQ8IWB1 547 aa11.9□□□□□ -0.5
CTNNA1-230ENST00000521724 ERVK-7P63135 1459 aa11.9□□□□□ -0.5
CTNNA1-230ENST00000521724 ZSCAN23Q3MJ62 389 aa11.9□□□□□ -0.5
CTNNA1-230ENST00000521724 PDLIM2Q96JY6 352 aa11.9□□□□□ -0.5
CTNNA1-230ENST00000521724 CEP152O94986 1710 aa11.9□□□□□ -0.5
CTNNA1-230ENST00000521724 MCTP1Q6DN14 999 aa11.89□□□□□ -0.51
CTNNA1-230ENST00000521724 SASS6Q6UVJ0 657 aa11.89□□□□□ -0.51
CTNNA1-230ENST00000521724 KIF2CQ99661 725 aa11.89□□□□□ -0.51
CTNNA1-230ENST00000521724 RBSNQ9H1K0 784 aa11.89□□□□□ -0.51
CTNNA1-230ENST00000521724 DDX19BQ9UMR2 479 aa11.89□□□□□ -0.51
CTNNA1-230ENST00000521724 POLR3AO14802 1390 aaPredicted RBP11.89□□□□□ -0.51
CTNNA1-230ENST00000521724 ZFYVE16Q7Z3T8 1539 aa11.89□□□□□ -0.51
CTNNA1-230ENST00000521724 GAS2L2Q8NHY3 880 aa11.89□□□□□ -0.51
CTNNA1-230ENST00000521724 MCM5P33992 734 aa11.88□□□□□ -0.51
CTNNA1-230ENST00000521724 FGD1P98174 961 aa11.88□□□□□ -0.51
CTNNA1-230ENST00000521724 CCDC94Q9BW85 323 aaPredicted RBP11.88□□□□□ -0.51
CTNNA1-230ENST00000521724 LNPKQ9C0E8 428 aa11.88□□□□□ -0.51
CTNNA1-230ENST00000521724 RBM42Q9BTD8 480 aaKnown RBP11.88□□□□□ -0.51
CTNNA1-230ENST00000521724 ZBTB7CA1YPR0 619 aa11.88□□□□□ -0.51
CTNNA1-230ENST00000521724 PDIA4P13667 645 aaKnown RBP11.88□□□□□ -0.51
CTNNA1-230ENST00000521724 PRIM1P49642 420 aaKnown RBP11.88□□□□□ -0.51
CTNNA1-230ENST00000521724 DMTNQ08495 405 aa11.88□□□□□ -0.51
CTNNA1-230ENST00000521724 SMC4Q9NTJ3 1288 aa11.88□□□□□ -0.51
CTNNA1-230ENST00000521724 UTP14CQ5TAP6 766 aaKnown RBP11.87□□□□□ -0.51
CTNNA1-230ENST00000521724 SLC12A5Q9H2X9 1139 aa11.87□□□□□ -0.51
CTNNA1-230ENST00000521724 C1orf115Q9H7X2 142 aa11.87□□□□□ -0.51
CTNNA1-230ENST00000521724 TRIM27P14373 513 aa11.87□□□□□ -0.51
CTNNA1-230ENST00000521724 KDM5AP29375 1690 aaKnown RBP11.86□□□□□ -0.51
CTNNA1-230ENST00000521724 CCDC39Q9UFE4 941 aa11.86□□□□□ -0.51
CTNNA1-230ENST00000521724 TRAK1Q9UPV9 953 aa11.86□□□□□ -0.51
CTNNA1-230ENST00000521724 NUCB1Q02818 461 aa11.86□□□□□ -0.51
CTNNA1-230ENST00000521724 CHGAP10645 457 aaKnown RBP11.85□□□□□ -0.51
CTNNA1-230ENST00000521724 ZSCAN20P17040 1043 aaPredicted RBP11.85□□□□□ -0.51
CTNNA1-230ENST00000521724 BMP2KLQ5H9B9 411 aa11.85□□□□□ -0.51
CTNNA1-230ENST00000521724 TMEM132EQ6IEE7 984 aa11.85□□□□□ -0.51
CTNNA1-230ENST00000521724 CCDC27Q2M243 656 aa11.85□□□□□ -0.51
CTNNA1-230ENST00000521724 CHD1LQ86WJ1 897 aa11.85□□□□□ -0.51
CTNNA1-230ENST00000521724 STAC3Q96MF2 364 aa11.85□□□□□ -0.51
CTNNA1-230ENST00000521724 LMBRD1Q9NUN5 540 aa11.85□□□□□ -0.51
CTNNA1-230ENST00000521724 ABCA6Q8N139 1617 aa11.85□□□□□ -0.51
CTNNA1-230ENST00000521724 KIF16BQ96L93 1317 aa11.85□□□□□ -0.51
CTNNA1-230ENST00000521724 CFAP65Q6ZU64 1925 aaKnown RBP11.84□□□□□ -0.51
CTNNA1-230ENST00000521724 DEPDC5O75140 1603 aa11.84□□□□□ -0.51
CTNNA1-230ENST00000521724 NUCB2P80303 420 aa11.84□□□□□ -0.51
CTNNA1-230ENST00000521724 DNTTIP2Q5QJE6 756 aaKnown RBP11.84□□□□□ -0.51
CTNNA1-230ENST00000521724 TET3O43151 1660 aa11.84□□□□□ -0.51
CTNNA1-230ENST00000521724 ATF7IPQ6VMQ6 1270 aa11.84□□□□□ -0.51
CTNNA1-230ENST00000521724 MORC1Q86VD1 984 aa11.84□□□□□ -0.51
CTNNA1-230ENST00000521724 KANK1Q14678 1352 aa11.84□□□□□ -0.51
CTNNA1-230ENST00000521724 IQSEC2Q5JU85 1478 aa11.83□□□□□ -0.51
CTNNA1-230ENST00000521724 VWDEQ8N2E2 1590 aa11.83□□□□□ -0.52
CTNNA1-230ENST00000521724 MAP3K4Q9Y6R4 1608 aa11.83□□□□□ -0.52
CTNNA1-230ENST00000521724 TSR2Q969E8 191 aaKnown RBP11.83□□□□□ -0.52
CTNNA1-230ENST00000521724 UHRF1BP1LA0JNW5 1464 aa11.83□□□□□ -0.52
CTNNA1-230ENST00000521724 ATP7AQ04656 1500 aa11.83□□□□□ -0.52
CTNNA1-230ENST00000521724 PRPF40AO75400 957 aaKnown RBP11.82□□□□□ -0.52
CTNNA1-230ENST00000521724 PTMAP06454 111 aaKnown RBP11.82□□□□□ -0.52
CTNNA1-230ENST00000521724 CT47B1P0C2W7 299 aaPredicted RBP11.82□□□□□ -0.52
CTNNA1-230ENST00000521724 ATXN8OSP0DMR3 200 aa11.82□□□□□ -0.52
CTNNA1-230ENST00000521724 NUTM2DQ5VT03 806 aaPredicted RBP11.82□□□□□ -0.52
CTNNA1-230ENST00000521724 TBC1D9Q6ZT07 1266 aa11.82□□□□□ -0.52
CTNNA1-230ENST00000521724 ZBTB40Q9NUA8 1239 aa11.82□□□□□ -0.52
CTNNA1-230ENST00000521724 ARHGAP31Q2M1Z3 1444 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms