RNA–Protein interactions for RNA: ENST00000520142.1

PABPC1-214, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-214ENST00000520142 CABLES1Q8TDN4 633 aa15.75■□□□□ 0.11
PABPC1-214ENST00000520142 BRD4O60885 1362 aaPredicted RBP15.75■□□□□ 0.11
PABPC1-214ENST00000520142 BCL9LQ86UU0 1499 aa15.74■□□□□ 0.11
PABPC1-214ENST00000520142 PUS7Q96PZ0 661 aaKnown RBP15.74■□□□□ 0.11
PABPC1-214ENST00000520142 ATAD2Q6PL18 1390 aa15.74■□□□□ 0.11
PABPC1-214ENST00000520142 SLIT2O94813 1529 aa15.73■□□□□ 0.11
PABPC1-214ENST00000520142 NGLY1Q96IV0 654 aa15.73■□□□□ 0.11
PABPC1-214ENST00000520142 USP6P35125 1406 aa15.73■□□□□ 0.11
PABPC1-214ENST00000520142 CPSF1Q10570 1443 aaKnown RBP15.73■□□□□ 0.11
PABPC1-214ENST00000520142 USP47Q96K76 1375 aa15.72■□□□□ 0.11
PABPC1-214ENST00000520142 CD163L1Q9NR16 1453 aa15.71■□□□□ 0.11
PABPC1-214ENST00000520142 ATRNO75882 1429 aa15.7■□□□□ 0.1
PABPC1-214ENST00000520142 PAK3O75914 559 aaPredicted RBP15.7■□□□□ 0.1
PABPC1-214ENST00000520142 LMOD2Q6P5Q4 547 aa15.7■□□□□ 0.1
PABPC1-214ENST00000520142 CDK12Q9NYV4 1490 aaPredicted RBP15.7■□□□□ 0.1
PABPC1-214ENST00000520142 AKAP12Q02952 1782 aa15.7■□□□□ 0.1
PABPC1-214ENST00000520142 QTRT2Q9H974 415 aaKnown RBP15.69■□□□□ 0.1
PABPC1-214ENST00000520142 USP21Q9UK80 565 aa15.69■□□□□ 0.1
PABPC1-214ENST00000520142 USP19O94966 1318 aa15.68■□□□□ 0.1
PABPC1-214ENST00000520142 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.68■□□□□ 0.1
PABPC1-214ENST00000520142 NRKQ7Z2Y5 1582 aa15.68■□□□□ 0.1
PABPC1-214ENST00000520142 FAM83GA6ND36 823 aa15.68■□□□□ 0.1
PABPC1-214ENST00000520142 SLC24A1O60721 1099 aa15.68■□□□□ 0.1
PABPC1-214ENST00000520142 ZNF692Q9BU19 519 aaPredicted RBP15.68■□□□□ 0.1
PABPC1-214ENST00000520142 PHRF1Q9P1Y6 1649 aaKnown RBP15.68■□□□□ 0.1
PABPC1-214ENST00000520142 RXRBP28702 533 aa15.67■□□□□ 0.1
PABPC1-214ENST00000520142 PLCH1Q4KWH8 1693 aa15.67■□□□□ 0.1
PABPC1-214ENST00000520142 MON2Q7Z3U7 1717 aa15.66■□□□□ 0.1
PABPC1-214ENST00000520142 NWD2Q9ULI1 1742 aa15.66■□□□□ 0.1
PABPC1-214ENST00000520142 RBM6P78332 1123 aaKnown RBP15.66■□□□□ 0.1
PABPC1-214ENST00000520142 ABTB2Q8N961 1025 aa15.66■□□□□ 0.1
PABPC1-214ENST00000520142 TRPC5Q9UL62 973 aaPredicted RBP15.66■□□□□ 0.1
PABPC1-214ENST00000520142 PIK3C2AO00443 1686 aa15.65■□□□□ 0.1
PABPC1-214ENST00000520142 UNC5CLQ8IV45 518 aa15.65■□□□□ 0.1
PABPC1-214ENST00000520142 SLC12A5Q9H2X9 1139 aa15.65■□□□□ 0.1
PABPC1-214ENST00000520142 TTC21BQ7Z4L5 1316 aa15.65■□□□□ 0.1
PABPC1-214ENST00000520142 SLIT3O75094 1523 aa15.64■□□□□ 0.09
PABPC1-214ENST00000520142 NUTM2GQ5VZR2 741 aa15.64■□□□□ 0.09
PABPC1-214ENST00000520142 COL14A1Q05707 1796 aaKnown RBP15.64■□□□□ 0.09
PABPC1-214ENST00000520142 CPDO75976 1380 aa15.63■□□□□ 0.09
PABPC1-214ENST00000520142 KTN1Q86UP2 1357 aaKnown RBP15.63■□□□□ 0.09
PABPC1-214ENST00000520142 NRAPQ86VF7 1730 aa15.63■□□□□ 0.09
PABPC1-214ENST00000520142 RGS12O14924 1447 aa15.63■□□□□ 0.09
PABPC1-214ENST00000520142 PLEKHG5O94827 1062 aa15.63■□□□□ 0.09
PABPC1-214ENST00000520142 HAP1P54257 671 aaPredicted RBP15.63■□□□□ 0.09
PABPC1-214ENST00000520142 NLRP13Q86W25 1043 aa15.63■□□□□ 0.09
PABPC1-214ENST00000520142 TTC21AQ8NDW8 1320 aa15.63■□□□□ 0.09
PABPC1-214ENST00000520142 KIAA0232Q92628 1395 aa15.62■□□□□ 0.09
PABPC1-214ENST00000520142 NINLQ9Y2I6 1382 aa15.62■□□□□ 0.09
PABPC1-214ENST00000520142 GJD4Q96KN9 370 aaPredicted RBP15.62■□□□□ 0.09
PABPC1-214ENST00000520142 GLI3P10071 1580 aa15.62■□□□□ 0.09
PABPC1-214ENST00000520142 A0A1W2PP64 1363 aa15.62■□□□□ 0.09
PABPC1-214ENST00000520142 GCP02774 474 aa15.61■□□□□ 0.09
PABPC1-214ENST00000520142 TMF1P82094 1093 aa15.61■□□□□ 0.09
PABPC1-214ENST00000520142 VPS72Q15906 364 aa15.61■□□□□ 0.09
PABPC1-214ENST00000520142 USP31Q70CQ4 1352 aa15.61■□□□□ 0.09
PABPC1-214ENST00000520142 USP54Q70EL1 1684 aa15.6■□□□□ 0.09
PABPC1-214ENST00000520142 NLRP6P59044 892 aa15.6■□□□□ 0.09
PABPC1-214ENST00000520142 TMC1Q8TDI8 760 aa15.6■□□□□ 0.09
PABPC1-214ENST00000520142 LMO7Q8WWI1 1683 aa15.6■□□□□ 0.09
PABPC1-214ENST00000520142 BTG4Q9NY30 223 aa15.59■□□□□ 0.09
PABPC1-214ENST00000520142 EDC4Q6P2E9 1401 aaKnown RBP15.59■□□□□ 0.09
PABPC1-214ENST00000520142 ONECUT3O60422 494 aaPredicted RBP15.58■□□□□ 0.08
PABPC1-214ENST00000520142 ZC3H6P61129 1189 aaKnown RBP15.58■□□□□ 0.08
PABPC1-214ENST00000520142 PRDM11Q9NQV5 511 aa15.58■□□□□ 0.08
PABPC1-214ENST00000520142 TERF2IPQ9NYB0 399 aa15.58■□□□□ 0.08
PABPC1-214ENST00000520142 HDGFL2Q7Z4V5 671 aaPredicted RBP15.57■□□□□ 0.08
PABPC1-214ENST00000520142 ANKRD36BQ8N2N9 1353 aa15.57■□□□□ 0.08
PABPC1-214ENST00000520142 CAMTA1Q9Y6Y1 1673 aa15.57■□□□□ 0.08
PABPC1-214ENST00000520142 HSPA5P11021 654 aaKnown RBP15.56■□□□□ 0.08
PABPC1-214ENST00000520142 EIF4G2P78344 907 aaKnown RBP eCLIP15.56■□□□□ 0.08
PABPC1-214ENST00000520142 CHRNA2Q15822 529 aa15.56■□□□□ 0.08
PABPC1-214ENST00000520142 CDCA8Q53HL2 280 aa15.56■□□□□ 0.08
PABPC1-214ENST00000520142 NFAT5O94916 1531 aa15.56■□□□□ 0.08
PABPC1-214ENST00000520142 COL18A1P39060 1754 aa15.55■□□□□ 0.08
PABPC1-214ENST00000520142 MYOM1P52179 1685 aa15.55■□□□□ 0.08
PABPC1-214ENST00000520142 NME9Q86XW9 330 aa15.55■□□□□ 0.08
PABPC1-214ENST00000520142 ZRANB1Q9UGI0 708 aa15.55■□□□□ 0.08
PABPC1-214ENST00000520142 OVOS2A0A0J9YW53 1432 aa15.54■□□□□ 0.08
PABPC1-214ENST00000520142 OVOS2Q6IE36 1432 aa15.54■□□□□ 0.08
PABPC1-214ENST00000520142 AATKQ6ZMQ8 1374 aa15.54■□□□□ 0.08
PABPC1-214ENST00000520142 SPATA31A5Q5VU36 1347 aa15.54■□□□□ 0.08
PABPC1-214ENST00000520142 SPATA31A7Q8IWB4 1347 aa15.54■□□□□ 0.08
PABPC1-214ENST00000520142 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.54■□□□□ 0.08
PABPC1-214ENST00000520142 ARHGEF25Q86VW2 580 aa15.53■□□□□ 0.08
PABPC1-214ENST00000520142 KCNH5Q8NCM2 988 aa15.53■□□□□ 0.08
PABPC1-214ENST00000520142 CARD14Q9BXL6 1004 aa15.51■□□□□ 0.07
PABPC1-214ENST00000520142 COL5A2P05997 1499 aaPredicted RBP15.51■□□□□ 0.07
PABPC1-214ENST00000520142 SPATA31A1Q5TZJ5 1347 aa15.5■□□□□ 0.07
PABPC1-214ENST00000520142 AXIN2Q9Y2T1 843 aa15.5■□□□□ 0.07
PABPC1-214ENST00000520142 ABCC6O95255 1503 aa15.49■□□□□ 0.07
PABPC1-214ENST00000520142 THSD7AQ9UPZ6 1657 aa15.49■□□□□ 0.07
PABPC1-214ENST00000520142 C11orf95C9JLR9 678 aaPredicted RBP15.49■□□□□ 0.07
PABPC1-214ENST00000520142 UPF1Q92900 1129 aaKnown RBP eCLIP15.49■□□□□ 0.07
PABPC1-214ENST00000520142 FYB1O15117 783 aa15.48■□□□□ 0.07
PABPC1-214ENST00000520142 LARP1Q6PKG0 1096 aaKnown RBP15.48■□□□□ 0.07
PABPC1-214ENST00000520142 SEPT12Q8IYM1 358 aa15.48■□□□□ 0.07
PABPC1-214ENST00000520142 BRWD3Q6RI45 1802 aa15.47■□□□□ 0.07
PABPC1-214ENST00000520142 FAM98CQ17RN3 349 aaKnown RBP15.46■□□□□ 0.07
PABPC1-214ENST00000520142 STRN4Q9NRL3 753 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms