RNA–Protein interactions for RNA: ENST00000521683.5

CTNNA1-229, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-229ENST00000521683 ZRANB1Q9UGI0 708 aa12.98□□□□□ -0.33
CTNNA1-229ENST00000521683 NGDNQ8NEJ9 315 aaKnown RBP12.97□□□□□ -0.33
CTNNA1-229ENST00000521683 TOPAZ1Q8N9V7 1692 aa12.96□□□□□ -0.33
CTNNA1-229ENST00000521683 PLEKHG5O94827 1062 aa12.96□□□□□ -0.33
CTNNA1-229ENST00000521683 CCDC9Q9Y3X0 531 aaKnown RBP12.96□□□□□ -0.33
CTNNA1-229ENST00000521683 KRT27Q7Z3Y8 459 aa12.95□□□□□ -0.34
CTNNA1-229ENST00000521683 NUDT16Q96DE0 195 aaKnown RBP12.95□□□□□ -0.34
CTNNA1-229ENST00000521683 BTG4Q9NY30 223 aa12.95□□□□□ -0.34
CTNNA1-229ENST00000521683 POLR3AO14802 1390 aaPredicted RBP12.94□□□□□ -0.34
CTNNA1-229ENST00000521683 PHRF1Q9P1Y6 1649 aaKnown RBP12.93□□□□□ -0.34
CTNNA1-229ENST00000521683 PAK3O75914 559 aaPredicted RBP12.93□□□□□ -0.34
CTNNA1-229ENST00000521683 SF3B2Q13435 895 aaKnown RBP12.93□□□□□ -0.34
CTNNA1-229ENST00000521683 CDK19Q9BWU1 502 aa12.92□□□□□ -0.34
CTNNA1-229ENST00000521683 PRDM11Q9NQV5 511 aa12.92□□□□□ -0.34
CTNNA1-229ENST00000521683 SPATA31A5Q5VU36 1347 aa12.91□□□□□ -0.34
CTNNA1-229ENST00000521683 SPATA31A7Q8IWB4 1347 aa12.91□□□□□ -0.34
CTNNA1-229ENST00000521683 PLEKHG3A1L390 1219 aa12.91□□□□□ -0.34
CTNNA1-229ENST00000521683 FAM98CQ17RN3 349 aaKnown RBP12.91□□□□□ -0.34
CTNNA1-229ENST00000521683 CCDC61Q9Y6R9 512 aa12.91□□□□□ -0.34
CTNNA1-229ENST00000521683 THSD7AQ9UPZ6 1657 aa12.91□□□□□ -0.34
CTNNA1-229ENST00000521683 DEFB132Q7Z7B7 95 aa12.9□□□□□ -0.34
CTNNA1-229ENST00000521683 KIAA0232Q92628 1395 aa12.9□□□□□ -0.34
CTNNA1-229ENST00000521683 ACEP12821 1306 aa12.89□□□□□ -0.35
CTNNA1-229ENST00000521683 A0A0G2JS52 829 aa12.89□□□□□ -0.35
CTNNA1-229ENST00000521683 MYT1Q01538 1121 aa12.89□□□□□ -0.35
CTNNA1-229ENST00000521683 NBPF8Q3BBV2 869 aa12.89□□□□□ -0.35
CTNNA1-229ENST00000521683 NRKQ7Z2Y5 1582 aa12.89□□□□□ -0.35
CTNNA1-229ENST00000521683 NBPF1Q3BBV0 1214 aa12.88□□□□□ -0.35
CTNNA1-229ENST00000521683 BRD4O60885 1362 aaPredicted RBP12.88□□□□□ -0.35
CTNNA1-229ENST00000521683 RGPD1P0DJD0 1748 aa12.88□□□□□ -0.35
CTNNA1-229ENST00000521683 USP19O94966 1318 aa12.88□□□□□ -0.35
CTNNA1-229ENST00000521683 CENPJQ9HC77 1338 aaPredicted RBP12.88□□□□□ -0.35
CTNNA1-229ENST00000521683 BAG6P46379 1132 aa12.87□□□□□ -0.35
CTNNA1-229ENST00000521683 DISP2A7MBM2 1401 aa12.87□□□□□ -0.35
CTNNA1-229ENST00000521683 SPATA31A1Q5TZJ5 1347 aa12.87□□□□□ -0.35
CTNNA1-229ENST00000521683 CPDO75976 1380 aa12.86□□□□□ -0.35
CTNNA1-229ENST00000521683 PPIP5K1Q6PFW1 1433 aa12.86□□□□□ -0.35
CTNNA1-229ENST00000521683 QRICH2Q9H0J4 1663 aa12.86□□□□□ -0.35
CTNNA1-229ENST00000521683 ZC3H6P61129 1189 aaKnown RBP12.85□□□□□ -0.35
CTNNA1-229ENST00000521683 CHRNA2Q15822 529 aa12.85□□□□□ -0.35
CTNNA1-229ENST00000521683 LMO7Q8WWI1 1683 aa12.85□□□□□ -0.35
CTNNA1-229ENST00000521683 SSH2Q76I76 1423 aa12.85□□□□□ -0.35
CTNNA1-229ENST00000521683 LRP5O75197 1615 aa12.84□□□□□ -0.35
CTNNA1-229ENST00000521683 SRPK2P78362 688 aaKnown RBP12.84□□□□□ -0.35
CTNNA1-229ENST00000521683 TNS1Q9HBL0 1735 aaKnown RBP12.84□□□□□ -0.35
CTNNA1-229ENST00000521683 NUTM2GQ5VZR2 741 aa12.83□□□□□ -0.36
CTNNA1-229ENST00000521683 NLRP13Q86W25 1043 aa12.83□□□□□ -0.36
CTNNA1-229ENST00000521683 ABTB2Q8N961 1025 aa12.83□□□□□ -0.36
CTNNA1-229ENST00000521683 STRN4Q9NRL3 753 aa12.83□□□□□ -0.36
CTNNA1-229ENST00000521683 CAMTA1Q9Y6Y1 1673 aa12.83□□□□□ -0.36
CTNNA1-229ENST00000521683 USP6P35125 1406 aa12.82□□□□□ -0.36
CTNNA1-229ENST00000521683 TRPM1Q7Z4N2 1603 aa12.82□□□□□ -0.36
CTNNA1-229ENST00000521683 BARGINQ6ZT62 677 aa12.82□□□□□ -0.36
CTNNA1-229ENST00000521683 L3MBTL2Q969R5 705 aa12.82□□□□□ -0.36
CTNNA1-229ENST00000521683 CABP2Q9NPB3 220 aa12.82□□□□□ -0.36
CTNNA1-229ENST00000521683 GCP02774 474 aa12.81□□□□□ -0.36
CTNNA1-229ENST00000521683 SLIT3O75094 1523 aa12.81□□□□□ -0.36
CTNNA1-229ENST00000521683 FAM182BQ5T319 152 aa12.8□□□□□ -0.36
CTNNA1-229ENST00000521683 FAM196AQ6ZSG2 479 aa12.8□□□□□ -0.36
CTNNA1-229ENST00000521683 COL5A2P05997 1499 aaPredicted RBP12.79□□□□□ -0.36
CTNNA1-229ENST00000521683 EVA1CP58658 441 aa12.79□□□□□ -0.36
CTNNA1-229ENST00000521683 EN1Q05925 392 aaPredicted RBP12.79□□□□□ -0.36
CTNNA1-229ENST00000521683 TCP11L2Q8N4U5 519 aa12.79□□□□□ -0.36
CTNNA1-229ENST00000521683 THRAP3Q9Y2W1 955 aaKnown RBP12.79□□□□□ -0.36
CTNNA1-229ENST00000521683 EVC2Q86UK5 1308 aa12.79□□□□□ -0.36
CTNNA1-229ENST00000521683 PARD3Q8TEW0 1356 aa12.79□□□□□ -0.36
CTNNA1-229ENST00000521683 LARP1Q6PKG0 1096 aaKnown RBP12.78□□□□□ -0.36
CTNNA1-229ENST00000521683 CABP1Q9NZU7 370 aa12.78□□□□□ -0.36
CTNNA1-229ENST00000521683 ROCK2O75116 1388 aaKnown RBP12.78□□□□□ -0.36
CTNNA1-229ENST00000521683 PIK3C2AO00443 1686 aa12.77□□□□□ -0.36
CTNNA1-229ENST00000521683 PARP4Q9UKK3 1724 aaKnown RBP12.77□□□□□ -0.36
CTNNA1-229ENST00000521683 USP35Q9P2H5 1018 aa12.77□□□□□ -0.37
CTNNA1-229ENST00000521683 AATKQ6ZMQ8 1374 aa12.77□□□□□ -0.37
CTNNA1-229ENST00000521683 CRB1P82279 1406 aa12.77□□□□□ -0.37
CTNNA1-229ENST00000521683 PSDA5PKW4 1024 aaPredicted RBP12.76□□□□□ -0.37
CTNNA1-229ENST00000521683 NLRP6P59044 892 aa12.76□□□□□ -0.37
CTNNA1-229ENST00000521683 PDE3BQ13370 1112 aa12.76□□□□□ -0.37
CTNNA1-229ENST00000521683 CAMKK2Q96RR4 588 aa12.76□□□□□ -0.37
CTNNA1-229ENST00000521683 C11orf95C9JLR9 678 aaPredicted RBP12.75□□□□□ -0.37
CTNNA1-229ENST00000521683 TRIM37O94972 964 aa12.75□□□□□ -0.37
CTNNA1-229ENST00000521683 EZH2Q15910 746 aaKnown RBP12.75□□□□□ -0.37
CTNNA1-229ENST00000521683 SIN3AQ96ST3 1273 aa12.75□□□□□ -0.37
CTNNA1-229ENST00000521683 SBNO2Q9Y2G9 1366 aa12.75□□□□□ -0.37
CTNNA1-229ENST00000521683 COL18A1P39060 1754 aa12.74□□□□□ -0.37
CTNNA1-229ENST00000521683 AKAP12Q02952 1782 aa12.74□□□□□ -0.37
CTNNA1-229ENST00000521683 RREB1Q92766 1687 aa12.74□□□□□ -0.37
CTNNA1-229ENST00000521683 CPSF1Q10570 1443 aaKnown RBP12.74□□□□□ -0.37
CTNNA1-229ENST00000521683 ZNF692Q9BU19 519 aaPredicted RBP12.74□□□□□ -0.37
CTNNA1-229ENST00000521683 TTC21AQ8NDW8 1320 aa12.73□□□□□ -0.37
CTNNA1-229ENST00000521683 APBA3O96018 575 aa12.73□□□□□ -0.37
CTNNA1-229ENST00000521683 ABCC6O95255 1503 aa12.72□□□□□ -0.37
CTNNA1-229ENST00000521683 OVOS2A0A0G2JMS6 1433 aa12.72□□□□□ -0.37
CTNNA1-229ENST00000521683 OVOS2A0A0J9YW53 1432 aa12.72□□□□□ -0.37
CTNNA1-229ENST00000521683 OVOS2Q6IE36 1432 aa12.72□□□□□ -0.37
CTNNA1-229ENST00000521683 TTC21BQ7Z4L5 1316 aa12.72□□□□□ -0.37
CTNNA1-229ENST00000521683 PEAK1Q9H792 1746 aa12.72□□□□□ -0.37
CTNNA1-229ENST00000521683 NEUROD1Q13562 356 aa12.72□□□□□ -0.37
CTNNA1-229ENST00000521683 R3HDM1Q15032 1099 aaKnown RBP12.72□□□□□ -0.37
CTNNA1-229ENST00000521683 KCNH5Q8NCM2 988 aa12.72□□□□□ -0.37
CTNNA1-229ENST00000521683 LRRC37A3O60309 1634 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms