RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 STAC3Q96MF2 364 aa29.31■■■□□ 2.28
HDAC2-207ENST00000520170 NRAPQ86VF7 1730 aa29.31■■■□□ 2.28
HDAC2-207ENST00000520170 PAK3O75914 559 aaPredicted RBP29.3■■■□□ 2.28
HDAC2-207ENST00000520170 FAM98CQ17RN3 349 aaKnown RBP29.28■■■□□ 2.28
HDAC2-207ENST00000520170 COL14A1Q05707 1796 aaKnown RBP29.28■■■□□ 2.28
HDAC2-207ENST00000520170 ARHGEF28Q8N1W1 1705 aaKnown RBP29.27■■■□□ 2.28
HDAC2-207ENST00000520170 ITSN1Q15811 1721 aa29.24■■■□□ 2.27
HDAC2-207ENST00000520170 HRCP23327 699 aa29.23■■■□□ 2.27
HDAC2-207ENST00000520170 NUDT16Q96DE0 195 aaKnown RBP29.23■■■□□ 2.27
HDAC2-207ENST00000520170 CRYBG1Q9Y4K1 1723 aa29.23■■■□□ 2.27
HDAC2-207ENST00000520170 PRDM11Q9NQV5 511 aa29.2■■■□□ 2.26
HDAC2-207ENST00000520170 ATP7BP35670 1465 aa29.18■■■□□ 2.26
HDAC2-207ENST00000520170 CDK19Q9BWU1 502 aa29.18■■■□□ 2.26
HDAC2-207ENST00000520170 SPATA31A5Q5VU36 1347 aa29.18■■■□□ 2.26
HDAC2-207ENST00000520170 SPATA31A7Q8IWB4 1347 aa29.18■■■□□ 2.26
HDAC2-207ENST00000520170 BAG6P46379 1132 aa29.16■■■□□ 2.26
HDAC2-207ENST00000520170 FAM182BQ5T319 152 aa29.16■■■□□ 2.26
HDAC2-207ENST00000520170 NUTM2GQ5VZR2 741 aa29.14■■■□□ 2.26
HDAC2-207ENST00000520170 KIAA0232Q92628 1395 aa29.13■■■□□ 2.25
HDAC2-207ENST00000520170 CHRNA2Q15822 529 aa29.13■■■□□ 2.25
HDAC2-207ENST00000520170 ZC3H6P61129 1189 aaKnown RBP29.11■■■□□ 2.25
HDAC2-207ENST00000520170 PHRF1Q9P1Y6 1649 aaKnown RBP29.11■■■□□ 2.25
HDAC2-207ENST00000520170 STRN4Q9NRL3 753 aa29.1■■■□□ 2.25
HDAC2-207ENST00000520170 KIAA1210Q9ULL0 1709 aa29.1■■■□□ 2.25
HDAC2-207ENST00000520170 ACEP12821 1306 aa29.1■■■□□ 2.25
HDAC2-207ENST00000520170 RGPD1P0DJD0 1748 aa29.09■■■□□ 2.25
HDAC2-207ENST00000520170 NBPF8Q3BBV2 869 aa29.09■■■□□ 2.25
HDAC2-207ENST00000520170 CCDC61Q9Y6R9 512 aa29.09■■■□□ 2.25
HDAC2-207ENST00000520170 THSD7AQ9UPZ6 1657 aa29.09■■■□□ 2.25
HDAC2-207ENST00000520170 PSDA5PKW4 1024 aaPredicted RBP29.08■■■□□ 2.25
HDAC2-207ENST00000520170 TOPAZ1Q8N9V7 1692 aa29.08■■■□□ 2.25
HDAC2-207ENST00000520170 EN1Q05925 392 aaPredicted RBP29.07■■■□□ 2.24
HDAC2-207ENST00000520170 NBPF1Q3BBV0 1214 aa29.07■■■□□ 2.24
HDAC2-207ENST00000520170 SPATA31A1Q5TZJ5 1347 aa29.07■■■□□ 2.24
HDAC2-207ENST00000520170 POLR3AO14802 1390 aaPredicted RBP29.06■■■□□ 2.24
HDAC2-207ENST00000520170 PLEKHG3A1L390 1219 aa29.04■■■□□ 2.24
HDAC2-207ENST00000520170 EVA1CP58658 441 aa29.03■■■□□ 2.24
HDAC2-207ENST00000520170 ABTB2Q8N961 1025 aa29.03■■■□□ 2.24
HDAC2-207ENST00000520170 USP35Q9P2H5 1018 aa29.03■■■□□ 2.24
HDAC2-207ENST00000520170 SRPK2P78362 688 aaKnown RBP29■■■□□ 2.23
HDAC2-207ENST00000520170 LRP5O75197 1615 aa29■■■□□ 2.23
HDAC2-207ENST00000520170 TNS1Q9HBL0 1735 aaKnown RBP29■■■□□ 2.23
HDAC2-207ENST00000520170 TRIM37O94972 964 aa28.97■■■□□ 2.23
HDAC2-207ENST00000520170 NRKQ7Z2Y5 1582 aa28.96■■■□□ 2.23
HDAC2-207ENST00000520170 CENPJQ9HC77 1338 aaPredicted RBP28.96■■■□□ 2.23
HDAC2-207ENST00000520170 SSH2Q76I76 1423 aa28.96■■■□□ 2.23
HDAC2-207ENST00000520170 FAM196AQ6ZSG2 479 aa28.96■■■□□ 2.23
HDAC2-207ENST00000520170 CABP2Q9NPB3 220 aa28.96■■■□□ 2.23
HDAC2-207ENST00000520170 PPIP5K1Q6PFW1 1433 aa28.95■■■□□ 2.23
HDAC2-207ENST00000520170 EZH2Q15910 746 aaKnown RBP28.95■■■□□ 2.22
HDAC2-207ENST00000520170 CAMTA1Q9Y6Y1 1673 aa28.95■■■□□ 2.22
HDAC2-207ENST00000520170 R3HDM1Q15032 1099 aaKnown RBP28.94■■■□□ 2.22
HDAC2-207ENST00000520170 LARP1Q6PKG0 1096 aaKnown RBP28.94■■■□□ 2.22
HDAC2-207ENST00000520170 NLRP13Q86W25 1043 aa28.94■■■□□ 2.22
HDAC2-207ENST00000520170 DISP2A7MBM2 1401 aa28.94■■■□□ 2.22
HDAC2-207ENST00000520170 USP19O94966 1318 aa28.93■■■□□ 2.22
HDAC2-207ENST00000520170 QRICH2Q9H0J4 1663 aa28.93■■■□□ 2.22
HDAC2-207ENST00000520170 BARGINQ6ZT62 677 aa28.92■■■□□ 2.22
HDAC2-207ENST00000520170 CPDO75976 1380 aa28.91■■■□□ 2.22
HDAC2-207ENST00000520170 GCP02774 474 aa28.91■■■□□ 2.22
HDAC2-207ENST00000520170 PDE3BQ13370 1112 aa28.91■■■□□ 2.22
HDAC2-207ENST00000520170 LMO7Q8WWI1 1683 aa28.9■■■□□ 2.22
HDAC2-207ENST00000520170 APBA3O96018 575 aa28.9■■■□□ 2.22
HDAC2-207ENST00000520170 TCP11L2Q8N4U5 519 aa28.89■■■□□ 2.22
HDAC2-207ENST00000520170 CAMKK2Q96RR4 588 aa28.88■■■□□ 2.21
HDAC2-207ENST00000520170 ZBTB7CA1YPR0 619 aa28.87■■■□□ 2.21
HDAC2-207ENST00000520170 CABP1Q9NZU7 370 aa28.87■■■□□ 2.21
HDAC2-207ENST00000520170 NLRP6P59044 892 aa28.84■■■□□ 2.21
HDAC2-207ENST00000520170 L3MBTL2Q969R5 705 aa28.84■■■□□ 2.21
HDAC2-207ENST00000520170 THRAP3Q9Y2W1 955 aaKnown RBP28.83■■■□□ 2.21
HDAC2-207ENST00000520170 BRD4O60885 1362 aaPredicted RBP28.83■■■□□ 2.21
HDAC2-207ENST00000520170 USP6P35125 1406 aa28.82■■■□□ 2.2
HDAC2-207ENST00000520170 COL5A2P05997 1499 aaPredicted RBP28.81■■■□□ 2.2
HDAC2-207ENST00000520170 PARD3Q8TEW0 1356 aa28.79■■■□□ 2.2
HDAC2-207ENST00000520170 PARP4Q9UKK3 1724 aaKnown RBP28.78■■■□□ 2.2
HDAC2-207ENST00000520170 SIN3AQ96ST3 1273 aa28.78■■■□□ 2.2
HDAC2-207ENST00000520170 EVC2Q86UK5 1308 aa28.77■■■□□ 2.2
HDAC2-207ENST00000520170 CRB1P82279 1406 aa28.77■■■□□ 2.2
HDAC2-207ENST00000520170 RREB1Q92766 1687 aa28.77■■■□□ 2.2
HDAC2-207ENST00000520170 TRPM1Q7Z4N2 1603 aa28.76■■■□□ 2.19
HDAC2-207ENST00000520170 AATKQ6ZMQ8 1374 aa28.75■■■□□ 2.19
HDAC2-207ENST00000520170 NUP188Q5SRE5 1749 aa28.74■■■□□ 2.19
HDAC2-207ENST00000520170 SLIT3O75094 1523 aa28.74■■■□□ 2.19
HDAC2-207ENST00000520170 PIK3C2AO00443 1686 aa28.74■■■□□ 2.19
HDAC2-207ENST00000520170 NEUROD1Q13562 356 aa28.73■■■□□ 2.19
HDAC2-207ENST00000520170 TOM1L2Q6ZVM7 507 aa28.72■■■□□ 2.19
HDAC2-207ENST00000520170 COL18A1P39060 1754 aa28.71■■■□□ 2.19
HDAC2-207ENST00000520170 NBPF14Q5TI25 921 aa28.71■■■□□ 2.19
HDAC2-207ENST00000520170 ROCK2O75116 1388 aaKnown RBP28.7■■■□□ 2.18
HDAC2-207ENST00000520170 RGPD5Q99666 1765 aa28.7■■■□□ 2.18
HDAC2-207ENST00000520170 ZNF692Q9BU19 519 aaPredicted RBP28.69■■■□□ 2.18
HDAC2-207ENST00000520170 AXIN2Q9Y2T1 843 aa28.69■■■□□ 2.18
HDAC2-207ENST00000520170 SBF2Q86WG5 1849 aa28.69■■■□□ 2.18
HDAC2-207ENST00000520170 AKAP12Q02952 1782 aa28.68■■■□□ 2.18
HDAC2-207ENST00000520170 C11orf95C9JLR9 678 aaPredicted RBP28.68■■■□□ 2.18
HDAC2-207ENST00000520170 SOX12O15370 315 aa28.68■■■□□ 2.18
HDAC2-207ENST00000520170 TTC21BQ7Z4L5 1316 aa28.68■■■□□ 2.18
HDAC2-207ENST00000520170 DDB1Q16531 1140 aa28.67■■■□□ 2.18
HDAC2-207ENST00000520170 OVOS2A0A0G2JMS6 1433 aa28.67■■■□□ 2.18
HDAC2-207ENST00000520170 OVOS2A0A0J9YW53 1432 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms