RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 BRWD3Q6RI45 1802 aa21.96■■□□□ 1.11
CSMD1-207ENST00000520451 NRAPQ86VF7 1730 aa21.95■■□□□ 1.1
CSMD1-207ENST00000520451 COL14A1Q05707 1796 aaKnown RBP21.95■■□□□ 1.1
CSMD1-207ENST00000520451 ONECUT3O60422 494 aaPredicted RBP21.95■■□□□ 1.1
CSMD1-207ENST00000520451 BLMP54132 1417 aaPredicted RBP21.95■■□□□ 1.1
CSMD1-207ENST00000520451 SRCAPQ6ZRS2 3230 aa21.94■■□□□ 1.1
CSMD1-207ENST00000520451 A0A0G2JS52 829 aa21.94■■□□□ 1.1
CSMD1-207ENST00000520451 MYT1Q01538 1121 aa21.94■■□□□ 1.1
CSMD1-207ENST00000520451 CRYBG1Q9Y4K1 1723 aa21.94■■□□□ 1.1
CSMD1-207ENST00000520451 KRT27Q7Z3Y8 459 aa21.93■■□□□ 1.1
CSMD1-207ENST00000520451 PRDM11Q9NQV5 511 aa21.93■■□□□ 1.1
CSMD1-207ENST00000520451 CCDC61Q9Y6R9 512 aa21.93■■□□□ 1.1
CSMD1-207ENST00000520451 TOPAZ1Q8N9V7 1692 aa21.92■■□□□ 1.1
CSMD1-207ENST00000520451 POLR3AO14802 1390 aaPredicted RBP21.92■■□□□ 1.1
CSMD1-207ENST00000520451 ACEP12821 1306 aa21.92■■□□□ 1.1
CSMD1-207ENST00000520451 FAM98CQ17RN3 349 aaKnown RBP21.92■■□□□ 1.1
CSMD1-207ENST00000520451 ZRANB1Q9UGI0 708 aa21.92■■□□□ 1.1
CSMD1-207ENST00000520451 CENPJQ9HC77 1338 aaPredicted RBP21.9■■□□□ 1.1
CSMD1-207ENST00000520451 NBPF8Q3BBV2 869 aa21.9■■□□□ 1.1
CSMD1-207ENST00000520451 NUTM2GQ5VZR2 741 aa21.9■■□□□ 1.1
CSMD1-207ENST00000520451 KIAA0232Q92628 1395 aa21.89■■□□□ 1.1
CSMD1-207ENST00000520451 PLEKHG3A1L390 1219 aa21.89■■□□□ 1.09
CSMD1-207ENST00000520451 SRPK2P78362 688 aaKnown RBP21.89■■□□□ 1.09
CSMD1-207ENST00000520451 SF3B2Q13435 895 aaKnown RBP21.89■■□□□ 1.09
CSMD1-207ENST00000520451 L3MBTL2Q969R5 705 aa21.88■■□□□ 1.09
CSMD1-207ENST00000520451 SPATA31A5Q5VU36 1347 aa21.87■■□□□ 1.09
CSMD1-207ENST00000520451 SPATA31A7Q8IWB4 1347 aa21.87■■□□□ 1.09
CSMD1-207ENST00000520451 DEFB132Q7Z7B7 95 aa21.87■■□□□ 1.09
CSMD1-207ENST00000520451 PHRF1Q9P1Y6 1649 aaKnown RBP21.87■■□□□ 1.09
CSMD1-207ENST00000520451 CHRNA2Q15822 529 aa21.86■■□□□ 1.09
CSMD1-207ENST00000520451 ZC3H6P61129 1189 aaKnown RBP21.85■■□□□ 1.09
CSMD1-207ENST00000520451 CABP2Q9NPB3 220 aa21.85■■□□□ 1.09
CSMD1-207ENST00000520451 PPIP5K1Q6PFW1 1433 aa21.85■■□□□ 1.09
CSMD1-207ENST00000520451 ABTB2Q8N961 1025 aa21.84■■□□□ 1.09
CSMD1-207ENST00000520451 SIN3AQ96ST3 1273 aa21.84■■□□□ 1.09
CSMD1-207ENST00000520451 QRICH2Q9H0J4 1663 aa21.83■■□□□ 1.09
CSMD1-207ENST00000520451 STRN4Q9NRL3 753 aa21.83■■□□□ 1.09
CSMD1-207ENST00000520451 NEUROD1Q13562 356 aa21.81■■□□□ 1.08
CSMD1-207ENST00000520451 SPATA31A1Q5TZJ5 1347 aa21.8■■□□□ 1.08
CSMD1-207ENST00000520451 NRKQ7Z2Y5 1582 aa21.8■■□□□ 1.08
CSMD1-207ENST00000520451 THSD7AQ9UPZ6 1657 aa21.79■■□□□ 1.08
CSMD1-207ENST00000520451 USP19O94966 1318 aa21.79■■□□□ 1.08
CSMD1-207ENST00000520451 TRPM1Q7Z4N2 1603 aa21.78■■□□□ 1.08
CSMD1-207ENST00000520451 FAM182BQ5T319 152 aa21.78■■□□□ 1.08
CSMD1-207ENST00000520451 ROCK2O75116 1388 aaKnown RBP21.77■■□□□ 1.08
CSMD1-207ENST00000520451 BAG6P46379 1132 aa21.77■■□□□ 1.08
CSMD1-207ENST00000520451 EVA1CP58658 441 aa21.77■■□□□ 1.08
CSMD1-207ENST00000520451 NLRP13Q86W25 1043 aa21.77■■□□□ 1.08
CSMD1-207ENST00000520451 CABP1Q9NZU7 370 aa21.77■■□□□ 1.08
CSMD1-207ENST00000520451 CPDO75976 1380 aa21.76■■□□□ 1.07
CSMD1-207ENST00000520451 SSH2Q76I76 1423 aa21.76■■□□□ 1.07
CSMD1-207ENST00000520451 EVC2Q86UK5 1308 aa21.76■■□□□ 1.07
CSMD1-207ENST00000520451 BRD4O60885 1362 aaPredicted RBP21.75■■□□□ 1.07
CSMD1-207ENST00000520451 USP35Q9P2H5 1018 aa21.75■■□□□ 1.07
CSMD1-207ENST00000520451 USP6P35125 1406 aa21.74■■□□□ 1.07
CSMD1-207ENST00000520451 GCP02774 474 aa21.74■■□□□ 1.07
CSMD1-207ENST00000520451 CAMTA1Q9Y6Y1 1673 aa21.73■■□□□ 1.07
CSMD1-207ENST00000520451 LARP1Q6PKG0 1096 aaKnown RBP21.72■■□□□ 1.07
CSMD1-207ENST00000520451 LMO7Q8WWI1 1683 aa21.72■■□□□ 1.07
CSMD1-207ENST00000520451 RGPD1P0DJD0 1748 aa21.72■■□□□ 1.07
CSMD1-207ENST00000520451 NLRP6P59044 892 aa21.71■■□□□ 1.07
CSMD1-207ENST00000520451 EN1Q05925 392 aaPredicted RBP21.7■■□□□ 1.06
CSMD1-207ENST00000520451 BARGINQ6ZT62 677 aa21.7■■□□□ 1.06
CSMD1-207ENST00000520451 ZBTB7CA1YPR0 619 aa21.69■■□□□ 1.06
CSMD1-207ENST00000520451 FAM196AQ6ZSG2 479 aa21.68■■□□□ 1.06
CSMD1-207ENST00000520451 TCP11L2Q8N4U5 519 aa21.68■■□□□ 1.06
CSMD1-207ENST00000520451 COL5A2P05997 1499 aaPredicted RBP21.67■■□□□ 1.06
CSMD1-207ENST00000520451 SLIT3O75094 1523 aa21.66■■□□□ 1.06
CSMD1-207ENST00000520451 DISP2A7MBM2 1401 aa21.66■■□□□ 1.06
CSMD1-207ENST00000520451 PDE3BQ13370 1112 aa21.66■■□□□ 1.06
CSMD1-207ENST00000520451 TNS1Q9HBL0 1735 aaKnown RBP21.66■■□□□ 1.06
CSMD1-207ENST00000520451 PIK3C2AO00443 1686 aa21.66■■□□□ 1.06
CSMD1-207ENST00000520451 PSDA5PKW4 1024 aaPredicted RBP21.65■■□□□ 1.06
CSMD1-207ENST00000520451 TRIM37O94972 964 aa21.65■■□□□ 1.06
CSMD1-207ENST00000520451 AATKQ6ZMQ8 1374 aa21.64■■□□□ 1.06
CSMD1-207ENST00000520451 THRAP3Q9Y2W1 955 aaKnown RBP21.64■■□□□ 1.05
CSMD1-207ENST00000520451 TTC21BQ7Z4L5 1316 aa21.63■■□□□ 1.05
CSMD1-207ENST00000520451 ZNF692Q9BU19 519 aaPredicted RBP21.63■■□□□ 1.05
CSMD1-207ENST00000520451 CRB1P82279 1406 aa21.62■■□□□ 1.05
CSMD1-207ENST00000520451 EZH2Q15910 746 aaKnown RBP21.61■■□□□ 1.05
CSMD1-207ENST00000520451 CARD11Q9BXL7 1154 aa21.61■■□□□ 1.05
CSMD1-207ENST00000520451 AKAP12Q02952 1782 aa21.6■■□□□ 1.05
CSMD1-207ENST00000520451 TONSLQ96HA7 1378 aa21.6■■□□□ 1.05
CSMD1-207ENST00000520451 TTC21AQ8NDW8 1320 aa21.59■■□□□ 1.05
CSMD1-207ENST00000520451 APBA3O96018 575 aa21.59■■□□□ 1.05
CSMD1-207ENST00000520451 CPSF1Q10570 1443 aaKnown RBP21.59■■□□□ 1.05
CSMD1-207ENST00000520451 KTN1Q86UP2 1357 aaKnown RBP21.59■■□□□ 1.05
CSMD1-207ENST00000520451 SBNO2Q9Y2G9 1366 aa21.59■■□□□ 1.05
CSMD1-207ENST00000520451 SOX12O15370 315 aa21.58■■□□□ 1.05
CSMD1-207ENST00000520451 CAMKK2Q96RR4 588 aa21.58■■□□□ 1.05
CSMD1-207ENST00000520451 LRP5O75197 1615 aa21.58■■□□□ 1.04
CSMD1-207ENST00000520451 R3HDM1Q15032 1099 aaKnown RBP21.57■■□□□ 1.04
CSMD1-207ENST00000520451 TOM1L2Q6ZVM7 507 aa21.57■■□□□ 1.04
CSMD1-207ENST00000520451 KCNH5Q8NCM2 988 aa21.57■■□□□ 1.04
CSMD1-207ENST00000520451 PARP4Q9UKK3 1724 aaKnown RBP21.57■■□□□ 1.04
CSMD1-207ENST00000520451 ARHGEF25Q86VW2 580 aa21.56■■□□□ 1.04
CSMD1-207ENST00000520451 AXIN2Q9Y2T1 843 aa21.56■■□□□ 1.04
CSMD1-207ENST00000520451 COL18A1P39060 1754 aa21.56■■□□□ 1.04
CSMD1-207ENST00000520451 PARD3Q8TEW0 1356 aa21.55■■□□□ 1.04
CSMD1-207ENST00000520451 WDR17Q8IZU2 1322 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms