RNA–Protein interactions for RNA: ENST00000521127.1

SNHG6-204, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-204ENST00000521127 BAG6P46379 1132 aa27.44■■□□□ 1.98
SNHG6-204ENST00000521127 EIF3AQ14152 1382 aaKnown RBP27.44■■□□□ 1.98
SNHG6-204ENST00000521127 SPATA31A5Q5VU36 1347 aa27.42■■□□□ 1.98
SNHG6-204ENST00000521127 SPATA31A7Q8IWB4 1347 aa27.42■■□□□ 1.98
SNHG6-204ENST00000521127 CRYBG1Q9Y4K1 1723 aa27.42■■□□□ 1.98
SNHG6-204ENST00000521127 PSDA5PKW4 1024 aaPredicted RBP27.42■■□□□ 1.98
SNHG6-204ENST00000521127 FAM182BQ5T319 152 aa27.42■■□□□ 1.98
SNHG6-204ENST00000521127 DCAF11Q8TEB1 546 aa27.42■■□□□ 1.98
SNHG6-204ENST00000521127 NGDNQ8NEJ9 315 aaKnown RBP27.41■■□□□ 1.98
SNHG6-204ENST00000521127 LRP5O75197 1615 aa27.41■■□□□ 1.98
SNHG6-204ENST00000521127 PAK3O75914 559 aaPredicted RBP27.39■■□□□ 1.98
SNHG6-204ENST00000521127 EN1Q05925 392 aaPredicted RBP27.38■■□□□ 1.97
SNHG6-204ENST00000521127 HRCP23327 699 aa27.37■■□□□ 1.97
SNHG6-204ENST00000521127 PRDM11Q9NQV5 511 aa27.37■■□□□ 1.97
SNHG6-204ENST00000521127 THSD7AQ9UPZ6 1657 aa27.36■■□□□ 1.97
SNHG6-204ENST00000521127 ATP7BP35670 1465 aa27.34■■□□□ 1.97
SNHG6-204ENST00000521127 RGPD1P0DJD0 1748 aa27.34■■□□□ 1.97
SNHG6-204ENST00000521127 NUDT16Q96DE0 195 aaKnown RBP27.34■■□□□ 1.97
SNHG6-204ENST00000521127 STAC3Q96MF2 364 aa27.33■■□□□ 1.97
SNHG6-204ENST00000521127 KIAA0232Q92628 1395 aa27.33■■□□□ 1.97
SNHG6-204ENST00000521127 ARHGEF28Q8N1W1 1705 aaKnown RBP27.33■■□□□ 1.96
SNHG6-204ENST00000521127 CHRNA2Q15822 529 aa27.32■■□□□ 1.96
SNHG6-204ENST00000521127 SPATA31A1Q5TZJ5 1347 aa27.31■■□□□ 1.96
SNHG6-204ENST00000521127 DISP2A7MBM2 1401 aa27.29■■□□□ 1.96
SNHG6-204ENST00000521127 ITSN1Q15811 1721 aa27.29■■□□□ 1.96
SNHG6-204ENST00000521127 TNS1Q9HBL0 1735 aaKnown RBP27.29■■□□□ 1.96
SNHG6-204ENST00000521127 NUTM2GQ5VZR2 741 aa27.28■■□□□ 1.96
SNHG6-204ENST00000521127 PHRF1Q9P1Y6 1649 aaKnown RBP27.27■■□□□ 1.96
SNHG6-204ENST00000521127 ZC3H6P61129 1189 aaKnown RBP27.27■■□□□ 1.96
SNHG6-204ENST00000521127 R3HDM1Q15032 1099 aaKnown RBP27.27■■□□□ 1.96
SNHG6-204ENST00000521127 CDK19Q9BWU1 502 aa27.27■■□□□ 1.96
SNHG6-204ENST00000521127 STRN4Q9NRL3 753 aa27.27■■□□□ 1.96
SNHG6-204ENST00000521127 EZH2Q15910 746 aaKnown RBP27.26■■□□□ 1.95
SNHG6-204ENST00000521127 POLR3AO14802 1390 aaPredicted RBP27.23■■□□□ 1.95
SNHG6-204ENST00000521127 ACEP12821 1306 aa27.23■■□□□ 1.95
SNHG6-204ENST00000521127 TRIM37O94972 964 aa27.23■■□□□ 1.95
SNHG6-204ENST00000521127 NBPF8Q3BBV2 869 aa27.23■■□□□ 1.95
SNHG6-204ENST00000521127 CAMKK2Q96RR4 588 aa27.23■■□□□ 1.95
SNHG6-204ENST00000521127 FAM196AQ6ZSG2 479 aa27.22■■□□□ 1.95
SNHG6-204ENST00000521127 TOPAZ1Q8N9V7 1692 aa27.21■■□□□ 1.95
SNHG6-204ENST00000521127 PLEKHG3A1L390 1219 aa27.2■■□□□ 1.94
SNHG6-204ENST00000521127 USP35Q9P2H5 1018 aa27.2■■□□□ 1.94
SNHG6-204ENST00000521127 CCDC61Q9Y6R9 512 aa27.2■■□□□ 1.94
SNHG6-204ENST00000521127 SSH2Q76I76 1423 aa27.18■■□□□ 1.94
SNHG6-204ENST00000521127 CAMTA1Q9Y6Y1 1673 aa27.17■■□□□ 1.94
SNHG6-204ENST00000521127 EVA1CP58658 441 aa27.17■■□□□ 1.94
SNHG6-204ENST00000521127 BARGINQ6ZT62 677 aa27.17■■□□□ 1.94
SNHG6-204ENST00000521127 APBA3O96018 575 aa27.16■■□□□ 1.94
SNHG6-204ENST00000521127 LARP1Q6PKG0 1096 aaKnown RBP27.16■■□□□ 1.94
SNHG6-204ENST00000521127 NRKQ7Z2Y5 1582 aa27.16■■□□□ 1.94
SNHG6-204ENST00000521127 ABTB2Q8N961 1025 aa27.15■■□□□ 1.94
SNHG6-204ENST00000521127 USP19O94966 1318 aa27.14■■□□□ 1.93
SNHG6-204ENST00000521127 CPDO75976 1380 aa27.13■■□□□ 1.93
SNHG6-204ENST00000521127 PDE3BQ13370 1112 aa27.13■■□□□ 1.93
SNHG6-204ENST00000521127 NBPF1Q3BBV0 1214 aa27.13■■□□□ 1.93
SNHG6-204ENST00000521127 LMO7Q8WWI1 1683 aa27.12■■□□□ 1.93
SNHG6-204ENST00000521127 KIAA1210Q9ULL0 1709 aa27.11■■□□□ 1.93
SNHG6-204ENST00000521127 TCP11L2Q8N4U5 519 aa27.11■■□□□ 1.93
SNHG6-204ENST00000521127 PARD3Q8TEW0 1356 aa27.1■■□□□ 1.93
SNHG6-204ENST00000521127 GCP02774 474 aa27.08■■□□□ 1.93
SNHG6-204ENST00000521127 RREB1Q92766 1687 aa27.08■■□□□ 1.92
SNHG6-204ENST00000521127 NLRP13Q86W25 1043 aa27.07■■□□□ 1.92
SNHG6-204ENST00000521127 PPIP5K1Q6PFW1 1433 aa27.06■■□□□ 1.92
SNHG6-204ENST00000521127 SRPK2P78362 688 aaKnown RBP27.05■■□□□ 1.92
SNHG6-204ENST00000521127 CABP2Q9NPB3 220 aa27.05■■□□□ 1.92
SNHG6-204ENST00000521127 NUP188Q5SRE5 1749 aa27.04■■□□□ 1.92
SNHG6-204ENST00000521127 THRAP3Q9Y2W1 955 aaKnown RBP27.04■■□□□ 1.92
SNHG6-204ENST00000521127 COL5A2P05997 1499 aaPredicted RBP27.03■■□□□ 1.92
SNHG6-204ENST00000521127 CENPJQ9HC77 1338 aaPredicted RBP27.02■■□□□ 1.92
SNHG6-204ENST00000521127 PARP4Q9UKK3 1724 aaKnown RBP27.01■■□□□ 1.91
SNHG6-204ENST00000521127 NBPF14Q5TI25 921 aa26.99■■□□□ 1.91
SNHG6-204ENST00000521127 BRD4O60885 1362 aaPredicted RBP26.98■■□□□ 1.91
SNHG6-204ENST00000521127 CABP1Q9NZU7 370 aa26.98■■□□□ 1.91
SNHG6-204ENST00000521127 CRB1P82279 1406 aa26.98■■□□□ 1.91
SNHG6-204ENST00000521127 ZBTB7CA1YPR0 619 aa26.97■■□□□ 1.91
SNHG6-204ENST00000521127 USP6P35125 1406 aa26.97■■□□□ 1.91
SNHG6-204ENST00000521127 NLRP6P59044 892 aa26.96■■□□□ 1.91
SNHG6-204ENST00000521127 PEAK1Q9H792 1746 aa26.95■■□□□ 1.9
SNHG6-204ENST00000521127 AATKQ6ZMQ8 1374 aa26.95■■□□□ 1.9
SNHG6-204ENST00000521127 QRICH2Q9H0J4 1663 aa26.94■■□□□ 1.9
SNHG6-204ENST00000521127 SLIT3O75094 1523 aa26.94■■□□□ 1.9
SNHG6-204ENST00000521127 COL18A1P39060 1754 aa26.92■■□□□ 1.9
SNHG6-204ENST00000521127 OVOS2A0A0G2JMS6 1433 aa26.91■■□□□ 1.9
SNHG6-204ENST00000521127 OVOS2A0A0J9YW53 1432 aa26.91■■□□□ 1.9
SNHG6-204ENST00000521127 OVOS2Q6IE36 1432 aa26.91■■□□□ 1.9
SNHG6-204ENST00000521127 C11orf95C9JLR9 678 aaPredicted RBP26.91■■□□□ 1.9
SNHG6-204ENST00000521127 SBF2Q86WG5 1849 aa26.9■■□□□ 1.9
SNHG6-204ENST00000521127 PTF1AQ7RTS3 328 aa26.9■■□□□ 1.9
SNHG6-204ENST00000521127 AXIN2Q9Y2T1 843 aa26.9■■□□□ 1.9
SNHG6-204ENST00000521127 LRRC37A3O60309 1634 aa26.9■■□□□ 1.9
SNHG6-204ENST00000521127 SPON1Q9HCB6 807 aa26.89■■□□□ 1.9
SNHG6-204ENST00000521127 PIK3C2AO00443 1686 aa26.89■■□□□ 1.89
SNHG6-204ENST00000521127 KCNQ2O43526 872 aa26.88■■□□□ 1.89
SNHG6-204ENST00000521127 DDB1Q16531 1140 aa26.88■■□□□ 1.89
SNHG6-204ENST00000521127 TOM1L2Q6ZVM7 507 aa26.88■■□□□ 1.89
SNHG6-204ENST00000521127 PLSCR1O15162 318 aa26.87■■□□□ 1.89
SNHG6-204ENST00000521127 ANO8Q9HCE9 1232 aaPredicted RBP26.86■■□□□ 1.89
SNHG6-204ENST00000521127 MARCH10Q8NA82 808 aaPredicted RBP26.85■■□□□ 1.89
SNHG6-204ENST00000521127 L3MBTL2Q969R5 705 aa26.85■■□□□ 1.89
SNHG6-204ENST00000521127 WDR17Q8IZU2 1322 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms