RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 UPF1Q92900 1129 aaKnown RBP eCLIP24.39■■□□□ 1.49
SQLE-205ENST00000521232 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.38■■□□□ 1.49
SQLE-205ENST00000521232 GJD4Q96KN9 370 aaPredicted RBP24.38■■□□□ 1.49
SQLE-205ENST00000521232 CABP2Q9NPB3 220 aa24.38■■□□□ 1.49
SQLE-205ENST00000521232 FAM83GA6ND36 823 aa24.36■■□□□ 1.49
SQLE-205ENST00000521232 TONSLQ96HA7 1378 aa24.36■■□□□ 1.49
SQLE-205ENST00000521232 PPIP5K1Q6PFW1 1433 aa24.34■■□□□ 1.49
SQLE-205ENST00000521232 EVC2Q86UK5 1308 aa24.34■■□□□ 1.49
SQLE-205ENST00000521232 NWD2Q9ULI1 1742 aa24.32■■□□□ 1.48
SQLE-205ENST00000521232 VPS72Q15906 364 aa24.31■■□□□ 1.48
SQLE-205ENST00000521232 CRYBG1Q9Y4K1 1723 aa24.31■■□□□ 1.48
SQLE-205ENST00000521232 PLCH1Q4KWH8 1693 aa24.3■■□□□ 1.48
SQLE-205ENST00000521232 CARD11Q9BXL7 1154 aa24.3■■□□□ 1.48
SQLE-205ENST00000521232 CABP1Q9NZU7 370 aa24.3■■□□□ 1.48
SQLE-205ENST00000521232 RALGAPBQ86X10 1494 aa24.3■■□□□ 1.48
SQLE-205ENST00000521232 GLI3P10071 1580 aa24.28■■□□□ 1.48
SQLE-205ENST00000521232 ABTB2Q8N961 1025 aa24.27■■□□□ 1.48
SQLE-205ENST00000521232 BRD4O60885 1362 aaPredicted RBP24.27■■□□□ 1.48
SQLE-205ENST00000521232 NUTM2GQ5VZR2 741 aa24.26■■□□□ 1.47
SQLE-205ENST00000521232 BTG4Q9NY30 223 aa24.26■■□□□ 1.47
SQLE-205ENST00000521232 COL14A1Q05707 1796 aaKnown RBP24.26■■□□□ 1.47
SQLE-205ENST00000521232 EP400Q96L91 3159 aa24.24■■□□□ 1.47
SQLE-205ENST00000521232 ONECUT3O60422 494 aaPredicted RBP24.24■■□□□ 1.47
SQLE-205ENST00000521232 ATAD2Q6PL18 1390 aa24.24■■□□□ 1.47
SQLE-205ENST00000521232 SBNO2Q9Y2G9 1366 aa24.24■■□□□ 1.47
SQLE-205ENST00000521232 PRDM11Q9NQV5 511 aa24.23■■□□□ 1.47
SQLE-205ENST00000521232 NRAPQ86VF7 1730 aa24.22■■□□□ 1.47
SQLE-205ENST00000521232 PHRF1Q9P1Y6 1649 aaKnown RBP24.22■■□□□ 1.47
SQLE-205ENST00000521232 USP6P35125 1406 aa24.21■■□□□ 1.47
SQLE-205ENST00000521232 KIAA0232Q92628 1395 aa24.21■■□□□ 1.47
SQLE-205ENST00000521232 NLRP13Q86W25 1043 aa24.21■■□□□ 1.47
SQLE-205ENST00000521232 ZNF692Q9BU19 519 aaPredicted RBP24.21■■□□□ 1.47
SQLE-205ENST00000521232 CCDC9Q9Y3X0 531 aaKnown RBP24.21■■□□□ 1.47
SQLE-205ENST00000521232 USP19O94966 1318 aa24.2■■□□□ 1.46
SQLE-205ENST00000521232 SSH2Q76I76 1423 aa24.19■■□□□ 1.46
SQLE-205ENST00000521232 ZC3H6P61129 1189 aaKnown RBP24.19■■□□□ 1.46
SQLE-205ENST00000521232 SEPT12Q8IYM1 358 aa24.18■■□□□ 1.46
SQLE-205ENST00000521232 CHRNA2Q15822 529 aa24.17■■□□□ 1.46
SQLE-205ENST00000521232 GCP02774 474 aa24.16■■□□□ 1.46
SQLE-205ENST00000521232 SPATA31A5Q5VU36 1347 aa24.15■■□□□ 1.46
SQLE-205ENST00000521232 SPATA31A7Q8IWB4 1347 aa24.15■■□□□ 1.46
SQLE-205ENST00000521232 BRWD3Q6RI45 1802 aa24.15■■□□□ 1.46
SQLE-205ENST00000521232 CPDO75976 1380 aa24.15■■□□□ 1.46
SQLE-205ENST00000521232 NLRP6P59044 892 aa24.14■■□□□ 1.45
SQLE-205ENST00000521232 NRKQ7Z2Y5 1582 aa24.14■■□□□ 1.45
SQLE-205ENST00000521232 AKAP12Q02952 1782 aa24.14■■□□□ 1.45
SQLE-205ENST00000521232 CPSF1Q10570 1443 aaKnown RBP24.13■■□□□ 1.45
SQLE-205ENST00000521232 CCDC125Q86Z20 511 aa24.13■■□□□ 1.45
SQLE-205ENST00000521232 TTC21BQ7Z4L5 1316 aa24.12■■□□□ 1.45
SQLE-205ENST00000521232 CLSPNQ9HAW4 1339 aa24.12■■□□□ 1.45
SQLE-205ENST00000521232 PUS7Q96PZ0 661 aaKnown RBP24.12■■□□□ 1.45
SQLE-205ENST00000521232 PCGF6Q9BYE7 350 aa24.12■■□□□ 1.45
SQLE-205ENST00000521232 TIMELESSQ9UNS1 1208 aa24.12■■□□□ 1.45
SQLE-205ENST00000521232 FAM98CQ17RN3 349 aaKnown RBP24.11■■□□□ 1.45
SQLE-205ENST00000521232 TTC21AQ8NDW8 1320 aa24.1■■□□□ 1.45
SQLE-205ENST00000521232 ST20-MTHFSA0A0A6YYL1 179 aa24.09■■□□□ 1.45
SQLE-205ENST00000521232 KRT27Q7Z3Y8 459 aa24.09■■□□□ 1.45
SQLE-205ENST00000521232 TESK2Q96S53 571 aa24.09■■□□□ 1.45
SQLE-205ENST00000521232 SPATA31A1Q5TZJ5 1347 aa24.09■■□□□ 1.45
SQLE-205ENST00000521232 PIK3C2AO00443 1686 aa24.08■■□□□ 1.45
SQLE-205ENST00000521232 KTN1Q86UP2 1357 aaKnown RBP24.08■■□□□ 1.45
SQLE-205ENST00000521232 SLC24A1O60721 1099 aa24.08■■□□□ 1.45
SQLE-205ENST00000521232 STRN4Q9NRL3 753 aa24.08■■□□□ 1.45
SQLE-205ENST00000521232 SLIT3O75094 1523 aa24.08■■□□□ 1.45
SQLE-205ENST00000521232 CAMTA1Q9Y6Y1 1673 aa24.08■■□□□ 1.44
SQLE-205ENST00000521232 EVA1CP58658 441 aa24.07■■□□□ 1.44
SQLE-205ENST00000521232 LMO7Q8WWI1 1683 aa24.06■■□□□ 1.44
SQLE-205ENST00000521232 A0A0G2JS52 829 aa24.05■■□□□ 1.44
SQLE-205ENST00000521232 MYT1Q01538 1121 aa24.05■■□□□ 1.44
SQLE-205ENST00000521232 TMC1Q8TDI8 760 aa24.05■■□□□ 1.44
SQLE-205ENST00000521232 SLC12A5Q9H2X9 1139 aa24.05■■□□□ 1.44
SQLE-205ENST00000521232 CD163L1Q9NR16 1453 aa24.05■■□□□ 1.44
SQLE-205ENST00000521232 MON2Q7Z3U7 1717 aa24.04■■□□□ 1.44
SQLE-205ENST00000521232 AATKQ6ZMQ8 1374 aa24.03■■□□□ 1.44
SQLE-205ENST00000521232 LARP1Q6PKG0 1096 aaKnown RBP24.02■■□□□ 1.44
SQLE-205ENST00000521232 HDGFL2Q7Z4V5 671 aaPredicted RBP24.02■■□□□ 1.44
SQLE-205ENST00000521232 KCNH5Q8NCM2 988 aa24.02■■□□□ 1.44
SQLE-205ENST00000521232 BLMP54132 1417 aaPredicted RBP24.01■■□□□ 1.43
SQLE-205ENST00000521232 THSD7AQ9UPZ6 1657 aa24.01■■□□□ 1.43
SQLE-205ENST00000521232 BARGINQ6ZT62 677 aa24■■□□□ 1.43
SQLE-205ENST00000521232 TERF2IPQ9NYB0 399 aa24■■□□□ 1.43
SQLE-205ENST00000521232 ARHGEF25Q86VW2 580 aa23.99■■□□□ 1.43
SQLE-205ENST00000521232 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.99■■□□□ 1.43
SQLE-205ENST00000521232 USP35Q9P2H5 1018 aa23.99■■□□□ 1.43
SQLE-205ENST00000521232 USP31Q70CQ4 1352 aa23.99■■□□□ 1.43
SQLE-205ENST00000521232 USP47Q96K76 1375 aa23.99■■□□□ 1.43
SQLE-205ENST00000521232 COL5A2P05997 1499 aaPredicted RBP23.99■■□□□ 1.43
SQLE-205ENST00000521232 COL18A1P39060 1754 aa23.98■■□□□ 1.43
SQLE-205ENST00000521232 ZBTB7CA1YPR0 619 aa23.97■■□□□ 1.43
SQLE-205ENST00000521232 TCP11L2Q8N4U5 519 aa23.97■■□□□ 1.43
SQLE-205ENST00000521232 NINLQ9Y2I6 1382 aa23.97■■□□□ 1.43
SQLE-205ENST00000521232 THRAP3Q9Y2W1 955 aaKnown RBP23.97■■□□□ 1.43
SQLE-205ENST00000521232 ZRANB1Q9UGI0 708 aa23.96■■□□□ 1.43
SQLE-205ENST00000521232 AXIN2Q9Y2T1 843 aa23.96■■□□□ 1.43
SQLE-205ENST00000521232 EDC4Q6P2E9 1401 aaKnown RBP23.95■■□□□ 1.42
SQLE-205ENST00000521232 A0A1W2PP64 1363 aa23.95■■□□□ 1.42
SQLE-205ENST00000521232 TMF1P82094 1093 aa23.95■■□□□ 1.42
SQLE-205ENST00000521232 NME9Q86XW9 330 aa23.95■■□□□ 1.42
SQLE-205ENST00000521232 SF3B2Q13435 895 aaKnown RBP23.94■■□□□ 1.42
SQLE-205ENST00000521232 CRB1P82279 1406 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms