RNA–Protein interactions for RNA: ENST00000520539.5

UBR5-207, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBR5, Length 10,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-207ENST00000520539 USH1CQ9Y6N9 552 aa18.29■□□□□ 0.52
UBR5-207ENST00000520539 IPO4Q8TEX9 1081 aaKnown RBP18.29■□□□□ 0.52
UBR5-207ENST00000520539 ZFYP08048 801 aaPredicted RBP18.29■□□□□ 0.52
UBR5-207ENST00000520539 TDO2P48775 406 aa18.29■□□□□ 0.52
UBR5-207ENST00000520539 SH2D4BQ5SQS7 431 aa18.28■□□□□ 0.52
UBR5-207ENST00000520539 KIF18AQ8NI77 898 aa18.28■□□□□ 0.52
UBR5-207ENST00000520539 MCM5P33992 734 aa18.28■□□□□ 0.52
UBR5-207ENST00000520539 CWC22Q9HCG8 908 aaKnown RBP18.28■□□□□ 0.52
UBR5-207ENST00000520539 LRRFIP2Q9Y608 721 aaKnown RBP18.28■□□□□ 0.52
UBR5-207ENST00000520539 PLEKHG5O94827 1062 aa18.28■□□□□ 0.52
UBR5-207ENST00000520539 CEP83Q9Y592 693 aa18.28■□□□□ 0.52
UBR5-207ENST00000520539 ANKRD45Q5TZF3 282 aa18.27■□□□□ 0.52
UBR5-207ENST00000520539 TRAK2O60296 914 aa18.27■□□□□ 0.52
UBR5-207ENST00000520539 ESPNB1AK53 854 aa18.27■□□□□ 0.52
UBR5-207ENST00000520539 ZNF397Q8NF99 534 aaPredicted RBP18.27■□□□□ 0.52
UBR5-207ENST00000520539 HIP1O00291 1037 aa18.27■□□□□ 0.51
UBR5-207ENST00000520539 ZSCAN30Q86W11 494 aa18.27■□□□□ 0.51
UBR5-207ENST00000520539 CCDC83Q8IWF9 413 aa18.27■□□□□ 0.51
UBR5-207ENST00000520539 GTPBP4Q9BZE4 634 aaKnown RBP18.27■□□□□ 0.51
UBR5-207ENST00000520539 SERPINC1P01008 464 aa18.27■□□□□ 0.51
UBR5-207ENST00000520539 RRP1P56182 461 aaKnown RBP18.27■□□□□ 0.51
UBR5-207ENST00000520539 ARHGAP29Q52LW3 1261 aa18.27■□□□□ 0.51
UBR5-207ENST00000520539 TCHPQ9BT92 498 aa18.27■□□□□ 0.51
UBR5-207ENST00000520539 NSRP1Q9H0G5 558 aaKnown RBP18.27■□□□□ 0.51
UBR5-207ENST00000520539 GON4LQ3T8J9 2241 aa18.27■□□□□ 0.51
UBR5-207ENST00000520539 C22orf23Q9BZE7 217 aa18.26■□□□□ 0.51
UBR5-207ENST00000520539 TAF4BQ92750 862 aa18.26■□□□□ 0.51
UBR5-207ENST00000520539 LIG1P18858 919 aa18.26■□□□□ 0.51
UBR5-207ENST00000520539 FAM114A2Q9NRY5 505 aa18.26■□□□□ 0.51
UBR5-207ENST00000520539 SKIDA1Q1XH10 827 aa18.26■□□□□ 0.51
UBR5-207ENST00000520539 DYNC1I1O14576 645 aa18.26■□□□□ 0.51
UBR5-207ENST00000520539 FAM193AP78312 1265 aa18.26■□□□□ 0.51
UBR5-207ENST00000520539 FOXD4L6Q3SYB3 417 aaPredicted RBP18.25■□□□□ 0.51
UBR5-207ENST00000520539 FOXD4L3Q6VB84 417 aaPredicted RBP18.25■□□□□ 0.51
UBR5-207ENST00000520539 RSRC1Q96IZ7 334 aaKnown RBP18.25■□□□□ 0.51
UBR5-207ENST00000520539 POTEJP0CG39 1038 aa18.25■□□□□ 0.51
UBR5-207ENST00000520539 SARNPP82979 210 aaKnown RBP18.25■□□□□ 0.51
UBR5-207ENST00000520539 ZBTB17Q13105 803 aa18.25■□□□□ 0.51
UBR5-207ENST00000520539 VPS36Q86VN1 386 aa18.25■□□□□ 0.51
UBR5-207ENST00000520539 TUBB4BP68371 445 aa18.25■□□□□ 0.51
UBR5-207ENST00000520539 MYBBP1AQ9BQG0 1328 aaKnown RBP18.25■□□□□ 0.51
UBR5-207ENST00000520539 SEPT14Q6ZU15 432 aa18.25■□□□□ 0.51
UBR5-207ENST00000520539 CEP57L1Q8IYX8 460 aa18.25■□□□□ 0.51
UBR5-207ENST00000520539 RBM10P98175 930 aaKnown RBP18.25■□□□□ 0.51
UBR5-207ENST00000520539 FERP16591 822 aa18.24■□□□□ 0.51
UBR5-207ENST00000520539 KIF27Q86VH2 1401 aa18.24■□□□□ 0.51
UBR5-207ENST00000520539 UACAQ9BZF9 1416 aa18.24■□□□□ 0.51
UBR5-207ENST00000520539 TNIKQ9UKE5 1360 aa18.24■□□□□ 0.51
UBR5-207ENST00000520539 NEMFO60524 1076 aa18.23■□□□□ 0.51
UBR5-207ENST00000520539 IFIT2P09913 472 aaKnown RBP18.23■□□□□ 0.51
UBR5-207ENST00000520539 SLC4A10Q6U841 1118 aa18.23■□□□□ 0.51
UBR5-207ENST00000520539 MSL1Q68DK7 614 aa18.23■□□□□ 0.51
UBR5-207ENST00000520539 EPB41L2O43491 1005 aaKnown RBP18.22■□□□□ 0.51
UBR5-207ENST00000520539 IFFO1Q0D2I5 559 aa18.22■□□□□ 0.51
UBR5-207ENST00000520539 ANKRD1Q15327 319 aa18.22■□□□□ 0.51
UBR5-207ENST00000520539 DCAF11Q8TEB1 546 aa18.22■□□□□ 0.51
UBR5-207ENST00000520539 NAA15Q9BXJ9 866 aaKnown RBP18.22■□□□□ 0.51
UBR5-207ENST00000520539 A0A1B0GUA9 196 aa18.22■□□□□ 0.51
UBR5-207ENST00000520539 STMN4Q9H169 189 aaPredicted RBP18.22■□□□□ 0.51
UBR5-207ENST00000520539 FMNL2Q96PY5 1086 aa18.21■□□□□ 0.51
UBR5-207ENST00000520539 PPP1R12BO60237 982 aaPredicted RBP18.21■□□□□ 0.51
UBR5-207ENST00000520539 KIF5CO60282 957 aa18.21■□□□□ 0.51
UBR5-207ENST00000520539 MPHOSPH10O00566 681 aaKnown RBP18.21■□□□□ 0.51
UBR5-207ENST00000520539 TNMDQ9H2S6 317 aa18.21■□□□□ 0.51
UBR5-207ENST00000520539 SMTNL1A8MU46 457 aa18.21■□□□□ 0.51
UBR5-207ENST00000520539 CEP112Q8N8E3 955 aa18.21■□□□□ 0.51
UBR5-207ENST00000520539 HOOK3Q86VS8 718 aa18.2■□□□□ 0.5
UBR5-207ENST00000520539 GRPEL1Q9HAV7 217 aa18.2■□□□□ 0.5
UBR5-207ENST00000520539 CDC45O75419 566 aa18.2■□□□□ 0.5
UBR5-207ENST00000520539 EHBP1Q8NDI1 1231 aa18.2■□□□□ 0.5
UBR5-207ENST00000520539 MAPK8IP2Q13387 824 aaPredicted RBP18.2■□□□□ 0.5
UBR5-207ENST00000520539 SENP3-EIF4A1A0A087X0R7 540 aa18.2■□□□□ 0.5
UBR5-207ENST00000520539 ANAPC15P60006 121 aa18.2■□□□□ 0.5
UBR5-207ENST00000520539 NBPF1Q3BBV0 1214 aa18.2■□□□□ 0.5
UBR5-207ENST00000520539 TTC14Q96N46 770 aa18.19■□□□□ 0.5
UBR5-207ENST00000520539 SFPQP23246 707 aaKnown RBP eCLIP18.19■□□□□ 0.53e-6■■■□□ 15.2
UBR5-207ENST00000520539 SLC3A2P08195 630 aaKnown RBP18.19■□□□□ 0.5
UBR5-207ENST00000520539 CCDC158Q5M9N0 1113 aa18.19■□□□□ 0.5
UBR5-207ENST00000520539 STMN1P16949 149 aa18.19■□□□□ 0.5
UBR5-207ENST00000520539 TACC1O75410 805 aa18.18■□□□□ 0.5
UBR5-207ENST00000520539 VPS37DQ86XT2 251 aa18.18■□□□□ 0.5
UBR5-207ENST00000520539 CIZ1Q9ULV3 898 aaPredicted RBP18.18■□□□□ 0.5
UBR5-207ENST00000520539 WDR33Q9C0J8 1336 aaKnown RBP18.18■□□□□ 0.5
UBR5-207ENST00000520539 RNF187Q5TA31 235 aaPredicted RBP18.18■□□□□ 0.5
UBR5-207ENST00000520539 SOGA3Q5TF21 947 aa18.18■□□□□ 0.5
UBR5-207ENST00000520539 PRPF40AO75400 957 aaKnown RBP18.17■□□□□ 0.5
UBR5-207ENST00000520539 SMC6Q96SB8 1091 aa18.17■□□□□ 0.5
UBR5-207ENST00000520539 CAVIN2O95810 425 aa18.17■□□□□ 0.5
UBR5-207ENST00000520539 ZNF526Q8TF50 670 aaPredicted RBP18.17■□□□□ 0.5
UBR5-207ENST00000520539 SMARCC1Q92922 1105 aaPredicted RBP18.17■□□□□ 0.5
UBR5-207ENST00000520539 FBXW7Q969H0 707 aa18.17■□□□□ 0.5
UBR5-207ENST00000520539 ZNF330Q9Y3S2 320 aaPredicted RBP18.17■□□□□ 0.5
UBR5-207ENST00000520539 C9orf78Q9NZ63 289 aaPredicted RBP18.16■□□□□ 0.5
UBR5-207ENST00000520539 MKRN1Q9UHC7 482 aaKnown RBP18.16■□□□□ 0.5
UBR5-207ENST00000520539 AIMP1Q12904 312 aaKnown RBP18.16■□□□□ 0.5
UBR5-207ENST00000520539 GTF2E1P29083 439 aaPredicted RBP18.16■□□□□ 0.5
UBR5-207ENST00000520539 ALS2CR12Q96Q35 445 aa18.15■□□□□ 0.5
UBR5-207ENST00000520539 WASHC2AQ641Q2 1341 aa18.15■□□□□ 0.5
UBR5-207ENST00000520539 ANAPC4Q9UJX5 808 aa18.15■□□□□ 0.5
UBR5-207ENST00000520539 PTPN14Q15678 1187 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms