RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 RCAN3Q9UKA8 241 aa35.55■■■■□ 3.28
COL13A1-212ENST00000520133 COL3A1P02461 1466 aaPredicted RBP35.52■■■■□ 3.28
COL13A1-212ENST00000520133 MAP2P11137 1827 aaKnown RBP35.52■■■■□ 3.28
COL13A1-212ENST00000520133 U2AF1L5P0DN76 240 aaPredicted RBP35.5■■■■□ 3.27
COL13A1-212ENST00000520133 U2AF1Q01081 240 aaKnown RBP eCLIP35.5■■■■□ 3.27
COL13A1-212ENST00000520133 NME9Q86XW9 330 aa35.5■■■■□ 3.27
COL13A1-212ENST00000520133 ACEP12821 1306 aa35.5■■■■□ 3.27
COL13A1-212ENST00000520133 NUTM2FA1L443 756 aa35.49■■■■□ 3.27
COL13A1-212ENST00000520133 PNPLA6Q8IY17 1366 aa35.49■■■■□ 3.27
COL13A1-212ENST00000520133 COG3Q96JB2 828 aa35.48■■■■□ 3.27
COL13A1-212ENST00000520133 PPP4R2Q9NY27 417 aa35.48■■■■□ 3.27
COL13A1-212ENST00000520133 NRKQ7Z2Y5 1582 aa35.47■■■■□ 3.27
COL13A1-212ENST00000520133 NPHP4O75161 1426 aaPredicted RBP35.46■■■■□ 3.27
COL13A1-212ENST00000520133 NKTRP30414 1462 aaKnown RBP35.46■■■■□ 3.27
COL13A1-212ENST00000520133 IQSEC2Q5JU85 1478 aa35.44■■■■□ 3.26
COL13A1-212ENST00000520133 AATKQ6ZMQ8 1374 aa35.44■■■■□ 3.26
COL13A1-212ENST00000520133 RGPD8O14715 1765 aaPredicted RBP35.44■■■■□ 3.26
COL13A1-212ENST00000520133 USP6P35125 1406 aa35.44■■■■□ 3.26
COL13A1-212ENST00000520133 ANKARQ7Z5J8 1434 aa35.44■■■■□ 3.26
COL13A1-212ENST00000520133 DIAPH1O60610 1272 aaKnown RBP35.43■■■■□ 3.26
COL13A1-212ENST00000520133 SLFN5Q08AF3 891 aa35.43■■■■□ 3.26
COL13A1-212ENST00000520133 DUSP27Q5VZP5 1158 aa35.43■■■■□ 3.26
COL13A1-212ENST00000520133 POLKQ9UBT6 870 aa35.43■■■■□ 3.26
COL13A1-212ENST00000520133 TTC21BQ7Z4L5 1316 aa35.42■■■■□ 3.26
COL13A1-212ENST00000520133 TCP11L2Q8N4U5 519 aa35.42■■■■□ 3.26
COL13A1-212ENST00000520133 U2SURPO15042 1029 aaKnown RBP35.41■■■■□ 3.26
COL13A1-212ENST00000520133 RRP1P56182 461 aaKnown RBP35.41■■■■□ 3.26
COL13A1-212ENST00000520133 NCBP3Q53F19 620 aaKnown RBP35.41■■■■□ 3.26
COL13A1-212ENST00000520133 FMN2Q9NZ56 1722 aa35.41■■■■□ 3.26
COL13A1-212ENST00000520133 E9PSI1 815 aa35.39■■■■□ 3.26
COL13A1-212ENST00000520133 TRMT2AQ8IZ69 625 aaKnown RBP35.38■■■■□ 3.25
COL13A1-212ENST00000520133 WWC1Q8IX03 1113 aa35.37■■■■□ 3.25
COL13A1-212ENST00000520133 PNNQ9H307 717 aaKnown RBP35.37■■■■□ 3.25
COL13A1-212ENST00000520133 ZRANB1Q9UGI0 708 aa35.37■■■■□ 3.25
COL13A1-212ENST00000520133 PPM1GO15355 546 aaPredicted RBP35.35■■■■□ 3.25
COL13A1-212ENST00000520133 CDK12Q9NYV4 1490 aaPredicted RBP35.35■■■■□ 3.25
COL13A1-212ENST00000520133 NALCNQ8IZF0 1738 aa35.35■■■■□ 3.25
COL13A1-212ENST00000520133 CCDC27Q2M243 656 aa35.34■■■■□ 3.25
COL13A1-212ENST00000520133 NGDNQ8NEJ9 315 aaKnown RBP35.34■■■■□ 3.25
COL13A1-212ENST00000520133 PMFBP1Q8TBY8 1022 aa35.34■■■■□ 3.25
COL13A1-212ENST00000520133 TTC21AQ8NDW8 1320 aa35.33■■■■□ 3.25
COL13A1-212ENST00000520133 SSH2Q76I76 1423 aa35.33■■■■□ 3.25
COL13A1-212ENST00000520133 FBLN1P23142 703 aa35.32■■■■□ 3.25
COL13A1-212ENST00000520133 NEUROD2Q15784 382 aa35.32■■■■□ 3.25
COL13A1-212ENST00000520133 PHF23Q9BUL5 403 aaPredicted RBP35.32■■■■□ 3.24
COL13A1-212ENST00000520133 OVOS2A0A0J9YW53 1432 aa35.31■■■■□ 3.24
COL13A1-212ENST00000520133 OVOS2Q6IE36 1432 aa35.31■■■■□ 3.24
COL13A1-212ENST00000520133 RRP7AQ9Y3A4 280 aaKnown RBP35.3■■■■□ 3.24
COL13A1-212ENST00000520133 EMILIN1Q9Y6C2 1016 aa35.3■■■■□ 3.24
COL13A1-212ENST00000520133 PLEKHF1Q96S99 279 aa35.29■■■■□ 3.24
COL13A1-212ENST00000520133 MAPK8IP3Q9UPT6 1336 aa35.29■■■■□ 3.24
COL13A1-212ENST00000520133 WDR63Q8IWG1 891 aa35.29■■■■□ 3.24
COL13A1-212ENST00000520133 SPINK5Q9NQ38 1064 aaPredicted RBP35.27■■■■□ 3.24
COL13A1-212ENST00000520133 FCHSD2O94868 740 aa35.26■■■■□ 3.24
COL13A1-212ENST00000520133 ADGRL3Q9HAR2 1447 aa35.26■■■■□ 3.23
COL13A1-212ENST00000520133 NWD1Q149M9 1564 aa35.25■■■■□ 3.23
COL13A1-212ENST00000520133 DMRT2Q9Y5R5 561 aa35.23■■■■□ 3.23
COL13A1-212ENST00000520133 RRS1Q15050 365 aaKnown RBP35.22■■■■□ 3.23
COL13A1-212ENST00000520133 USP31Q70CQ4 1352 aa35.22■■■■□ 3.23
COL13A1-212ENST00000520133 NEFMP07197 916 aa35.2■■■■□ 3.23
COL13A1-212ENST00000520133 IL13P35225 146 aa35.19■■■■□ 3.22
COL13A1-212ENST00000520133 TMPOP42166 694 aaKnown RBP35.19■■■■□ 3.22
COL13A1-212ENST00000520133 LRRC7Q96NW7 1537 aa35.18■■■■□ 3.22
COL13A1-212ENST00000520133 B4GALNT3Q6L9W6 998 aa35.18■■■■□ 3.22
COL13A1-212ENST00000520133 GOLGA6L2Q8N9W4 650 aaPredicted RBP35.16■■■■□ 3.22
COL13A1-212ENST00000520133 RSPH6AQ9H0K4 717 aa35.16■■■■□ 3.22
COL13A1-212ENST00000520133 C14orf37Q86TY3 774 aa35.15■■■■□ 3.22
COL13A1-212ENST00000520133 RBM33Q96EV2 1170 aaKnown RBP35.14■■■■□ 3.22
COL13A1-212ENST00000520133 PHF8Q9UPP1 1060 aa35.14■■■■□ 3.22
COL13A1-212ENST00000520133 PIK3C2AO00443 1686 aa35.14■■■■□ 3.22
COL13A1-212ENST00000520133 PRKAR2BP31323 418 aa35.12■■■■□ 3.21
COL13A1-212ENST00000520133 MYH16Q9H6N6 1097 aa35.12■■■■□ 3.21
COL13A1-212ENST00000520133 PLIN1O60240 522 aa35.11■■■■□ 3.21
COL13A1-212ENST00000520133 CCDC136Q96JN2 1154 aa35.11■■■■□ 3.21
COL13A1-212ENST00000520133 RIPK4P57078 832 aa35.09■■■■□ 3.21
COL13A1-212ENST00000520133 USP54Q70EL1 1684 aa35.08■■■■□ 3.21
COL13A1-212ENST00000520133 EXOC6Q8TAG9 804 aa35.08■■■■□ 3.21
COL13A1-212ENST00000520133 HMOX1P09601 288 aa35.07■■■■□ 3.2
COL13A1-212ENST00000520133 PROSER2Q86WR7 435 aaPredicted RBP35.07■■■■□ 3.2
COL13A1-212ENST00000520133 TRIM35Q9UPQ4 493 aa35.07■■■■□ 3.2
COL13A1-212ENST00000520133 NLRP6P59044 892 aa35.06■■■■□ 3.2
COL13A1-212ENST00000520133 PEAK1Q9H792 1746 aa35.05■■■■□ 3.2
COL13A1-212ENST00000520133 IL16Q14005 1332 aa35.05■■■■□ 3.2
COL13A1-212ENST00000520133 ESCO1Q5FWF5 840 aa35.04■■■■□ 3.2
COL13A1-212ENST00000520133 EIF4A2Q14240 407 aaKnown RBP35.02■■■■□ 3.2
COL13A1-212ENST00000520133 SOX12O15370 315 aa35.02■■■■□ 3.2
COL13A1-212ENST00000520133 PAK3O75914 559 aaPredicted RBP35.01■■■■□ 3.19
COL13A1-212ENST00000520133 ABTB2Q8N961 1025 aa35.01■■■■□ 3.19
COL13A1-212ENST00000520133 SBNO1A3KN83 1393 aa35.01■■■■□ 3.19
COL13A1-212ENST00000520133 MAP3K19Q56UN5 1328 aa35■■■■□ 3.19
COL13A1-212ENST00000520133 NFE2L2Q16236 605 aa35■■■■□ 3.19
COL13A1-212ENST00000520133 MARF1Q9Y4F3 1742 aaKnown RBP35■■■■□ 3.19
COL13A1-212ENST00000520133 FLT4P35916 1363 aa34.99■■■■□ 3.19
COL13A1-212ENST00000520133 HSP90AB2PQ58FF8 381 aa34.97■■■■□ 3.19
COL13A1-212ENST00000520133 PHACTR3Q96KR7 559 aa34.97■■■■□ 3.19
COL13A1-212ENST00000520133 PSME1Q06323 249 aa34.97■■■■□ 3.19
COL13A1-212ENST00000520133 CRBNQ96SW2 442 aa34.97■■■■□ 3.19
COL13A1-212ENST00000520133 C19orf44Q9H6X5 657 aa34.96■■■■□ 3.19
COL13A1-212ENST00000520133 BCAR3O75815 825 aa34.95■■■■□ 3.19
COL13A1-212ENST00000520133 KIF24Q5T7B8 1368 aa34.95■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms