RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 ILDR2Q71H61 639 aa25.85■■□□□ 1.73
SREK1-207ENST00000520058 PUS7Q96PZ0 661 aaKnown RBP25.84■■□□□ 1.73
SREK1-207ENST00000520058 ZNF692Q9BU19 519 aaPredicted RBP25.84■■□□□ 1.73
SREK1-207ENST00000520058 AKAP12Q02952 1782 aa25.84■■□□□ 1.73
SREK1-207ENST00000520058 PLEKHG5O94827 1062 aa25.82■■□□□ 1.72
SREK1-207ENST00000520058 TMF1P82094 1093 aa25.8■■□□□ 1.72
SREK1-207ENST00000520058 ABTB2Q8N961 1025 aa25.8■■□□□ 1.72
SREK1-207ENST00000520058 CDCA8Q53HL2 280 aa25.79■■□□□ 1.72
SREK1-207ENST00000520058 POTEAQ6S8J7 498 aa25.79■■□□□ 1.72
SREK1-207ENST00000520058 TMC1Q8TDI8 760 aa25.79■■□□□ 1.72
SREK1-207ENST00000520058 CABLES1Q8TDN4 633 aa25.79■■□□□ 1.72
SREK1-207ENST00000520058 USP21Q9UK80 565 aa25.79■■□□□ 1.72
SREK1-207ENST00000520058 TESK2Q96S53 571 aa25.78■■□□□ 1.72
SREK1-207ENST00000520058 USP6P35125 1406 aa25.78■■□□□ 1.72
SREK1-207ENST00000520058 HDGFL2Q7Z4V5 671 aaPredicted RBP25.76■■□□□ 1.71
SREK1-207ENST00000520058 NLRP13Q86W25 1043 aa25.76■■□□□ 1.71
SREK1-207ENST00000520058 FNBP4Q8N3X1 1017 aaPredicted RBP25.76■■□□□ 1.71
SREK1-207ENST00000520058 CRYBG1Q9Y4K1 1723 aa25.75■■□□□ 1.71
SREK1-207ENST00000520058 NINLQ9Y2I6 1382 aa25.75■■□□□ 1.71
SREK1-207ENST00000520058 RXRBP28702 533 aa25.75■■□□□ 1.71
SREK1-207ENST00000520058 TERF2IPQ9NYB0 399 aa25.75■■□□□ 1.71
SREK1-207ENST00000520058 MON2Q7Z3U7 1717 aa25.74■■□□□ 1.71
SREK1-207ENST00000520058 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.74■■□□□ 1.71
SREK1-207ENST00000520058 NWD2Q9ULI1 1742 aa25.74■■□□□ 1.71
SREK1-207ENST00000520058 KTN1Q86UP2 1357 aaKnown RBP25.74■■□□□ 1.71
SREK1-207ENST00000520058 QTRT2Q9H974 415 aaKnown RBP25.74■■□□□ 1.71
SREK1-207ENST00000520058 TRPC5Q9UL62 973 aaPredicted RBP25.74■■□□□ 1.71
SREK1-207ENST00000520058 PHRF1Q9P1Y6 1649 aaKnown RBP25.74■■□□□ 1.71
SREK1-207ENST00000520058 PLCH1Q4KWH8 1693 aa25.72■■□□□ 1.71
SREK1-207ENST00000520058 EIF4G2P78344 907 aaKnown RBP eCLIP25.72■■□□□ 1.71
SREK1-207ENST00000520058 COL14A1Q05707 1796 aaKnown RBP25.72■■□□□ 1.71
SREK1-207ENST00000520058 NUTM2GQ5VZR2 741 aa25.71■■□□□ 1.71
SREK1-207ENST00000520058 CPSF1Q10570 1443 aaKnown RBP25.71■■□□□ 1.71
SREK1-207ENST00000520058 TTC21AQ8NDW8 1320 aa25.7■■□□□ 1.71
SREK1-207ENST00000520058 SOCS7O14512 581 aa25.69■■□□□ 1.7
SREK1-207ENST00000520058 RBM6P78332 1123 aaKnown RBP25.69■■□□□ 1.7
SREK1-207ENST00000520058 NLRP6P59044 892 aa25.68■■□□□ 1.7
SREK1-207ENST00000520058 NRKQ7Z2Y5 1582 aa25.67■■□□□ 1.7
SREK1-207ENST00000520058 UNC5CLQ8IV45 518 aa25.67■■□□□ 1.7
SREK1-207ENST00000520058 SLC12A5Q9H2X9 1139 aa25.67■■□□□ 1.7
SREK1-207ENST00000520058 PRDM11Q9NQV5 511 aa25.67■■□□□ 1.7
SREK1-207ENST00000520058 SLIT2O94813 1529 aa25.67■■□□□ 1.7
SREK1-207ENST00000520058 TTC21BQ7Z4L5 1316 aa25.66■■□□□ 1.7
SREK1-207ENST00000520058 BCL9LQ86UU0 1499 aa25.66■■□□□ 1.7
SREK1-207ENST00000520058 PIK3C2AO00443 1686 aa25.65■■□□□ 1.7
SREK1-207ENST00000520058 SSH2Q76I76 1423 aa25.65■■□□□ 1.7
SREK1-207ENST00000520058 CDK12Q9NYV4 1490 aaPredicted RBP25.65■■□□□ 1.7
SREK1-207ENST00000520058 FAM83GA6ND36 823 aa25.64■■□□□ 1.7
SREK1-207ENST00000520058 ATRNO75882 1429 aa25.63■■□□□ 1.69
SREK1-207ENST00000520058 USP19O94966 1318 aa25.63■■□□□ 1.69
SREK1-207ENST00000520058 EDC4Q6P2E9 1401 aaKnown RBP25.62■■□□□ 1.69
SREK1-207ENST00000520058 ZC3H6P61129 1189 aaKnown RBP25.61■■□□□ 1.69
SREK1-207ENST00000520058 KCNH5Q8NCM2 988 aa25.61■■□□□ 1.69
SREK1-207ENST00000520058 CD163L1Q9NR16 1453 aa25.6■■□□□ 1.69
SREK1-207ENST00000520058 A0A1W2PP64 1363 aa25.6■■□□□ 1.69
SREK1-207ENST00000520058 KIAA0232Q92628 1395 aa25.6■■□□□ 1.69
SREK1-207ENST00000520058 GCP02774 474 aa25.6■■□□□ 1.69
SREK1-207ENST00000520058 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.6■■□□□ 1.69
SREK1-207ENST00000520058 BTG4Q9NY30 223 aa25.6■■□□□ 1.69
SREK1-207ENST00000520058 CCDC9Q9Y3X0 531 aaKnown RBP25.6■■□□□ 1.69
SREK1-207ENST00000520058 HSPA5P11021 654 aaKnown RBP25.59■■□□□ 1.69
SREK1-207ENST00000520058 NRAPQ86VF7 1730 aa25.58■■□□□ 1.69
SREK1-207ENST00000520058 GJD4Q96KN9 370 aaPredicted RBP25.58■■□□□ 1.69
SREK1-207ENST00000520058 ANKRD36BQ8N2N9 1353 aa25.57■■□□□ 1.68
SREK1-207ENST00000520058 SLIT3O75094 1523 aa25.57■■□□□ 1.68
SREK1-207ENST00000520058 CPDO75976 1380 aa25.56■■□□□ 1.68
SREK1-207ENST00000520058 VPS72Q15906 364 aa25.56■■□□□ 1.68
SREK1-207ENST00000520058 USP54Q70EL1 1684 aa25.55■■□□□ 1.68
SREK1-207ENST00000520058 POLR3GLQ9BT43 218 aa25.54■■□□□ 1.68
SREK1-207ENST00000520058 EVA1CP58658 441 aa25.53■■□□□ 1.68
SREK1-207ENST00000520058 CHRNA2Q15822 529 aa25.53■■□□□ 1.68
SREK1-207ENST00000520058 MYOM1P52179 1685 aa25.52■■□□□ 1.68
SREK1-207ENST00000520058 ZBTB7CA1YPR0 619 aa25.52■■□□□ 1.68
SREK1-207ENST00000520058 USP31Q70CQ4 1352 aa25.52■■□□□ 1.68
SREK1-207ENST00000520058 NME9Q86XW9 330 aa25.5■■□□□ 1.67
SREK1-207ENST00000520058 KIF20BQ96Q89 1820 aa25.5■■□□□ 1.67
SREK1-207ENST00000520058 GLI3P10071 1580 aa25.49■■□□□ 1.67
SREK1-207ENST00000520058 RGS12O14924 1447 aa25.49■■□□□ 1.67
SREK1-207ENST00000520058 STRN4Q9NRL3 753 aa25.49■■□□□ 1.67
SREK1-207ENST00000520058 SOX12O15370 315 aa25.48■■□□□ 1.67
SREK1-207ENST00000520058 LTN1O94822 1766 aa25.48■■□□□ 1.67
SREK1-207ENST00000520058 LMO7Q8WWI1 1683 aa25.48■■□□□ 1.67
SREK1-207ENST00000520058 COG3Q96JB2 828 aa25.47■■□□□ 1.67
SREK1-207ENST00000520058 AATKQ6ZMQ8 1374 aa25.45■■□□□ 1.67
SREK1-207ENST00000520058 RGPD5Q99666 1765 aa25.45■■□□□ 1.66
SREK1-207ENST00000520058 A0A0G2JS52 829 aa25.44■■□□□ 1.66
SREK1-207ENST00000520058 MYT1Q01538 1121 aa25.44■■□□□ 1.66
SREK1-207ENST00000520058 CAMTA1Q9Y6Y1 1673 aa25.44■■□□□ 1.66
SREK1-207ENST00000520058 ARHGEF25Q86VW2 580 aa25.43■■□□□ 1.66
SREK1-207ENST00000520058 NFAT5O94916 1531 aa25.42■■□□□ 1.66
SREK1-207ENST00000520058 ABCC6O95255 1503 aa25.42■■□□□ 1.66
SREK1-207ENST00000520058 SPATA31A5Q5VU36 1347 aa25.42■■□□□ 1.66
SREK1-207ENST00000520058 SPATA31A7Q8IWB4 1347 aa25.42■■□□□ 1.66
SREK1-207ENST00000520058 COL18A1P39060 1754 aa25.42■■□□□ 1.66
SREK1-207ENST00000520058 ZRANB1Q9UGI0 708 aa25.42■■□□□ 1.66
SREK1-207ENST00000520058 BRWD3Q6RI45 1802 aa25.42■■□□□ 1.66
SREK1-207ENST00000520058 OVOS2A0A0J9YW53 1432 aa25.41■■□□□ 1.66
SREK1-207ENST00000520058 OVOS2Q6IE36 1432 aa25.41■■□□□ 1.66
SREK1-207ENST00000520058 COL5A2P05997 1499 aaPredicted RBP25.4■■□□□ 1.66
SREK1-207ENST00000520058 ONECUT3O60422 494 aaPredicted RBP25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms